CuGenDBv2

Gene ID	CSPI03G27540
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	protein XRI1-like
Genome location	Chr3:25108088..25111671
RNA-Seq Expression	CSPI03G27540
Synteny	CSPI03G27540
Gene Ontology terms	GO:0006281 - DNA repair (biological process) GO:0007140 - male meiotic nuclear division (biological process) GO:0007143 - female meiotic nuclear division (biological process) GO:0009555 - pollen development (biological process) GO:0010165 - response to X-ray (biological process) GO:0005634 - nucleus (cellular component)
InterPro domains	IPR039933 - Protein XRI1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0025348.1 protein XRI1 isoform X1 [Cucumis melo var. makuwa]

6.1e-168

97.31

Show/hide

Query:  NDTWNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSICREDLSSR
        +D WNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETS+CREDLSSR
Subjt:  NDTWNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSICREDLSSR

Query:  FLKSHNKVVSSPAALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQIDVSEFCDGAPEFKSNVVQHHPTRAPP
        FLKSHNK VSS AALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDL FAGTSDIQIDVSEFCDGAPEFKSNVV HHPTRAPP
Subjt:  FLKSHNKVVSSPAALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQIDVSEFCDGAPEFKSNVVQHHPTRAPP

Query:  NIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG
        NIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPS+SYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG
Subjt:  NIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG

XP_004144384.1 protein XRI1 [Cucumis sativus]

7.2e-177

100

Show/hide

Query:  MDDAAKNNDTWNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSIC
        MDDAAKNNDTWNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSIC
Subjt:  MDDAAKNNDTWNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSIC

Query:  REDLSSRFLKSHNKVVSSPAALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQIDVSEFCDGAPEFKSNVVQH
        REDLSSRFLKSHNKVVSSPAALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQIDVSEFCDGAPEFKSNVVQH
Subjt:  REDLSSRFLKSHNKVVSSPAALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQIDVSEFCDGAPEFKSNVVQH

Query:  HPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGGKGSITIM
        HPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGGKGSITIM
Subjt:  HPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGGKGSITIM

Query:  RTRG
        RTRG
Subjt:  RTRG

XP_008461885.1 PREDICTED: protein XRI1 isoform X1 [Cucumis melo]

7.7e-171

97.05

Show/hide

Query:  MDDAAKNN-DTWNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSI
        MDD AKNN D WNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETS+
Subjt:  MDDAAKNN-DTWNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSI

Query:  CREDLSSRFLKSHNKVVSSPAALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQIDVSEFCDGAPEFKSNVVQ
        CREDLSSRFLKSHNK VSS AALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDL FAGTSDIQIDVSEFCDGAPEFKSNVV 
Subjt:  CREDLSSRFLKSHNKVVSSPAALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQIDVSEFCDGAPEFKSNVVQ

Query:  HHPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGGKGSITI
        HHPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPS+SYPTSAFSGKPVVGKTKIHTEGGKGSITI
Subjt:  HHPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGGKGSITI

Query:  MRTRG
        MRTRG
Subjt:  MRTRG

XP_008461886.1 PREDICTED: protein XRI1 isoform X2 [Cucumis melo]

3.1e-172

97.37

Show/hide

Query:  MDDAAKNNDTWNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSIC
        MDD AKNND WNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETS+C
Subjt:  MDDAAKNNDTWNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSIC

Query:  REDLSSRFLKSHNKVVSSPAALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQIDVSEFCDGAPEFKSNVVQH
        REDLSSRFLKSHNK VSS AALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDL FAGTSDIQIDVSEFCDGAPEFKSNVV H
Subjt:  REDLSSRFLKSHNKVVSSPAALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQIDVSEFCDGAPEFKSNVVQH

Query:  HPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGGKGSITIM
        HPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPS+SYPTSAFSGKPVVGKTKIHTEGGKGSITIM
Subjt:  HPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGGKGSITIM

Query:  RTRG
        RTRG
Subjt:  RTRG

XP_038887270.1 protein XRI1 [Benincasa hispida]

1.2e-166

93.75

Show/hide

Query:  MDDAAKNNDTWNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSIC
        MDD + N D+WNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAYHVTC DDRN+KSEESRET SQAKRRRMLQFTAQDLE S C
Subjt:  MDDAAKNNDTWNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSIC

Query:  REDLSSRFLKSHNKVVSSPAALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQIDVSEFCDGAPEFKSNVVQH
        REDLSSRFLKSH+K VSSPAALAEVSYGIPECS L+DNVLISCHENLDHSP+GWIAECLNDADMHCSPEDL+F GTSDIQIDVSEFCDGAPEFKSN VQH
Subjt:  REDLSSRFLKSHNKVVSSPAALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQIDVSEFCDGAPEFKSNVVQH

