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CSPI03G27180 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G27180
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionS-protein homolog
Genome locationChr3:24689098..24689511
RNA-Seq ExpressionCSPI03G27180
SyntenyCSPI03G27180
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650840.1 hypothetical protein Csa_017632 [Cucumis sativus]4.0e-2647.73Show/hide
Query:  LVLLAWVMHSQSCFAFRLSSWTIRVFNDMNNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDNHVSLELF---NAYEPNLYYR
        LV+ + ++  Q+     L  W ++V N+M  G++L +HCKSKDDD G   L  G+ F+W FRENLW +TL+WCY+ N  NHVSLE+F    A +P L YR
Subjt:  LVLLAWVMHSQSCFAFRLSSWTIRVFNDMNNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDNHVSLELF---NAYEPNLYYR

Query:  CKSFECIWSIREDGIYGLNKDFDNQFELIGKW
        C+   C WS R DGIY  N   +N+FEL  KW
Subjt:  CKSFECIWSIREDGIYGLNKDFDNQFELIGKW

KAE8651384.1 hypothetical protein Csa_001671 [Cucumis sativus]4.5e-2549.58Show/hide
Query:  LSSWTIRVFNDMNNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDNHVSLELFNAYEPN----LYYRCKSFECIWSIREDGIY
        LSSW + + N+M   ++L I CKSKDDDLG   L + +QF+WSF+ENLW +TL+WCY+ N  +H S   FN Y P     L +RC+   CIWS R+DGIY
Subjt:  LSSWTIRVFNDMNNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDNHVSLELFNAYEPN----LYYRCKSFECIWSIREDGIY

Query:  GLNKDFDNQFELIGKWESG
         L  +  N +ELI  WE G
Subjt:  GLNKDFDNQFELIGKWESG

XP_016900393.1 PREDICTED: pumilio homolog 15-like, partial [Cucumis melo]3.9e-5383.76Show/hide
Query:  MAFALVLLAWVMHSQSCFAFRLSSWTIRVFNDMNNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDNHVSLELFNAYEPNLYY
        + F LVLLA  M  Q CFAFR S WT+RVFNDM NGE LSIHCKSKDDDLGL YLD+  QFTWSFRENLWSSTLFWCYIRNQD+HVSLE+FNAYEPNLYY
Subjt:  MAFALVLLAWVMHSQSCFAFRLSSWTIRVFNDMNNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDNHVSLELFNAYEPNLYY

Query:  RCKSFECIWSIREDGIY
        RCKSFECIWSIREDGIY
Subjt:  RCKSFECIWSIREDGIY

XP_022931006.1 S-protein homolog 1-like [Cucurbita moschata]9.9e-4159.09Show/hide
Query:  LVLLAWVMHSQSCFAFRLSSWTIRVFNDMNNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDNHVSLELFNAYEPNLYYRCKS
        L++LA+VM S+SCFA+R  +W IRVFNDM++GETL IHCKSKDDDLG   L +G    W FREN+W +TLFWC I +   H +LE+FN+ +P LY+RC  
Subjt:  LVLLAWVMHSQSCFAFRLSSWTIRVFNDMNNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDNHVSLELFNAYEPNLYYRCKS

Query:  FECIWSIREDGIYGLNKDFDNQFELIGKWESG
        F CIWSIR+DGIY  N   +N +ELI KWE G
Subjt:  FECIWSIREDGIYGLNKDFDNQFELIGKWESG

XP_023532937.1 S-protein homolog 1-like [Cucurbita pepo subsp. pepo]8.4e-4058.33Show/hide
Query:  LVLLAWVMHSQSCFAFRLSSWTIRVFNDMNNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDNHVSLELFNAYEPNLYYRCKS
        L+ LA+VM S+SCFA+R  +W IRVFNDM++GETL IHCKSKDDDLG   L +G    W FREN+W +TLFWC I +   H +LE+FN+ +P LY+RC  
Subjt:  LVLLAWVMHSQSCFAFRLSSWTIRVFNDMNNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDNHVSLELFNAYEPNLYYRCKS

