CuGenDBv2

Gene ID	CSPI03G27240
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Transcription initiation factor IIF subunit alpha
Genome location	Chr3:24791589..24797699
RNA-Seq Expression	CSPI03G27240
Synteny	CSPI03G27240
Gene Ontology terms	GO:0006367 - transcription initiation from RNA polymerase II promoter (biological process) GO:0006413 - translational initiation (biological process) GO:0032968 - positive regulation of transcription elongation from RNA polymerase II promoter (biological process) GO:0005674 - transcription factor TFIIF complex (cellular component) GO:0001096 - TFIIF-class transcription factor complex binding (molecular function) GO:0003677 - DNA binding (molecular function) GO:0003743 - translation initiation factor activity (molecular function) GO:0008168 - methyltransferase activity (molecular function) GO:0016251 - RNA polymerase II general transcription initiation factor activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004152016.1 transcription initiation factor IIF subunit alpha isoform X1 [Cucumis sativus]

1.2e-294

100

Show/hide

Query:  MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
Subjt:  MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
        TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT

Query:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
        PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
Subjt:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA

Query:  RLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        RLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  RLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

XP_016900419.1 PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor IIF subunit alpha [Cucumis melo]

6.6e-290

98.51

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Query:  MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MSFDLLLK SCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASAS+DKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
Subjt:  MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQL+DALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAE KMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
        TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDD+DDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT

Query:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
        PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETE K TDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
Subjt:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA

Query:  RLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        RLRTPEDKNAFAEILRRISRIQK NGGPSYVVLRKPED
Subjt:  RLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

XP_022931161.1 transcription initiation factor IIF subunit alpha-like isoform X1 [Cucurbita moschata]

2.7e-275

94.06

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Query:  MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MS DLLLK SCSGCGSTTELYGSNCKHMTLCL CGKTMAENKGKCYDCGATVTRLIREYNVRAS+S+DKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
Subjt:  MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQL+DALREKYKNRPWLLEDETGQ QFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDK++VG +GRGRRK T DENEGNVSDRGEEDEEEEAARKNRLGL+KKGGGDDDDEEGPRGG+HDLDDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG-EDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKP
        TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG E+DDDDDD +E++GGTPV PSKQKD VKEEAAANSPSKP
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG-EDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKP

Query:  TPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFK
         PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETESK+TDEGV TS+STASKGA ASVKTEP+S SGPVTEEEIRAVLRQRTPVTTQDLVAKFK
Subjt:  TPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFK

Query:  ARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        ARLR+ EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  ARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

XP_031738317.1 transcription initiation factor IIF subunit alpha isoform X2 [Cucumis sativus]

2.5e-281

99.81

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Query:  MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
Subjt:  MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
        TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT

Query:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
        PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
Subjt:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA

Query:  RLRTPEDKNAFAEILRRI
        RLRTPEDKNAFAEILR I
Subjt:  RLRTPEDKNAFAEILRRI

XP_038888042.1 transcription initiation factor IIF subunit alpha isoform X1 [Benincasa hispida]

2.2e-285

97.21

Show/hide

Query:  MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MSFDL+LK SCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASAS+DKNYFIGRFMSGLPNFSKKRNAENKWSLYK+GL
Subjt:  MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQL+DALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDKE VGTSGRGRRK TGDENEGNVSDRGEEDEEEEA RKNRLGL+KKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
        TAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT

Query:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
        PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETESK+TDE V TSKSTASKGAPA VKTEP+SHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
Subjt:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA

Query:  RLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        RLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  RLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LCA6 Transcription initiation factor IIF subunit alpha

5.6e-295

100

Show/hide

Query:  MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
Subjt:  MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
        TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT

Query:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
        PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
Subjt:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA

Query:  RLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        RLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  RLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

A0A1S4DWR2 Transcription initiation factor IIF subunit alpha

3.2e-290

98.51

Show/hide

Query:  MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MSFDLLLK SCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASAS+DKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
Subjt:  MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQL+DALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAE KMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
        TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDD+DDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT

Query:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
        PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETE K TDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
Subjt:  PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKA

Query:  RLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        RLRTPEDKNAFAEILRRISRIQK NGGPSYVVLRKPED
Subjt:  RLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

A0A6J1E3E1 Transcription initiation factor IIF subunit alpha

6.7e-272

92.76

Show/hide

Query:  MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MSFDLLLK SCSGCGS+T+LYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASAS+DKNYFIGRFMSGLPNFS+KRNAENKWSLYKEGL
Subjt:  MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDK+ VG SGRGRRKTTGDENEGN SDRGEEDEEEEAARKNRLGL+KK  GDDDDEEGPRGGDHD+DDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT
        TAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDV+ED GGTPV+ SKQKDTVKEEAAA+SPSKP 
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT

Query:  PSGSAKGTPSTAKTAKGKRK-NGEDVKPSSAPPKKMKTETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFK
        PSGS+KGTPS+ K +KGKRK NG+DVKPS+ PPKK+KTET+SK+TDEGV TSKSTASKGAPASVKTE +  SGPVTEEEIRAVLRQRTPVTTQDLVAKFK
Subjt:  PSGSAKGTPSTAKTAKGKRK-NGEDVKPSSAPPKKMKTETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFK

Query:  ARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        ARLR+ EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  ARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

A0A6J1ESX1 Transcription initiation factor IIF subunit alpha

1.3e-275

94.06

Show/hide

Query:  MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MS DLLLK SCSGCGSTTELYGSNCKHMTLCL CGKTMAENKGKCYDCGATVTRLIREYNVRAS+S+DKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
Subjt:  MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQL+DALREKYKNRPWLLEDETGQ QFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDK++VG +GRGRRK T DENEGNVSDRGEEDEEEEAARKNRLGL+KKGGGDDDDEEGPRGG+HDLDDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG-EDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKP
        TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG E+DDDDDD +E++GGTPV PSKQKD VKEEAAANSPSKP
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG-EDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKP

Query:  TPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFK
         PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETESK+TDEGV TS+STASKGA ASVKTEP+S SGPVTEEEIRAVLRQRTPVTTQDLVAKFK
Subjt:  TPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFK

Query:  ARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        ARLR+ EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  ARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

A0A6J1K1N5 Transcription initiation factor IIF subunit alpha

7.9e-273

92.99

Show/hide

Query:  MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MS DLLLK SCSGCGSTTELYGSNCKHMTLCL+CGKTMAENKGKCYDCGATVTRLIREYNVRAS+S+DKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
Subjt:  MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQL+DALREKYKNRPWLLEDETGQ QFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEK-GDDWEHEEIFTDDDE
        GPAAFGEVEKFDDK+++G +GRGRRK T DENEGNVSDRGEEDEEEEAARKNRLGL+KKGGGDDDDEEGPRGGDHDLDDDDIE  GDDWEHEEIFTDDDE
Subjt:  GPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEK-GDDWEHEEIFTDDDE

Query:  TTAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG---EDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSP
        TTAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRR+GGLNDSDG   EDDDDDDD +E++GGTPV PSKQKD VKEEAAANSP
Subjt:  TTAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG---EDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSP

Query:  SKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVA
        SKP PSGSAKGT STAKTAKGKRKNGEDVKPSSAPPKKMKTETESK+TDEG+ TS+STASKGA ASVKTEP+S SGPVTEEEIRAVLRQRTPVTTQDLVA
Subjt:  SKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVA

Query:  KFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        KFKARLR+ EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  KFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

SwissProt top hits

e value

%identity

Alignment

Q54WV4 General transcription factor IIF subunit 1

4.2e-13

27.32

Show/hide

Query:  KNRPWLLEDETGQFQFQGHLEGSQ-SATYYLLVLQGK-EFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKF
        K  PW LED  G   +QG++EG+Q S+ Y+L + Q      A+P   WYNF    +++ LT EEAE+ MK + +  D +   + K      +  G  E  
Subjt:  KNRPWLLEDETGQFQFQGHLEGSQ-SATYYLLVLQGK-EFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKF

Query:  DDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDL
          K          R    D N    ++  ++ ++  A R+ R     +G G+D D         D DDD    GD        T +DE    + EE ED+
Subjt:  DDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDL

Query:  APEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVDEDTGGTPVLPSKQKD-----TVKEEAAANSPSKPTPSGSAK
                E+K+  + + ++N+ E  L+    + K     TGG +D D ++DD+D D D+ +    V      D     +VK+E      SK +     K
Subjt:  APEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVDEDTGGTPVLPSKQKD-----TVKEEAAANSPSKPTPSGSAK

Query:  GTPSTAKTAKGK-RKNGEDVKPSSAPPKKMKTETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRTP
           S+ K+ + K +KN  D    +   KK+K E  S    +  P S S   +    ++      +  P TEE I+ VL++   V + DL+  FK  L+ P
Subjt:  GTPSTAKTAKGK-RKNGEDVKPSSAPPKKMKTETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRTP

Query:  EDKNAFAEILRRISRIQKTNG
        ++K  F  ++  ++R+ + NG
Subjt:  EDKNAFAEILRRISRIQKTNG

Q9SU25 Transcription initiation factor IIF subunit alpha

4.3e-183

67.82

Show/hide

Query:  MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MS  L L  SC GCGS ++LYGS+C+HMTLCL CG+TMA+NK KC++CG  VTRLIREYNVRA+A  DKNYFIGRF++GLPNF  K+ +ENKWSL K+  
Subjt:  MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQ +DA REK KN+PW+LEDETGQFQ+QGHLEGSQSATYYLLV+Q KEF AIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGY+RWMMKAA+N
Subjt:  QGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKETVGTS---GRGRRKTT-GDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTD
        GPA FGEV+  ++KE+ GTS   GRGR+K++ GDE EGNVSDRG+EDEEEEA+RK+RLGL++K   DDDDEEGPRGGD D+DDDDIEKGDDWEHEEIFTD
Subjt:  GPAAFGEVEKFDDKETVGTS---GRGRRKTT-GDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTD

Query:  DDETTAPDREERED-LAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANS
        DDE    D EERED LAPE+PAPPEIKQDE+DE+ E E EGGLSKSGKELKKLL +  GL++SD +DDDD DD +E   GT V  SKQK+  KEE   N+
Subjt:  DDETTAPDREERED-LAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANS

Query:  PSKPTPSGSAKGTPSTAKTAKGKRK--NGEDVKPSSAPPKKMKTETESKAT---DEGVPTSKST----ASKGAPASVKTEPSS-HSGPVTEEEIRAVLRQ
        P+KP PSG  +GTP  AK +KGKRK  +G+  KPSS+  KK+KTE + K++   +     SKS     A K  PAS     SS  +GPVTE+EIRAVL +
Subjt:  PSKPTPSGSAKGTPSTAKTAKGKRK--NGEDVKPSSAPPKKMKTETESKAT---DEGVPTSKST----ASKGAPASVKTEPSS-HSGPVTEEEIRAVLRQ

Query:  RTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRK
        +  VTTQDLV++FKARL+T EDKNAFA ILR+IS+IQK  G  ++VVLR+
Subjt:  RTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRK

Arabidopsis top hits

e value

%identity

Alignment

AT4G12610.1 transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors

9.9e-119

66.17

Show/hide

Query:  LQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKETVGTS---GRGRRKTT-GDENEGNVSDRGE
        +Q KEF AIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGY+RWMMKAA+NGPA FGEV+  ++KE+ GTS   GRGR+K++ GDE EGNVSDRG+
Subjt:  LQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKETVGTS---GRGRRKTT-GDENEGNVSDRGE

Query:  EDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPEIKQDEEDEDEENEGEGGLSK
        EDEEEEA+RK+RLGL++K   DDDDEEGPRGGD D+DDDDIEKGDDWEHEEIFTDDDE    D EERED LAPE+PAPPEIKQDE+DE+ E E EGGLSK
Subjt:  EDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPEIKQDEEDEDEENEGEGGLSK