Query:  HPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGGKGSITIM
        HPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPS+SYPTSAFSGKPVVGKTKIHTEGGKGSITIM
Subjt:  HPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGGKGSITIM

Query:  RTRG
        RTRG
Subjt:  RTRG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LBN6 Uncharacterized protein

3.5e-177

100

Show/hide

Query:  MDDAAKNNDTWNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSIC
        MDDAAKNNDTWNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSIC
Subjt:  MDDAAKNNDTWNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSIC

Query:  REDLSSRFLKSHNKVVSSPAALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQIDVSEFCDGAPEFKSNVVQH
        REDLSSRFLKSHNKVVSSPAALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQIDVSEFCDGAPEFKSNVVQH
Subjt:  REDLSSRFLKSHNKVVSSPAALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQIDVSEFCDGAPEFKSNVVQH

Query:  HPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGGKGSITIM
        HPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGGKGSITIM
Subjt:  HPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGGKGSITIM

Query:  RTRG
        RTRG
Subjt:  RTRG

A0A1S3CFL6 protein XRI1 isoform X2

1.5e-172

97.37

Show/hide

Query:  MDDAAKNNDTWNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSIC
        MDD AKNND WNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETS+C
Subjt:  MDDAAKNNDTWNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSIC

Query:  REDLSSRFLKSHNKVVSSPAALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQIDVSEFCDGAPEFKSNVVQH
        REDLSSRFLKSHNK VSS AALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDL FAGTSDIQIDVSEFCDGAPEFKSNVV H
Subjt:  REDLSSRFLKSHNKVVSSPAALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQIDVSEFCDGAPEFKSNVVQH

Query:  HPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGGKGSITIM
        HPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPS+SYPTSAFSGKPVVGKTKIHTEGGKGSITIM
Subjt:  HPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGGKGSITIM

Query:  RTRG
        RTRG
Subjt:  RTRG

A0A1S3CH27 protein XRI1 isoform X1

3.7e-171

97.05

Show/hide

Query:  MDDAAKNN-DTWNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSI
        MDD AKNN D WNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETS+
Subjt:  MDDAAKNN-DTWNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSI

Query:  CREDLSSRFLKSHNKVVSSPAALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQIDVSEFCDGAPEFKSNVVQ
        CREDLSSRFLKSHNK VSS AALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDL FAGTSDIQIDVSEFCDGAPEFKSNVV 
Subjt:  CREDLSSRFLKSHNKVVSSPAALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQIDVSEFCDGAPEFKSNVVQ

Query:  HHPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGGKGSITI
        HHPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPS+SYPTSAFSGKPVVGKTKIHTEGGKGSITI
Subjt:  HHPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGGKGSITI

Query:  MRTRG
        MRTRG
Subjt:  MRTRG

A0A5A7SGS7 Protein XRI1 isoform X1

3.0e-168

97.31

Show/hide

Query:  NDTWNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSICREDLSSR
        +D WNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETS+CREDLSSR
Subjt:  NDTWNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSICREDLSSR

Query:  FLKSHNKVVSSPAALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQIDVSEFCDGAPEFKSNVVQHHPTRAPP
        FLKSHNK VSS AALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDL FAGTSDIQIDVSEFCDGAPEFKSNVV HHPTRAPP
Subjt:  FLKSHNKVVSSPAALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQIDVSEFCDGAPEFKSNVVQHHPTRAPP

Query:  NIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG
        NIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPS+SYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG
Subjt:  NIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG

A0A6J1EY26 protein XRI1-like

9.9e-156

89.14

Show/hide

Query:  MDDAAKNNDTWNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSIC
        MDD+AKNND+WNW+GDGYTIQKDTD+   ECLWDGVSEN DLSYVFDETTPVKACGDLAYHVT +DDRNKKSEESRETHSQAKRRRMLQFTAQD+ETS+C
Subjt:  MDDAAKNNDTWNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSIC

Query:  REDLSSRFLKSHNKVVSSPAALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQIDVSEFCDGAPEFKSNVVQH
         EDLSSRFLKSHNK VSSPAA+ +V Y IPECSGL+ NV  SC ENLDHSPEGWIA+CLNDADMHCSPEDL+FAGTSD QIDVSEFC+ APEFKSN VQH
Subjt:  REDLSSRFLKSHNKVVSSPAALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQIDVSEFCDGAPEFKSNVVQH

Query:  HPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGGKGSITIM
        HPTR P NIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPS+SYPTSAFSGKPVVGKTKIHTEGGKGSITIM
Subjt:  HPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGGKGSITIM

Query:  RTRG
        RTRG
Subjt:  RTRG

SwissProt top hits

e value

%identity

Alignment

Q6NLW5 Protein XRI1

2.2e-67

Show/hide

Query:  NDTWNWEGDGYTIQKDTDI-EISECLWDGVSEN-GDLSYVF-DETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSICREDL
        + +WNW+ D Y  Q  +   ++ +C    V+ N  D SY+F DE TPVKAC +L YHVT ++D N+K E   ET S  KRRRMLQF  Q  ETS+   + 
Subjt:  NDTWNWEGDGYTIQKDTDI-EISECLWDGVSEN-GDLSYVF-DETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSICREDL

Query:  SSRFLKSHNKVVSSPAALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQIDVSEFCDGAPEFKSNVVQHHPTR
         S  LKS  +  +    L E S  I    G +++   S  E LD   E W A+CLNDA+    P+DL+F G+ D+Q+D+SE+ +  PE ++  VQ   TR
Subjt:  SSRFLKSHNKVVSSPAALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQIDVSEFCDGAPEFKSNVVQHHPTR

Query:  APPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG
        + PN+IFKGRKS+ R  +KL SS+ YPFAFIKPCG HG +TLKDINQ+IR  PP+K K   E+P+    TSAFSGKPVVGKTKI TEGGKGSITIMRTRG
Subjt:  APPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG

Arabidopsis top hits

e value

%identity

Alignment

AT5G48720.1 x-ray induced transcript 1

8.0e-65

54.34

Show/hide

Query:  DLSYVF-DETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSICREDLSSRFLKSHNKVVSSPAALAEVSYGIPECSGLADNV
        D SY+F DE TPVKAC +L YHVT ++D N+K E   ET S  KRRRMLQF  Q  ETS+   +  S  LKS  +  +    L E S  I    G +++ 
Subjt:  DLSYVF-DETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSICREDLSSRFLKSHNKVVSSPAALAEVSYGIPECSGLADNV

Query:  LISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQIDVSEFCDGAPEFKSNVVQHHPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCG
          S  E LD   E W A+CLNDA+    P+DL+F G+ D+Q+D+SE+ +  PE ++  VQ   TR+ PN+IFKGRKS+ R  +KL SS+ YPFAFIKPCG
Subjt:  LISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQIDVSEFCDGAPEFKSNVVQHHPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCG

Query:  FHGDVTLKDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG
         HG +TLKDINQ+IR  PP+K K   E+P+    TSAFSGKPVVGKTKI TEGGKGSITIMRTRG
Subjt:  FHGDVTLKDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG

AT5G48720.2 x-ray induced transcript 1

1.6e-68

Show/hide

Query:  NDTWNWEGDGYTIQKDTDI-EISECLWDGVSEN-GDLSYVF-DETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSICREDL
        + +WNW+ D Y  Q  +   ++ +C    V+ N  D SY+F DE TPVKAC +L YHVT ++D N+K E   ET S  KRRRMLQF  Q  ETS+   + 
Subjt:  NDTWNWEGDGYTIQKDTDI-EISECLWDGVSEN-GDLSYVF-DETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSICREDL

Query:  SSRFLKSHNKVVSSPAALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQIDVSEFCDGAPEFKSNVVQHHPTR
         S  LKS  +  +    L E S  I    G +++   S  E LD   E W A+CLNDA+    P+DL+F G+ D+Q+D+SE+ +  PE ++  VQ   TR
Subjt:  SSRFLKSHNKVVSSPAALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQIDVSEFCDGAPEFKSNVVQHHPTR

Query:  APPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG
        + PN+IFKGRKS+ R  +KL SS+ YPFAFIKPCG HG +TLKDINQ+IR  PP+K K   E+P+    TSAFSGKPVVGKTKI TEGGKGSITIMRTRG
Subjt:  APPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGATGATGCCGCCAAAAACAATGATACTTGGAATTGGGAAGGTGATGGGTATACTATTCAGAAGGATACTGATATAGAAATATCAGAATGCCTGTGGGACGGGGTCTC
GGAAAATGGTGACCTTTCGTATGTGTTTGATGAAACAACTCCTGTTAAAGCTTGTGGGGACTTGGCATATCATGTTACGTGTAGTGATGATAGGAACAAGAAATCAGAAG
AATCGAGGGAAACTCATTCACAAGCAAAGAGACGGCGGATGTTGCAGTTTACTGCTCAAGATTTGGAAACATCCATCTGCCGTGAAGATTTGTCTTCTAGATTTCTAAAA
TCACATAATAAGGTTGTTTCCAGTCCAGCAGCTCTTGCTGAAGTTTCATATGGGATTCCTGAGTGTTCTGGACTGGCAGATAATGTGCTCATTTCTTGTCACGAGAATTT
GGATCACTCACCTGAAGGTTGGATTGCTGAATGCCTTAATGATGCCGATATGCATTGTAGTCCTGAGGATTTGAGCTTTGCTGGGACTTCGGACATTCAAATTGATGTAT
CAGAGTTTTGTGATGGTGCACCTGAGTTCAAATCTAATGTGGTTCAACATCATCCTACTCGAGCTCCTCCAAACATAATTTTTAAAGGTCGGAAGTCATATATTAGAACT
CCCACTAAATTGGCTTCTTCAGTTGCCTATCCATTTGCCTTTATCAAGCCCTGTGGATTCCATGGAGATGTGACATTGAAGGACATAAACCAACGCATCCGTACACCTCC
ACCATCAAAATTGAAGCATCAACCCGAAGATCCATCTGAATCTTACCCAACTTCAGCTTTCTCTGGAAAGCCTGTAGTAGGTAAAACCAAGATTCACACTGAAGGCGGAA
AGGGAAGCATCACAATCATGAGGACCAGAGGTTAA