Query:  FECIWSIREDGIYGLNKDFDNQFELIGKWESG
        + CIWSIR+DGIY  N   +N +ELI KWE G
Subjt:  FECIWSIREDGIYGLNKDFDNQFELIGKWESG

TrEMBL top hitse value%identityAlignment
A0A1S4DWP0 S-protein homolog1.9e-5383.76Show/hide
Query:  MAFALVLLAWVMHSQSCFAFRLSSWTIRVFNDMNNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDNHVSLELFNAYEPNLYY
        + F LVLLA  M  Q CFAFR S WT+RVFNDM NGE LSIHCKSKDDDLGL YLD+  QFTWSFRENLWSSTLFWCYIRNQD+HVSLE+FNAYEPNLYY
Subjt:  MAFALVLLAWVMHSQSCFAFRLSSWTIRVFNDMNNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDNHVSLELFNAYEPNLYY

Query:  RCKSFECIWSIREDGIY
        RCKSFECIWSIREDGIY
Subjt:  RCKSFECIWSIREDGIY

A0A2K2BPC1 S-protein homolog1.1e-2442.86Show/hide
Query:  ALVL-LAWVMHSQSCFA--------FRLSSWTIRVFNDMNNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDNHVSLELFNAY
        ALVL LA     Q CF         +  ++W + V N ++N   LS+HCKSKDDDLG HYL  G  FTWSFRE+ +  TLFWC +   D H   ++F  +
Subjt:  ALVL-LAWVMHSQSCFA--------FRLSSWTIRVFNDMNNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDNHVSLELFNAY

Query:  EPNLYYRCKSFECIWSIREDGIYGLNKDFDNQFELIGKWE
        +  L+Y+C    C+W++++DGIY  N D D   EL   WE
Subjt:  EPNLYYRCKSFECIWSIREDGIYGLNKDFDNQFELIGKWE

A0A6J0MEH7 S-protein homolog1.2e-2343.59Show/hide
Query:  RLSSWTIRVFNDMNNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDNHVSLELFNAYEPNLYYRCKSFECIWSIREDGIYGLN
        ++S W I V N +   ETL IHCKSKDDDLG   L +G +F+W+FREN+  +TLFWCY+   D H+++++F   +  L++RC   +C+W+ + DG+Y  N
Subjt:  RLSSWTIRVFNDMNNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDNHVSLELFNAYEPNLYYRCKSFECIWSIREDGIYGLN

Query:  KDFDNQFELIGKWESGW
             ++ L+ KWE+GW
Subjt:  KDFDNQFELIGKWESGW

A0A6J1CQW3 S-protein homolog5.3e-2446.09Show/hide
Query:  SSWTIRVFNDMNNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDN-HVSLELF---NAYEPNLYYRCKSFECIWSIREDGIYG
        + W + + N +++G+TL IHCKSKDDDLG+H L +G +F W+FR+NLW +TLFWCY+R  DN + S E++    + E  LY  C   +CIW+ ++DGIY 
Subjt:  SSWTIRVFNDMNNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDN-HVSLELF---NAYEPNLYYRCKSFECIWSIREDGIYG

Query:  LNKDFDNQFELIGKW
        +     N+ EL  KW
Subjt:  LNKDFDNQFELIGKW

A0A6J1ESI0 S-protein homolog4.8e-4159.09Show/hide
Query:  LVLLAWVMHSQSCFAFRLSSWTIRVFNDMNNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDNHVSLELFNAYEPNLYYRCKS
        L++LA+VM S+SCFA+R  +W IRVFNDM++GETL IHCKSKDDDLG   L +G    W FREN+W +TLFWC I +   H +LE+FN+ +P LY+RC  
Subjt:  LVLLAWVMHSQSCFAFRLSSWTIRVFNDMNNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDNHVSLELFNAYEPNLYYRCKS

Query:  FECIWSIREDGIYGLNKDFDNQFELIGKWESG
        F CIWSIR+DGIY  N   +N +ELI KWE G
Subjt:  FECIWSIREDGIYGLNKDFDNQFELIGKWESG

