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CSPI03G26960 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G26960
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptiontetratricopeptide repeat protein 4 homolog
Genome locationChr3:24390704..24391338
RNA-Seq ExpressionCSPI03G26960
SyntenyCSPI03G26960
Gene Ontology termsGO:0051879 - Hsp90 protein binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2602023.1 tetratricopeptide repeat protein 4-like protein [Pyrus ussuriensis x Pyrus communis]1.3e-1979.63Show/hide
Query:  KGSSKWIKVHERRTLHDVLKEPNYIIPGIPVFYVVSRNSKFYKDFKAGRWVPPS
        KGSSKW+KV+E+RTLHDVLKEPN+I+PGIPVFYVVS+ S FYK+FKAG W PPS
Subjt:  KGSSKWIKVHERRTLHDVLKEPNYIIPGIPVFYVVSRNSKFYKDFKAGRWVPPS
XP_008447360.1 PREDICTED: tetratricopeptide repeat protein 4 homolog [Cucumis melo]6.7e-2492.86Show/hide
Query:  SDKGSSKWIKVHERRTLHDVLKEPNYIIPGIPVFYVVSRNSKFYKDFKAGRWVPPS
        ++KGSSKWIKVHERRTLH+VLKEPNYIIPGIPVFY+VSRNSKFYKDFKAGRWVPPS
Subjt:  SDKGSSKWIKVHERRTLHDVLKEPNYIIPGIPVFYVVSRNSKFYKDFKAGRWVPPS
XP_011651622.1 tetratricopeptide repeat protein 4 homolog [Cucumis sativus]7.9e-2596.43Show/hide
Query:  SDKGSSKWIKVHERRTLHDVLKEPNYIIPGIPVFYVVSRNSKFYKDFKAGRWVPPS
        ++KGSSKWIKVHERRTLHDVLKEPNYIIPGIPVFYVVSRNSKFYKDFKAGRWVPPS
Subjt:  SDKGSSKWIKVHERRTLHDVLKEPNYIIPGIPVFYVVSRNSKFYKDFKAGRWVPPS
XP_022159855.1 tetratricopeptide repeat protein 4 homolog isoform X1 [Momordica charantia]1.3e-1982.14Show/hide
Query:  SDKGSSKWIKVHERRTLHDVLKEPNYIIPGIPVFYVVSRNSKFYKDFKAGRWVPPS
        +++GSSKWIKV+E+RTLHDVLK PN +IPGIPVFYVV RNSKFYKDFKAGRW PPS
Subjt:  SDKGSSKWIKVHERRTLHDVLKEPNYIIPGIPVFYVVSRNSKFYKDFKAGRWVPPS
XP_022159856.1 tetratricopeptide repeat protein 4 homolog isoform X2 [Momordica charantia]1.3e-1982.14Show/hide
Query:  SDKGSSKWIKVHERRTLHDVLKEPNYIIPGIPVFYVVSRNSKFYKDFKAGRWVPPS
        +++GSSKWIKV+E+RTLHDVLK PN +IPGIPVFYVV RNSKFYKDFKAGRW PPS
Subjt:  SDKGSSKWIKVHERRTLHDVLKEPNYIIPGIPVFYVVSRNSKFYKDFKAGRWVPPS
TrEMBL top hitse value%identityAlignment
A0A0A0LC81 Uncharacterized protein3.0e-30100Show/hide
Query:  DLFALFFSDKGSSKWIKVHERRTLHDVLKEPNYIIPGIPVFYVVSRNSKFYKDFKAGRWVPPS
        DLFALFFSDKGSSKWIKVHERRTLHDVLKEPNYIIPGIPVFYVVSRNSKFYKDFKAGRWVPPS
Subjt:  DLFALFFSDKGSSKWIKVHERRTLHDVLKEPNYIIPGIPVFYVVSRNSKFYKDFKAGRWVPPS
A0A1S3BHV4 tetratricopeptide repeat protein 4 homolog3.2e-2492.86Show/hide
Query:  SDKGSSKWIKVHERRTLHDVLKEPNYIIPGIPVFYVVSRNSKFYKDFKAGRWVPPS
        ++KGSSKWIKVHERRTLH+VLKEPNYIIPGIPVFY+VSRNSKFYKDFKAGRWVPPS