mRNA sequence

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AAGAAGGCGAAGAAGAAAAAGAAAAAGAGGAGTACTAAGGCGCTGGTTTGCGAGTTACTCGGCTAGTGGGCACTTTTTCTCCTTCTTCTCCGCCCATAATCCCCCATTAT
CTACCAAAACACCAACACAAACATCCACCACCAGCCTCCCAACCTCTTTCTCTCTTCTTCAAACCCCTCTTTTTCGATCGCACCCAACACCAATTCATCAACCTCTCTTT
TCTTTCACTTTTTCAATCATGGATGATGCCGCCAAAAACAATGATACTTGGAATTGGGAAGGTGATGGGTATACTATTCAGAAGGATACTGATATAGAAATATCAGAATG
CCTGTGGGACGGGGTCTCGGAAAATGGTGACCTTTCGTATGTGTTTGATGAAACAACTCCTGTTAAAGCTTGTGGGGACTTGGCATATCATGTTACGTGTAGTGATGATA
GGAACAAGAAATCAGAAGAATCGAGGGAAACTCATTCACAAGCAAAGAGACGGCGGATGTTGCAGTTTACTGCTCAAGATTTGGAAACATCCATCTGCCGTGAAGATTTG
TCTTCTAGATTTCTAAAATCACATAATAAGGTTGTTTCCAGTCCAGCAGCTCTTGCTGAAGTTTCATATGGGATTCCTGAGTGTTCTGGACTGGCAGATAATGTGCTCAT
TTCTTGTCACGAGAATTTGGATCACTCACCTGAAGGTTGGATTGCTGAATGCCTTAATGATGCCGATATGCATTGTAGTCCTGAGGATTTGAGCTTTGCTGGGACTTCGG
ACATTCAAATTGATGTATCAGAGTTTTGTGATGGTGCACCTGAGTTCAAATCTAATGTGGTTCAACATCATCCTACTCGAGCTCCTCCAAACATAATTTTTAAAGGTCGG
AAGTCATATATTAGAACTCCCACTAAATTGGCTTCTTCAGTTGCCTATCCATTTGCCTTTATCAAGCCCTGTGGATTCCATGGAGATGTGACATTGAAGGACATAAACCA
ACGCATCCGTACACCTCCACCATCAAAATTGAAGCATCAACCCGAAGATCCATCTGAATCTTACCCAACTTCAGCTTTCTCTGGAAAGCCTGTAGTAGGTAAAACCAAGA
TTCACACTGAAGGCGGAAAGGGAAGCATCACAATCATGAGGACCAGAGGTTAAACGAACGATGGATAATGGTTCCCGCTATCCAGACTTTCCTTTTTGTGGCCCGTTGGT
CCTTCCATCCTTGAGGGATTGTAAAATGTCAGGGGCCATCTTAAGTAAGTAGAGTACAGAAGGTGATTAATTTCCATTTTTGGTGGGGATAGATAGAGAGAAAGAGAGTT
GTGCAGAAGTATTAGAGTTGCTCTTGGAAACCCTAATCATATATAACTTCATTAATATGTTTATGCTTCCAAGTGAACTCTTGTAGGTTGTTGGAGTTCGAGTTCGACAC
CGATAACATTTATATGGTCATTTTTAGACTTGAAAACACTTATCATTATGTTTATTATCAAATCATTCCATTGCTTATACCTTATGAAACTTGCTGGAAAGCTTAA

Protein sequence

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MDDAAKNNDTWNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSICREDLSSRFLK
SHNKVVSSPAALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQIDVSEFCDGAPEFKSNVVQHHPTRAPPNIIFKGRKSYIRT
PTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG

CSPI03G27540 (gene) of Cucumber (PI 183967) v1 genome