SwissProt top hitse value%identityAlignment
F4JLS0 S-protein homolog 12.2e-2241.03Show/hide
Query:  RLSSWTIRVFNDMNNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDNHVSLELFNAYEPNLYYRCKSFECIWSIREDGIYGLN
        ++S W + V N +  GETL IHCKSK+DDLG   L    +F+W+F EN+  ST FWCY+   + H+++ +F   +  L++RC    CIW+ + DG+Y L 
Subjt:  RLSSWTIRVFNDMNNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDNHVSLELFNAYEPNLYYRCKSFECIWSIREDGIYGLN

Query:  KDFDNQFELIGKWESGW
             +  L  KWE GW
Subjt:  KDFDNQFELIGKWESGW

P0DN92 S-protein homolog 243.1e-1340.62Show/hide
Query:  RVFNDMNNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDNHVSLELFNAYEPNL-YYRCKSFECIWSIREDGIYGLNKD
        RV    +N   L IHCKS+DDDLG H L  G+ F W F  N   STL++C        +   +F  Y  N  +YRC +  C W   +DGIYG ++D
Subjt:  RVFNDMNNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDNHVSLELFNAYEPNL-YYRCKSFECIWSIREDGIYGLNKD

Q2HQ46 S-protein homolog 749.7e-2341.03Show/hide
Query:  RLSSWTIRVFNDMNNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDNHVSLELFNAYEPNLYYRCKSFECIWSIREDGIYGLN
        ++S W + V N +  GETL IHCKSK++DLG   L    +F+W+F EN+  STLFWCY+   D H+++++F   +  L++RC    C+W+ + DG+Y  N
Subjt:  RLSSWTIRVFNDMNNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDNHVSLELFNAYEPNLYYRCKSFECIWSIREDGIYGLN

Query:  KDFDNQFELIGKWESGW
                L  KW+SGW
Subjt:  KDFDNQFELIGKWESGW

Q9FI84 S-protein homolog 271.5e-1240.7Show/hide
Query:  NNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWC-YIRNQDNHVSLELFNAYEPNLYYRCKSFECIWSIREDGIYG
        NN   L IHCKSKDDDLG H    G+ + W F  N  +STL++C + + QDN    ++  A     +YRC++  C W+ ++D +YG
Subjt:  NNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWC-YIRNQDNHVSLELFNAYEPNLYYRCKSFECIWSIREDGIYG

Q9LW22 S-protein homolog 214.5e-1236.17Show/hide
Query:  TIRVFNDMN--NGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDNHVSLELFNAYEPNLYYRCKSFECIWSIREDGIY
        TI V N++N  N   L +HCKSK++D+G+ YL IG+  ++SF+ N W +T FWC +    ++       AY+    +        W  R+DGIY
Subjt:  TIRVFNDMN--NGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDNHVSLELFNAYEPNLYYRCKSFECIWSIREDGIY

Arabidopsis top hitse value%identityAlignment
AT3G26880.1 Plant self-incompatibility protein S1 family3.2e-1336.17Show/hide
Query:  TIRVFNDMN--NGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDNHVSLELFNAYEPNLYYRCKSFECIWSIREDGIY
        TI V N++N  N   L +HCKSK++D+G+ YL IG+  ++SF+ N W +T FWC +    ++       AY+    +        W  R+DGIY
Subjt:  TIRVFNDMN--NGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDNHVSLELFNAYEPNLYYRCKSFECIWSIREDGIY

AT4G16295.1 S-protein homologue 11.5e-2341.03Show/hide
Query:  RLSSWTIRVFNDMNNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDNHVSLELFNAYEPNLYYRCKSFECIWSIREDGIYGLN
        ++S W + V N +  GETL IHCKSK+DDLG   L    +F+W+F EN+  ST FWCY+   + H+++ +F   +  L++RC    CIW+ + DG+Y L 
Subjt:  RLSSWTIRVFNDMNNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDNHVSLELFNAYEPNLYYRCKSFECIWSIREDGIYGLN