Subjt:  SDKGSSKWIKVHERRTLHDVLKEPNYIIPGIPVFYVVSRNSKFYKDFKAGRWVPPS
A0A5N5FGL6 Tetratricopeptide repeat protein 4-like protein6.3e-2079.63Show/hide
Query:  KGSSKWIKVHERRTLHDVLKEPNYIIPGIPVFYVVSRNSKFYKDFKAGRWVPPS
        KGSSKW+KV+E+RTLHDVLKEPN+I+PGIPVFYVVS+ S FYK+FKAG W PPS
Subjt:  KGSSKWIKVHERRTLHDVLKEPNYIIPGIPVFYVVSRNSKFYKDFKAGRWVPPS
A0A6J1DZY6 tetratricopeptide repeat protein 4 homolog isoform X16.3e-2082.14Show/hide
Query:  SDKGSSKWIKVHERRTLHDVLKEPNYIIPGIPVFYVVSRNSKFYKDFKAGRWVPPS
        +++GSSKWIKV+E+RTLHDVLK PN +IPGIPVFYVV RNSKFYKDFKAGRW PPS
Subjt:  SDKGSSKWIKVHERRTLHDVLKEPNYIIPGIPVFYVVSRNSKFYKDFKAGRWVPPS
A0A6J1E576 tetratricopeptide repeat protein 4 homolog isoform X26.3e-2082.14Show/hide
Query:  SDKGSSKWIKVHERRTLHDVLKEPNYIIPGIPVFYVVSRNSKFYKDFKAGRWVPPS
        +++GSSKWIKV+E+RTLHDVLK PN +IPGIPVFYVV RNSKFYKDFKAGRW PPS
Subjt:  SDKGSSKWIKVHERRTLHDVLKEPNYIIPGIPVFYVVSRNSKFYKDFKAGRWVPPS
SwissProt top hitse value%identityAlignment
Q54M20 Tetratricopeptide repeat protein 4 homolog2.2e-0651.22Show/hide
Query:  KWIKVHERRTLHDVLKEPNYIIPGIPVFYVVSRNSKFYKDF
        KWI+V     +  V+  P YIIP IP+FY+VSR + FYK F
Subjt:  KWIKVHERRTLHDVLKEPNYIIPGIPVFYVVSRNSKFYKDF
Arabidopsis top hitse value%identityAlignment
AT1G04130.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.8e-2072.22Show/hide
Query:  KGSSKWIKVHERRTLHDVLKEPNYIIPGIPVFYVVSRNSKFYKDFKAGRWVPPS
        KGSS  +KV+ERRTLHDVLKEP ++IP IPVFY+VS+ SKFYKDF AG+W PP+
Subjt:  KGSSKWIKVHERRTLHDVLKEPNYIIPGIPVFYVVSRNSKFYKDFKAGRWVPPS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATTTATTTGCACTATTTTTTTCAGATAAAGGGTCTTCTAAATGGATCAAAGTTCATGAAAGGAGAACGCTTCACGACGTTCTAAAGGAGCCGAACTACATTATACCAGG
AATACCAGTCTTTTATGTTGTTTCAAGAAACTCAAAATTTTATAAAGATTTCAAAGCTGGGAGATGGGTTCCTCCCTCATAA
mRNA sequenceShow/hide mRNA sequence
GATTTATTTGCACTATTTTTTTCAGATAAAGGGTCTTCTAAATGGATCAAAGTTCATGAAAGGAGAACGCTTCACGACGTTCTAAAGGAGCCGAACTACATTATACCAGG
AATACCAGTCTTTTATGTTGTTTCAAGAAACTCAAAATTTTATAAAGATTTCAAAGCTGGGAGATGGGTTCCTCCCTCATAAGTTTATTGGATCAAGCAGAGCATATGCT
GTACCATTGTAAGTTCCATAGCAACTTTTTGCTTAGGTCAATGCTGGTTCTCTCAATCTTCTGTTATTTTTCAAATTTTGTTTTCATGATTGACTTAGGGTAGGTTAGGT
TATAGTACTTGTTCTTGTGCAATCTAAAGCATTTTACCATTATTATCATATTTATTTATTTTTTCCAAGATTCTCTTTTTTTCTTAGTTGATTGAAAAGTCATTTTGATT
GAAATATTTGGTCGGAAGCTAACCTAAACGTAGGTCTTTAGACAAATGCGTATGGGCGGATCAAATCCTCCCACTTCACCGGTCTTAATGAC
Protein sequenceShow/hide protein sequence
DLFALFFSDKGSSKWIKVHERRTLHDVLKEPNYIIPGIPVFYVVSRNSKFYKDFKAGRWVPPS