Query:  SGKELKKLLRRTGGLNDSDGEDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRK--NGEDVKPSSAPPKKMKTE
        SGKELKKLL +  GL++SD +DDDD DD +E   GT V  SKQK+  KEE   N+P+KP PSG  +GTP  AK +KGKRK  +G+  KPSS+  KK+KTE
Subjt:  SGKELKKLLRRTGGLNDSDGEDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRK--NGEDVKPSSAPPKKMKTE

Query:  TESKAT---DEGVPTSKST----ASKGAPASVKTEPSS-HSGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSY
         + K++   +     SKS     A K  PAS     SS  +GPVTE+EIRAVL ++  VTTQDLV++FKARL+T EDKNAFA ILR+IS+IQK  G  ++
Subjt:  TESKAT---DEGVPTSKST----ASKGAPASVKTEPSS-HSGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSY

Query:  VVLRK
        VVLR+
Subjt:  VVLRK

AT4G12610.2 transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors

9.9e-119

66.17

Show/hide

Query:  LQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKETVGTS---GRGRRKTT-GDENEGNVSDRGE
        +Q KEF AIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGY+RWMMKAA+NGPA FGEV+  ++KE+ GTS   GRGR+K++ GDE EGNVSDRG+
Subjt:  LQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKETVGTS---GRGRRKTT-GDENEGNVSDRGE

Query:  EDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPEIKQDEEDEDEENEGEGGLSK
        EDEEEEA+RK+RLGL++K   DDDDEEGPRGGD D+DDDDIEKGDDWEHEEIFTDDDE    D EERED LAPE+PAPPEIKQDE+DE+ E E EGGLSK
Subjt:  EDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPEIKQDEEDEDEENEGEGGLSK

Query:  SGKELKKLLRRTGGLNDSDGEDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRK--NGEDVKPSSAPPKKMKTE
        SGKELKKLL +  GL++SD +DDDD DD +E   GT V  SKQK+  KEE   N+P+KP PSG  +GTP  AK +KGKRK  +G+  KPSS+  KK+KTE
Subjt:  SGKELKKLLRRTGGLNDSDGEDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRK--NGEDVKPSSAPPKKMKTE

Query:  TESKAT---DEGVPTSKST----ASKGAPASVKTEPSS-HSGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSY
         + K++   +     SKS     A K  PAS     SS  +GPVTE+EIRAVL ++  VTTQDLV++FKARL+T EDKNAFA ILR+IS+IQK  G  ++
Subjt:  TESKAT---DEGVPTSKST----ASKGAPASVKTEPSS-HSGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSY

Query:  VVLRK
        VVLR+
Subjt:  VVLRK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCGTTCGATCTGCTCCTGAAGCAATCGTGCAGTGGATGTGGATCCACGACGGAGTTGTATGGGAGCAATTGCAAGCATATGACATTGTGTTTGACTTGTGGA
AAAACTATGGCGGAGAACAAGGGCAAATGTTATGATTGTGGGGCTACTGTAACTCGCTTAATAAGAGAATACAATGTTCGAGCAAGTGCAAGTAACGACAAGAAC
TACTTCATCGGTAGGTTCATGAGTGGGCTTCCGAACTTTTCGAAGAAGAGAAATGCTGAGAATAAATGGTCTCTTTACAAGGAAGGTCTACAAGGACGCCAACTT
TCGGATGCCCTTCGGGAAAAGTACAAGAATAGACCTTGGCTGTTGGAAGATGAAACAGGCCAATTTCAATTCCAAGGTCATCTTGAGGGTTCACAGTCAGCAACA
TACTACTTGCTTGTATTGCAGGGAAAGGAATTTACTGCCATTCCTGCAGGTTCTTGGTACAACTTCAATAAAGTGGCACAGTATAAGCAACTTACATTGGAGGAG
GCAGAAGAAAAAATGAAGAATCGAAAGAAAACGGCAGATGGATATGAAAGATGGATGATGAAAGCTGCAAGTAATGGTCCTGCTGCATTTGGTGAAGTTGAGAAG
TTTGATGACAAAGAAACTGTTGGTACAAGTGGTAGGGGACGGAGAAAAACTACGGGTGATGAGAATGAAGGCAACGTCTCGGATAGGGGAGAAGAAGACGAAGAA
GAAGAGGCAGCAAGGAAGAACAGATTGGGACTCAGTAAAAAGGGCGGTGGTGATGATGATGATGAGGAAGGTCCTAGGGGTGGTGACCATGATTTGGATGATGAT
GATATTGAGAAAGGGGATGATTGGGAGCATGAAGAGATTTTTACTGATGATGATGAAACTACTGCTCCAGATCGTGAAGAAAGGGAGGATTTAGCCCCTGAAGTT
CCTGCACCTCCAGAAATCAAGCAGGATGAAGAAGATGAGGATGAAGAAAATGAAGGGGAAGGGGGGCTGAGCAAATCTGGGAAAGAGTTGAAGAAATTGCTCAGG
CGTACTGGGGGTCTTAATGATTCAGATGGAGAGGATGATGACGATGATGACGATGTGGACGAGGATACTGGTGGCACTCCCGTCTTACCTTCGAAGCAGAAGGAT
ACAGTTAAAGAAGAAGCTGCAGCCAACAGTCCCTCAAAACCAACACCTTCTGGATCTGCCAAGGGAACCCCTTCTACTGCAAAAACGGCAAAGGGGAAAAGGAAA
AATGGTGAGGATGTGAAACCATCCAGTGCACCTCCAAAGAAAATGAAAACAGAGACGGAATCAAAGGCTACAGATGAAGGTGTGCCAACTTCTAAAAGTACGGCC
TCAAAAGGTGCACCAGCATCAGTCAAAACTGAACCATCATCGCATTCTGGACCTGTTACTGAGGAAGAAATTAGGGCTGTCTTGCGGCAAAGAACACCTGTAACT
ACACAGGATCTTGTTGCAAAATTCAAAGCAAGATTACGAACTCCGGAGGACAAGAATGCTTTTGCAGAAATACTTAGGAGAATTTCAAGGATTCAAAAGACGAAC
GGAGGTCCGAGTTACGTTGTGTTGAGAAAACCTGAAGACTAG

