; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G27220 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G27220
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr3:24732715..24733712
RNA-Seq ExpressionCSPI03G27220
SyntenyCSPI03G27220
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606331.1 hypothetical protein SDJN03_03648, partial [Cucurbita argyrosperma subsp. sororia]3.6e-5181.06Show/hide
Query:  MASSCLFHNFPSISGHPLTRHRNPTISLHSQILPLNSLKLKEQSFLFNPQIEKLRTRGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTDLVPDSVPR
        MASSCLFHN PSIS HPL RHRN TI  HSQ LPLNSLKL++QSFL+N +I KLRTRGS SFP+VYAAQNNFLRVFQTVWK+GKDGIEAGTDLVP SVPR
Subjt:  MASSCLFHNFPSISGHPLTRHRNPTISLHSQILPLNSLKLKEQSFLFNPQIEKLRTRGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTDLVPDSVPR

Query:  PIARISVGIVALTIGLFLFKSVLSTALFVLVL
        P+ARISV I AL+IGLFL KSVLSTA FVL +
Subjt:  PIARISVGIVALTIGLFLFKSVLSTALFVLVL
XP_004152015.1 uncharacterized protein LOC101207451 isoform X1 [Cucumis sativus]9.8e-6598.48Show/hide
Query:  MASSCLFHNFPSISGHPLTRHRNPTISLHSQILPLNSLKLKEQSFLFNPQIEKLRTRGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTDLVPDSVPR
        MASSCLFHNFPSISGHPLTRHRNPTISLHSQILPLNSLKLKEQSFLFNPQIEKLRTRGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTDLVPDSVPR
Subjt:  MASSCLFHNFPSISGHPLTRHRNPTISLHSQILPLNSLKLKEQSFLFNPQIEKLRTRGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTDLVPDSVPR

Query:  PIARISVGIVALTIGLFLFKSVLSTALFVLVL
        PIARISVGIVALTIGLFLFKSVLSTALFVL +
Subjt:  PIARISVGIVALTIGLFLFKSVLSTALFVLVL
XP_008447333.1 PREDICTED: uncharacterized protein LOC103489804 [Cucumis melo]8.3e-5689.39Show/hide
Query:  MASSCLFHNFPSISGHPLTRHRNPTISLHSQILPLNSLKLKEQSFLFNPQIEKLRTRGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTDLVPDSVPR
        MASSCLFHNFPSIS HPLTRHRNPTISLHSQ LPLNSLKLK+QS     QIEKLR RGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTDLVP SVPR
Subjt:  MASSCLFHNFPSISGHPLTRHRNPTISLHSQILPLNSLKLKEQSFLFNPQIEKLRTRGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTDLVPDSVPR

Query:  PIARISVGIVALTIGLFLFKSVLSTALFVLVL
        PIARISVGIVAL IGLFLFKS+LSTALFVL +
Subjt:  PIARISVGIVALTIGLFLFKSVLSTALFVLVL
XP_022931135.1 uncharacterized protein LOC111437405 [Cucurbita moschata]4.7e-5180.3Show/hide
Query:  MASSCLFHNFPSISGHPLTRHRNPTISLHSQILPLNSLKLKEQSFLFNPQIEKLRTRGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTDLVPDSVPR
        MASSCLFHN PSIS HPL RHRNPTI  HSQ LPLNSLKL++Q FL+N +I KLRTRGS SFP+VYAAQNNFLRVFQTVWK+GKDGIEAGT+LVP SVPR
Subjt:  MASSCLFHNFPSISGHPLTRHRNPTISLHSQILPLNSLKLKEQSFLFNPQIEKLRTRGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTDLVPDSVPR

Query:  PIARISVGIVALTIGLFLFKSVLSTALFVLVL
        P+ARISV I AL+IGLFL KSVLSTA FVL +
Subjt:  PIARISVGIVALTIGLFLFKSVLSTALFVLVL
XP_038887965.1 uncharacterized protein LOC120077928 [Benincasa hispida]5.7e-5787.88Show/hide
Query:  MASSCLFHNFPSISGHPLTRHRNPTISLHSQILPLNSLKLKEQSFLFNPQIEKLRTRGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTDLVPDSVPR
        MASSCLFHNFPSIS HPLTRHRN  ISLHSQ LP NSLKLK+QSFL NP+I KLRTRGSPSF LVYAAQNNFLRVFQTVWK+GKDGIEAGTDL+PDSVPR
Subjt:  MASSCLFHNFPSISGHPLTRHRNPTISLHSQILPLNSLKLKEQSFLFNPQIEKLRTRGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTDLVPDSVPR

Query:  PIARISVGIVALTIGLFLFKSVLSTALFVLVL
        PIARISVG+VALTIGLFLFKS+LSTALFVL +
Subjt:  PIARISVGIVALTIGLFLFKSVLSTALFVLVL
TrEMBL top hitse value%identityAlignment
A0A0A0LCA2 Uncharacterized protein4.6e-68100Show/hide
Query:  MASSCLFHNFPSISGHPLTRHRNPTISLHSQILPLNSLKLKEQSFLFNPQIEKLRTRGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTDLVPDSVPR
        MASSCLFHNFPSISGHPLTRHRNPTISLHSQILPLNSLKLKEQSFLFNPQIEKLRTRGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTDLVPDSVPR
Subjt:  MASSCLFHNFPSISGHPLTRHRNPTISLHSQILPLNSLKLKEQSFLFNPQIEKLRTRGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTDLVPDSVPR

Query:  PIARISVGIVALTIGLFLFKSVLSTALFVLVLPTLT
        PIARISVGIVALTIGLFLFKSVLSTALFVLVLPTLT
Subjt:  PIARISVGIVALTIGLFLFKSVLSTALFVLVLPTLT
A0A1S3BHT2 uncharacterized protein LOC1034898044.0e-5689.39Show/hide
Query:  MASSCLFHNFPSISGHPLTRHRNPTISLHSQILPLNSLKLKEQSFLFNPQIEKLRTRGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTDLVPDSVPR
        MASSCLFHNFPSIS HPLTRHRNPTISLHSQ LPLNSLKLK+QS     QIEKLR RGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTDLVP SVPR
Subjt:  MASSCLFHNFPSISGHPLTRHRNPTISLHSQILPLNSLKLKEQSFLFNPQIEKLRTRGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTDLVPDSVPR

Query:  PIARISVGIVALTIGLFLFKSVLSTALFVLVL
        PIARISVGIVAL IGLFLFKS+LSTALFVL +
Subjt:  PIARISVGIVALTIGLFLFKSVLSTALFVLVL
A0A6J1DZ75 uncharacterized protein LOC1110259703.1e-4881.06Show/hide
Query:  MASSCLFHNFPSISGHPLTRHRNPTISLHSQILPLNSLKLKEQSFLFNPQIEKLRTRGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTDLVPDSVPR
        MASS LFHNF SIS HP  RHRNP I  HSQ LP NSLKLK+QS   N QI KL  RGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGT LVPDSVPR
Subjt:  MASSCLFHNFPSISGHPLTRHRNPTISLHSQILPLNSLKLKEQSFLFNPQIEKLRTRGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTDLVPDSVPR

Query:  PIARISVGIVALTIGLFLFKSVLSTALFVLVL
        PIARISV IVA TI LFL KSVLSTALFVL +
Subjt:  PIARISVGIVALTIGLFLFKSVLSTALFVLVL
A0A6J1ESP6 uncharacterized protein LOC1114374052.3e-5180.3Show/hide
Query:  MASSCLFHNFPSISGHPLTRHRNPTISLHSQILPLNSLKLKEQSFLFNPQIEKLRTRGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTDLVPDSVPR
        MASSCLFHN PSIS HPL RHRNPTI  HSQ LPLNSLKL++Q FL+N +I KLRTRGS SFP+VYAAQNNFLRVFQTVWK+GKDGIEAGT+LVP SVPR
Subjt:  MASSCLFHNFPSISGHPLTRHRNPTISLHSQILPLNSLKLKEQSFLFNPQIEKLRTRGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTDLVPDSVPR

Query:  PIARISVGIVALTIGLFLFKSVLSTALFVLVL
        P+ARISV I AL+IGLFL KSVLSTA FVL +
Subjt:  PIARISVGIVALTIGLFLFKSVLSTALFVLVL
A0A6J1K1P0 uncharacterized protein LOC1114916104.3e-5079.55Show/hide
Query:  MASSCLFHNFPSISGHPLTRHRNPTISLHSQILPLNSLKLKEQSFLFNPQIEKLRTRGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTDLVPDSVPR
        MASSCLFHN PSIS HPL RHRN TI  HSQ LPLNSLKL++QSFL+  +I KLR R S SFP+VYAAQNNFLRVFQTVWK+GKDGIEAGTDLVPDSVPR
Subjt:  MASSCLFHNFPSISGHPLTRHRNPTISLHSQILPLNSLKLKEQSFLFNPQIEKLRTRGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTDLVPDSVPR

Query:  PIARISVGIVALTIGLFLFKSVLSTALFVLVL
        P+ARISV I AL+IGLFL KSVLSTA FVL +
Subjt:  PIARISVGIVALTIGLFLFKSVLSTALFVLVL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G13220.1 unknown protein5.4e-2156.73Show/hide
Query:  PLNSLKLKEQSFLFNPQIEKLRTRGSPSFP-------LVYAAQNNFLRVFQTVWKIGKDGIEAGTDLVPDSVPRPIARISVGIVALTIGLFLFKSVLSTA
        P + LKLK  S L       LRTR +P  P       LV +AQ++FL+V +T W IGKDGIEAGT+LVP SVPRP+ARISV I AL + LF+ KS LSTA
Subjt:  PLNSLKLKEQSFLFNPQIEKLRTRGSPSFP-------LVYAAQNNFLRVFQTVWKIGKDGIEAGTDLVPDSVPRPIARISVGIVALTIGLFLFKSVLSTA

Query:  LFVL
         FVL
Subjt:  LFVL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTTCATGTCTATTTCACAACTTCCCTTCAATTTCAGGACACCCGTTAACACGTCATAGAAATCCAACTATATCCCTCCATTCCCAGATCCTCCCTTTGAATTC
CTTAAAACTCAAAGAACAATCTTTCCTCTTTAATCCACAAATTGAAAAGCTAAGAACTCGAGGTTCTCCTTCTTTTCCTCTTGTATATGCCGCTCAGAACAATTTCTTGA
GAGTCTTTCAGACAGTTTGGAAGATTGGGAAGGATGGAATTGAGGCAGGAACAGACCTAGTACCTGACTCTGTACCAAGACCAATTGCAAGGATATCTGTTGGAATAGTT
GCATTAACAATTGGACTCTTTTTATTCAAGTCAGTTTTGTCTACAGCCTTATTTGTGCTGGTATTGCCTACTCTTACCTAG
mRNA sequenceShow/hide mRNA sequence
CTCACCTTCTTCCTCAATTCAATTCCACCATCGTTTCAAAATCATCCATTTTAATGGCTTCTTCATGTCTATTTCACAACTTCCCTTCAATTTCAGGACACCCGTTAACA
CGTCATAGAAATCCAACTATATCCCTCCATTCCCAGATCCTCCCTTTGAATTCCTTAAAACTCAAAGAACAATCTTTCCTCTTTAATCCACAAATTGAAAAGCTAAGAAC
TCGAGGTTCTCCTTCTTTTCCTCTTGTATATGCCGCTCAGAACAATTTCTTGAGAGTCTTTCAGACAGTTTGGAAGATTGGGAAGGATGGAATTGAGGCAGGAACAGACC
TAGTACCTGACTCTGTACCAAGACCAATTGCAAGGATATCTGTTGGAATAGTTGCATTAACAATTGGACTCTTTTTATTCAAGTCAGTTTTGTCTACAGCCTTATTTGTG
CTGGTATTGCCTACTCTTACCTAG
Protein sequenceShow/hide protein sequence
MASSCLFHNFPSISGHPLTRHRNPTISLHSQILPLNSLKLKEQSFLFNPQIEKLRTRGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTDLVPDSVPRPIARISVGIV
ALTIGLFLFKSVLSTALFVLVLPTLT