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CSPI03G26530 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G26530
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptioncyclic nucleotide-gated ion channel 1-like isoform X3
Genome locationChr3:23974599..23974964
RNA-Seq ExpressionCSPI03G26530
SyntenyCSPI03G26530
Gene Ontology termsGO:0034220 - ion transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005216 - ion channel activity (molecular function)
InterPro domainsIPR000595 - Cyclic nucleotide-binding domain
IPR014710 - RmlC-like jelly roll fold
IPR018490 - Cyclic nucleotide-binding-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050470.1 cyclic nucleotide-gated ion channel 1-like isoform X3 [Cucumis melo var. makuwa]1.8e-4688.39Show/hide
Query:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTINTFGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQMEA
        MLKEFEEEK+EEMMKDMK MVF EQSYIIREGEPIEQMLLFTKGMGLTFS+S GTRTTIN FGKGDLFGEQLLNWA+ NL VSEIPLS+CT KTQTQMEA
Subjt:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTINTFGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQMEA

Query:  FALKAIDPRYHT
        FALKAID +YHT
Subjt:  FALKAIDPRYHT

KAA0061693.1 cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo var. makuwa]2.5e-4883.61Show/hide
Query:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTINTFGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQMEA
        MLKEFEEEK++EMMKDMKPMVF EQSYIIREGEP+EQMLLFTKGMGLTFS+S GTRTTIN FGKGDLFGEQLL WA ENL VSEIPLS+CT K  TQMEA
Subjt:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTINTFGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQMEA

Query:  FALKAIDPRYHTS-GRHTYRLS
        FALKAIDP+YHT    +TYRLS
Subjt:  FALKAIDPRYHTS-GRHTYRLS

XP_008449547.1 PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo]2.5e-4883.61Show/hide
Query:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTINTFGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQMEA
        MLKEFEEEK++EMMKDMKPMVF EQSYIIREGEP+EQMLLFTKGMGLTFS+S GTRTTIN FGKGDLFGEQLL WA ENL VSEIPLS+CT K  TQMEA
Subjt:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTINTFGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQMEA

Query:  FALKAIDPRYHTS-GRHTYRLS
        FALKAIDP+YHT    +TYRLS
Subjt:  FALKAIDPRYHTS-GRHTYRLS

XP_016900693.1 PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X2 [Cucumis melo]2.5e-4883.61Show/hide
Query:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTINTFGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQMEA
        MLKEFEEEK++EMMKDMKPMVF EQSYIIREGEP+EQMLLFTKGMGLTFS+S GTRTTIN FGKGDLFGEQLL WA ENL VSEIPLS+CT K  TQMEA
Subjt:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTINTFGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQMEA

Query:  FALKAIDPRYHTS-GRHTYRLS
        FALKAIDP+YHT    +TYRLS
Subjt:  FALKAIDPRYHTS-GRHTYRLS

XP_016900694.1 PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X3 [Cucumis melo]2.5e-4883.61Show/hide
Query:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTINTFGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQMEA
        MLKEFEEEK++EMMKDMKPMVF EQSYIIREGEP+EQMLLFTKGMGLTFS+S GTRTTIN FGKGDLFGEQLL WA ENL VSEIPLS+CT K  TQMEA
Subjt:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTINTFGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQMEA

Query:  FALKAIDPRYHTS-GRHTYRLS
        FALKAIDP+YHT    +TYRLS
Subjt:  FALKAIDPRYHTS-GRHTYRLS

TrEMBL top hitse value%identityAlignment
A0A1S3BLM4 cyclic nucleotide-gated ion channel 1-like isoform X11.2e-4883.61Show/hide
Query:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTINTFGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQMEA
        MLKEFEEEK++EMMKDMKPMVF EQSYIIREGEP+EQMLLFTKGMGLTFS+S GTRTTIN FGKGDLFGEQLL WA ENL VSEIPLS+CT K  TQMEA
Subjt:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTINTFGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQMEA

Query:  FALKAIDPRYHTS-GRHTYRLS
        FALKAIDP+YHT    +TYRLS
Subjt:  FALKAIDPRYHTS-GRHTYRLS

A0A1S4DXJ0 cyclic nucleotide-gated ion channel 1-like isoform X21.2e-4883.61Show/hide
Query:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTINTFGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQMEA
        MLKEFEEEK++EMMKDMKPMVF EQSYIIREGEP+EQMLLFTKGMGLTFS+S GTRTTIN FGKGDLFGEQLL WA ENL VSEIPLS+CT K  TQMEA
Subjt:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTINTFGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQMEA

Query:  FALKAIDPRYHTS-GRHTYRLS
        FALKAIDP+YHT    +TYRLS
Subjt:  FALKAIDPRYHTS-GRHTYRLS

A0A1S4DYA3 cyclic nucleotide-gated ion channel 1-like isoform X31.2e-4883.61Show/hide
Query:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTINTFGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQMEA
        MLKEFEEEK++EMMKDMKPMVF EQSYIIREGEP+EQMLLFTKGMGLTFS+S GTRTTIN FGKGDLFGEQLL WA ENL VSEIPLS+CT K  TQMEA
Subjt:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTINTFGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQMEA

Query:  FALKAIDPRYHTS-GRHTYRLS
        FALKAIDP+YHT    +TYRLS
Subjt:  FALKAIDPRYHTS-GRHTYRLS

A0A5A7V0L3 Cyclic nucleotide-gated ion channel 1-like isoform X11.2e-4883.61Show/hide
Query:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTINTFGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQMEA
        MLKEFEEEK++EMMKDMKPMVF EQSYIIREGEP+EQMLLFTKGMGLTFS+S GTRTTIN FGKGDLFGEQLL WA ENL VSEIPLS+CT K  TQMEA
Subjt:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTINTFGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQMEA

Query:  FALKAIDPRYHTS-GRHTYRLS
        FALKAIDP+YHT    +TYRLS
Subjt:  FALKAIDPRYHTS-GRHTYRLS

A0A5D3DCD7 Cyclic nucleotide-gated ion channel 1-like isoform X21.2e-4883.61Show/hide
Query:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTINTFGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQMEA
        MLKEFEEEK++EMMKDMKPMVF EQSYIIREGEP+EQMLLFTKGMGLTFS+S GTRTTIN FGKGDLFGEQLL WA ENL VSEIPLS+CT K  TQMEA
Subjt:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTINTFGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQMEA

Query:  FALKAIDPRYHTS-GRHTYRLS
        FALKAIDP+YHT    +TYRLS
Subjt:  FALKAIDPRYHTS-GRHTYRLS

SwissProt top hitse value%identityAlignment
O65717 Cyclic nucleotide-gated ion channel 15.9e-1634.62Show/hide
Query:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTINT--FGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQM
        M ++ +E+ ++ +   ++P+++ E+SYI+REG+P+++ML   +G  LT + + G    +N+   G GD  GE+LL WA++  S S +P+S  T +   ++
Subjt:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTINT--FGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQM

Query:  EAFALKAIDPRYHTSG---------RHTYR
        EAFALKA D ++  S          RHT+R
Subjt:  EAFALKAIDPRYHTSG---------RHTYR

O82226 Probable cyclic nucleotide-gated ion channel 65.7e-1132.17Show/hide
Query:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTIN--TFGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQM
        + +  +E  ++ + + +KP +F E+SY++REG+P+ +ML   +G   + +   G     N     +GD  G++LL WA++  S S +P S  T K  T++
Subjt:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTIN--TFGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQM

Query:  EAFALKAIDPRYHTS
        EAFAL A + ++  S
Subjt:  EAFALKAIDPRYHTS

Q9LD40 Putative cyclic nucleotide-gated ion channel 132.6e-1135.58Show/hide
Query:  EEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTINT--FGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQMEAFAL
        +E+ ++ +   +KP+++ E SY IREG+P+E+ML   +G  ++ + + G     N       D  GE LL WA++  S S  P+S  T +  T++EAFAL
Subjt:  EEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTINT--FGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQMEAFAL

Query:  KAID
         A D
Subjt:  KAID

Q9M0A4 Putative cyclic nucleotide-gated ion channel 97.5e-1132.17Show/hide
Query:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTIN--TFGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQM
        + +  +E  ++ + + +KP ++ E SY++REG+P+ +ML   +G   + +   G     N     +GD  GE+LL WA++  S S +P S  T K  T++
Subjt:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTIN--TFGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQM

Query:  EAFALKAIDPRYHTS
        EAFAL A + ++  S
Subjt:  EAFALKAIDPRYHTS

Q9S9N5 Putative cyclic nucleotide-gated ion channel 77.5e-1131.3Show/hide
Query:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTIN--TFGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQM
        +    +E  ++ + + +KP +F E +YI+REG+P+ +M+   +G   + +   G     N     +GD  GE+LL WA++  + S +P S  T K  T++
Subjt:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTIN--TFGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQM

Query:  EAFALKAIDPRYHTS
        EAFAL+A + ++  S
Subjt:  EAFALKAIDPRYHTS

Arabidopsis top hitse value%identityAlignment
AT1G15990.1 cyclic nucleotide gated channel 75.3e-1231.3Show/hide
Query:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTIN--TFGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQM
        +    +E  ++ + + +KP +F E +YI+REG+P+ +M+   +G   + +   G     N     +GD  GE+LL WA++  + S +P S  T K  T++
Subjt:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTIN--TFGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQM

Query:  EAFALKAIDPRYHTS
        EAFAL+A + ++  S
Subjt:  EAFALKAIDPRYHTS

AT2G23980.1 cyclic nucleotide-gated channel 64.1e-1232.17Show/hide
Query:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTIN--TFGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQM
        + +  +E  ++ + + +KP +F E+SY++REG+P+ +ML   +G   + +   G     N     +GD  G++LL WA++  S S +P S  T K  T++
Subjt:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTIN--TFGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQM

Query:  EAFALKAIDPRYHTS
        EAFAL A + ++  S
Subjt:  EAFALKAIDPRYHTS

AT4G01010.1 cyclic nucleotide-gated channel 131.8e-1235.58Show/hide
Query:  EEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTINT--FGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQMEAFAL
        +E+ ++ +   +KP+++ E SY IREG+P+E+ML   +G  ++ + + G     N       D  GE LL WA++  S S  P+S  T +  T++EAFAL
Subjt:  EEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTINT--FGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQMEAFAL

Query:  KAID
         A D
Subjt:  KAID

AT4G30560.1 cyclic nucleotide gated channel 95.3e-1232.17Show/hide
Query:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTIN--TFGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQM
        + +  +E  ++ + + +KP ++ E SY++REG+P+ +ML   +G   + +   G     N     +GD  GE+LL WA++  S S +P S  T K  T++
Subjt:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTIN--TFGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQM

Query:  EAFALKAIDPRYHTS
        EAFAL A + ++  S
Subjt:  EAFALKAIDPRYHTS

AT5G53130.1 cyclic nucleotide gated channel 14.2e-1734.62Show/hide
Query:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTINT--FGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQM
        M ++ +E+ ++ +   ++P+++ E+SYI+REG+P+++ML   +G  LT + + G    +N+   G GD  GE+LL WA++  S S +P+S  T +   ++
Subjt:  MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTINT--FGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQM

Query:  EAFALKAIDPRYHTSG---------RHTYR
        EAFALKA D ++  S          RHT+R
Subjt:  EAFALKAIDPRYHTSG---------RHTYR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTAAAGAATTTGAAGAGGAGAAGATAGAAGAGATGATGAAGGATATGAAGCCAATGGTTTTCGCAGAGCAAAGCTATATTATTCGAGAGGGGGAGCCTATTGAGCA
GATGCTATTGTTCACAAAAGGTATGGGATTGACATTTAGCGAGAGCAATGGAACCAGGACAACGATTAACACTTTTGGAAAAGGTGATTTGTTTGGAGAGCAACTACTGA
ATTGGGCAATGGAAAATCTTTCTGTATCTGAAATTCCTTTGTCCCAATGTACTTTCAAGACACAAACCCAAATGGAAGCCTTCGCTCTCAAGGCTATTGATCCACGATAT
CATACAAGTGGGAGACATACGTATAGGTTAAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTAAAGAATTTGAAGAGGAGAAGATAGAAGAGATGATGAAGGATATGAAGCCAATGGTTTTCGCAGAGCAAAGCTATATTATTCGAGAGGGGGAGCCTATTGAGCA
GATGCTATTGTTCACAAAAGGTATGGGATTGACATTTAGCGAGAGCAATGGAACCAGGACAACGATTAACACTTTTGGAAAAGGTGATTTGTTTGGAGAGCAACTACTGA
ATTGGGCAATGGAAAATCTTTCTGTATCTGAAATTCCTTTGTCCCAATGTACTTTCAAGACACAAACCCAAATGGAAGCCTTCGCTCTCAAGGCTATTGATCCACGATAT
CATACAAGTGGGAGACATACGTATAGGTTAAGTTAA
Protein sequenceShow/hide protein sequence
MLKEFEEEKIEEMMKDMKPMVFAEQSYIIREGEPIEQMLLFTKGMGLTFSESNGTRTTINTFGKGDLFGEQLLNWAMENLSVSEIPLSQCTFKTQTQMEAFALKAIDPRY
HTSGRHTYRLS