mRNA sequence

Show/hide mRNA sequence

GTTGGTGATATATACAAGTTTTTCTTCTATTATGTCATCCATTCCTCGCTCATTTCAATACTCATTCCATTGATTTGGTTACATTCAAATCCCCAAAGAAGCATC
GTCTCGAAGTTAAAAATCAAATTGACATTTAAATTCAAACCTCGGTTACCAAAAGTTACAAATACGATATAGTGAAAAAGGAGAAAAAATAAAGGAAAAAGCAAA
GCAAGGCAGCCCCAGAGATCGGCCCTTCACGCTCTCTCCCCTTGATCTCAGCTTTTCTCACCTCCACGTCGCCACCACCTTCTCTGCTGCCCTATTGCTCAGCCG
CCTCTGTCGTGCTTCACCCTCGTTAAGCCGGCCGTCGCCAGCAGCAGAGATTTGTGGCTGAATTAAGGGGTGGGAGATGTCGTTCGATCTGCTCCTGAAGCAATC
GTGCAGTGGATGTGGATCCACGACGGAGTTGTATGGGAGCAATTGCAAGCATATGACATTGTGTTTGACTTGTGGAAAAACTATGGCGGAGAACAAGGGCAAATG
TTATGATTGTGGGGCTACTGTAACTCGCTTAATAAGAGAATACAATGTTCGAGCAAGTGCAAGTAACGACAAGAACTACTTCATCGGTAGGTTCATGAGTGGGCT
TCCGAACTTTTCGAAGAAGAGAAATGCTGAGAATAAATGGTCTCTTTACAAGGAAGGTCTACAAGGACGCCAACTTTCGGATGCCCTTCGGGAAAAGTACAAGAA
TAGACCTTGGCTGTTGGAAGATGAAACAGGCCAATTTCAATTCCAAGGTCATCTTGAGGGTTCACAGTCAGCAACATACTACTTGCTTGTATTGCAGGGAAAGGA
ATTTACTGCCATTCCTGCAGGTTCTTGGTACAACTTCAATAAAGTGGCACAGTATAAGCAACTTACATTGGAGGAGGCAGAAGAAAAAATGAAGAATCGAAAGAA
AACGGCAGATGGATATGAAAGATGGATGATGAAAGCTGCAAGTAATGGTCCTGCTGCATTTGGTGAAGTTGAGAAGTTTGATGACAAAGAAACTGTTGGTACAAG
TGGTAGGGGACGGAGAAAAACTACGGGTGATGAGAATGAAGGCAACGTCTCGGATAGGGGAGAAGAAGACGAAGAAGAAGAGGCAGCAAGGAAGAACAGATTGGG
ACTCAGTAAAAAGGGCGGTGGTGATGATGATGATGAGGAAGGTCCTAGGGGTGGTGACCATGATTTGGATGATGATGATATTGAGAAAGGGGATGATTGGGAGCA
TGAAGAGATTTTTACTGATGATGATGAAACTACTGCTCCAGATCGTGAAGAAAGGGAGGATTTAGCCCCTGAAGTTCCTGCACCTCCAGAAATCAAGCAGGATGA
AGAAGATGAGGATGAAGAAAATGAAGGGGAAGGGGGGCTGAGCAAATCTGGGAAAGAGTTGAAGAAATTGCTCAGGCGTACTGGGGGTCTTAATGATTCAGATGG
AGAGGATGATGACGATGATGACGATGTGGACGAGGATACTGGTGGCACTCCCGTCTTACCTTCGAAGCAGAAGGATACAGTTAAAGAAGAAGCTGCAGCCAACAG
TCCCTCAAAACCAACACCTTCTGGATCTGCCAAGGGAACCCCTTCTACTGCAAAAACGGCAAAGGGGAAAAGGAAAAATGGTGAGGATGTGAAACCATCCAGTGC
ACCTCCAAAGAAAATGAAAACAGAGACGGAATCAAAGGCTACAGATGAAGGTGTGCCAACTTCTAAAAGTACGGCCTCAAAAGGTGCACCAGCATCAGTCAAAAC
TGAACCATCATCGCATTCTGGACCTGTTACTGAGGAAGAAATTAGGGCTGTCTTGCGGCAAAGAACACCTGTAACTACACAGGATCTTGTTGCAAAATTCAAAGC
AAGATTACGAACTCCGGAGGACAAGAATGCTTTTGCAGAAATACTTAGGAGAATTTCAAGGATTCAAAAGACGAACGGAGGTCCGAGTTACGTTGTGTTGAGAAA
ACCTGAAGACTAGAAGAATCAAGTTAATGCTTCATCTTTGTGATGTAGCTGGTTCATGATTCCTTACTGGTTGGTGTGTTATGGTCGTTGAGTACAATGTTTACG
TGTCGATACTCTATGCTGCAAAAGCTTGAGAGGGCCTCCTCTTTCACATGTGATGTGATGAACTTGATATGGTACACTTTTATCTAGGCAAATGCAAAGGATAAA
TTTATGGATTTAATAGAGGCATTCACTATTGGAATTTAAGTTTAAGAAGATATAGGTATACGTTGAGAAAGAAACGAAAAATTCTTCAGACATTTTGTCATATTG
GTTGTCATTTTAACTTTGGCATTTTCTCAGAGACGTTTCTAAAATAATGCTCGGAGTAAAATAATATTAAAATAAATAGGGTGTCC

Protein sequence

Show/hide protein sequence

MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGLQGRQL
SDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEK
FDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEV
PAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRK
NGEDVKPSSAPPKKMKTETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTN
GGPSYVVLRKPED

CSPI03G27240 (gene) of Cucumber (PI 183967) v1 genome