Query:  KDFDNQFELIGKWESGW
             +  L  KWE GW
Subjt:  KDFDNQFELIGKWESGW

AT4G29035.1 Plant self-incompatibility protein S1 family6.9e-2441.03Show/hide
Query:  RLSSWTIRVFNDMNNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDNHVSLELFNAYEPNLYYRCKSFECIWSIREDGIYGLN
        ++S W + V N +  GETL IHCKSK++DLG   L    +F+W+F EN+  STLFWCY+   D H+++++F   +  L++RC    C+W+ + DG+Y  N
Subjt:  RLSSWTIRVFNDMNNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDNHVSLELFNAYEPNLYYRCKSFECIWSIREDGIYGLN

Query:  KDFDNQFELIGKWESGW
                L  KW+SGW
Subjt:  KDFDNQFELIGKWESGW

AT5G04350.1 Plant self-incompatibility protein S1 family2.5e-1339.08Show/hide
Query:  NDMNNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDNHVSLELFNAYEPNLYYRCKSFECIWSIREDGIY
        N + + + L +HC+SKDDDLG H L IG+ + ++F +N+W +T F C +    N      F AYE + + +     C W  REDGIY
Subjt:  NDMNNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDNHVSLELFNAYEPNLYYRCKSFECIWSIREDGIY

AT5G06020.1 Plant self-incompatibility protein S1 family1.1e-1340.7Show/hide
Query:  NNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWC-YIRNQDNHVSLELFNAYEPNLYYRCKSFECIWSIREDGIYG
        NN   L IHCKSKDDDLG H    G+ + W F  N  +STL++C + + QDN    ++  A     +YRC++  C W+ ++D +YG
Subjt:  NNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWC-YIRNQDNHVSLELFNAYEPNLYYRCKSFECIWSIREDGIYG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTTGCTTTGGTATTGTTAGCATGGGTGATGCATAGTCAATCGTGCTTTGCATTTCGTCTTAGTAGTTGGACGATTCGAGTATTTAATGACATGAATAATGGAGA
AACGTTATCGATTCACTGTAAATCTAAAGATGACGATTTGGGACTACATTATCTCGACATCGGAAAGCAGTTTACATGGAGTTTTAGAGAAAATCTATGGTCGTCAACGT
TGTTTTGGTGCTACATTCGAAACCAAGATAATCATGTGTCTTTAGAATTGTTTAATGCTTATGAACCTAACTTATATTATAGATGTAAGAGTTTTGAGTGCATTTGGTCC
ATCAGAGAGGATGGAATTTATGGGTTAAATAAAGATTTTGACAATCAATTTGAATTGATAGGTAAATGGGAGTCTGGTTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTTGCTTTGGTATTGTTAGCATGGGTGATGCATAGTCAATCGTGCTTTGCATTTCGTCTTAGTAGTTGGACGATTCGAGTATTTAATGACATGAATAATGGAGA
AACGTTATCGATTCACTGTAAATCTAAAGATGACGATTTGGGACTACATTATCTCGACATCGGAAAGCAGTTTACATGGAGTTTTAGAGAAAATCTATGGTCGTCAACGT
TGTTTTGGTGCTACATTCGAAACCAAGATAATCATGTGTCTTTAGAATTGTTTAATGCTTATGAACCTAACTTATATTATAGATGTAAGAGTTTTGAGTGCATTTGGTCC
ATCAGAGAGGATGGAATTTATGGGTTAAATAAAGATTTTGACAATCAATTTGAATTGATAGGTAAATGGGAGTCTGGTTGGTAG
Protein sequenceShow/hide protein sequence
MAFALVLLAWVMHSQSCFAFRLSSWTIRVFNDMNNGETLSIHCKSKDDDLGLHYLDIGKQFTWSFRENLWSSTLFWCYIRNQDNHVSLELFNAYEPNLYYRCKSFECIWS
IREDGIYGLNKDFDNQFELIGKWESGW