; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G27560 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G27560
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 3-like
Genome locationChr3:25115617..25116192
RNA-Seq ExpressionCSPI03G27560
SyntenyCSPI03G27560
Gene Ontology termsGO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR008906 - HAT, C-terminal dimerisation domain
IPR012337 - Ribonuclease H-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK14363.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]3.8e-2239.67Show/hide
Query:  DTGKEVGNKVESVLRRLFSEYSLKYHSHESSSSSIASSQLQVFKDCTCMSQPLVCSSSRATSSTTSRTSSSASDAFRIHFEDINEEDVLNVDTEVDIYLL
        +  + +GN VE   RRLF EYS          SS +++  Q               ++    S  +       D     FED +        +E+DIYLL
Subjt:  DTGKEVGNKVESVLRRLFSEYSLKYHSHESSSSSIASSQLQVFKDCTCMSQPLVCSSSRATSSTTSRTSSSASDAFRIHFEDINEEDVLNVDTEVDIYLL

Query:  EHHIAREENFDILEWQKENSSRYKVLSQMTRDILAILVSTVDSKSAFSTSGRVIDLFRSTLVPTTVEAFVCVQNWLRSKTVNIE
        E ++  E +FDIL+W K NS R++VL  M RDILAILVSTV S+SAFST GRV+D  R +L P TVEA +C QNWL S  ++++
Subjt:  EHHIAREENFDILEWQKENSSRYKVLSQMTRDILAILVSTVDSKSAFSTSGRVIDLFRSTLVPTTVEAFVCVQNWLRSKTVNIE

TYK23433.1 putative transposase [Cucumis melo var. makuwa]6.4e-2239.67Show/hide
Query:  DTGKEVGNKVESVLRRLFSEYSLKYHSHESSSSSIASSQLQVFKDCTCMSQPLVCSSSRATSSTTSRTSSSASDAFRIHFEDINEEDVLNVDTEVDIYLL
        +  + +GN VE   RRLF EYS          SS +++  Q               ++    S  +       D     FED +        +E+DIYLL
Subjt:  DTGKEVGNKVESVLRRLFSEYSLKYHSHESSSSSIASSQLQVFKDCTCMSQPLVCSSSRATSSTTSRTSSSASDAFRIHFEDINEEDVLNVDTEVDIYLL

Query:  EHHIAREENFDILEWQKENSSRYKVLSQMTRDILAILVSTVDSKSAFSTSGRVIDLFRSTLVPTTVEAFVCVQNWLRSKTVNIE
        E ++  E +FDIL+W K NS R++VL QM RDILAI VSTV S+SAFST GRV+D  R +L P TVEA +C QNWL S  ++++
Subjt:  EHHIAREENFDILEWQKENSSRYKVLSQMTRDILAILVSTVDSKSAFSTSGRVIDLFRSTLVPTTVEAFVCVQNWLRSKTVNIE

XP_038877573.1 zinc finger BED domain-containing protein RICESLEEPER 1-like [Benincasa hispida]7.6e-3145.65Show/hide
Query:  MDTGKEVGNKVESVLRRLFSEYSLKYHSHESSSSSIASSQLQVFKDCTCMSQPLVCSSSRATSSTTSRTSSSASDAFRIHFEDINEEDVLNVDTEVDIYL
        +D  K +G+KVE VLR LF+EY+L         SS           CT  S P               TS+S    F   F+D++E+D  +VD+EVDIYL
Subjt:  MDTGKEVGNKVESVLRRLFSEYSLKYHSHESSSSSIASSQLQVFKDCTCMSQPLVCSSSRATSSTTSRTSSSASDAFRIHFEDINEEDVLNVDTEVDIYL

Query:  LEHHIAREENFDILEWQKENSSRYKVLSQMTRDILAILVSTVDSKSAFSTSGRVIDLFRSTLVPTTVEAFVCVQNWLRSKTVNI
        LE  + RE+NFD+L+W K NSSRYK+L ++ RD+LA+ +STV  +SAF+T G+VID FR++L PT VEA VC QN LRS+ ++I
Subjt:  LEHHIAREENFDILEWQKENSSRYKVLSQMTRDILAILVSTVDSKSAFSTSGRVIDLFRSTLVPTTVEAFVCVQNWLRSKTVNI

XP_038890289.1 zinc finger BED domain-containing protein RICESLEEPER 1-like [Benincasa hispida]9.6e-2641.85Show/hide
Query:  MDTGKEVGNKVESVLRRLFSEYSLKYHSHESSSSSIASSQLQVFKDCTCMSQPLVCSSSRATSSTTSRTSSSASDAFRIHFEDINEEDVLNVDTEVDIYL
        +D  K VG+KV  VLR LF+EY+L        S S+A+                                           +D++E+D  +VD+EVDIYL
Subjt:  MDTGKEVGNKVESVLRRLFSEYSLKYHSHESSSSSIASSQLQVFKDCTCMSQPLVCSSSRATSSTTSRTSSSASDAFRIHFEDINEEDVLNVDTEVDIYL

Query:  LEHHIAREENFDILEWQKENSSRYKVLSQMTRDILAILVSTVDSKSAFSTSGRVIDLFRSTLVPTTVEAFVCVQNWLRSKTVNI
        LE  + RE+NFDIL+W K NSSRYK+ S++ RD+LA+ VS V S+S F+T  RVID FR++L PTT+E+ VC QNWLRS+ ++I
Subjt:  LEHHIAREENFDILEWQKENSSRYKVLSQMTRDILAILVSTVDSKSAFSTSGRVIDLFRSTLVPTTVEAFVCVQNWLRSKTVNI

XP_038895827.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Benincasa hispida]9.6e-2648.5Show/hide
Query:  KEVGNKVESVLRRLFSEYSLKYHSHESSSSSIASSQLQVFKDCTCMSQPLVCSSSRATSSTTSRTSSSASDAFRIHFEDINEEDVLNVDTEVDIYLLEHH
        K + +K+E VLR LF+EY+L        S S+A+                  SS    SS     S+SAS+ FR  FED++E+D  +VD+EV IYLLE  
Subjt:  KEVGNKVESVLRRLFSEYSLKYHSHESSSSSIASSQLQVFKDCTCMSQPLVCSSSRATSSTTSRTSSSASDAFRIHFEDINEEDVLNVDTEVDIYLLEHH

Query:  IAREENFDILEWQKENSSRYKVLSQMTRDILAILVSTVDSKSAFSTSGRVIDLFRSTLVPTTVEAFV
        + RE++FDIL+W K NSSRYK+LS++ RD+LA+ VSTV S+SAFSTSG+VID FR++L PTTVE ++
Subjt:  IAREENFDILEWQKENSSRYKVLSQMTRDILAILVSTVDSKSAFSTSGRVIDLFRSTLVPTTVEAFV

TrEMBL top hitse value%identityAlignment
A0A5D3BX83 Zinc finger BED domain-containing protein RICESLEEPER 3-like4.1e-2239.67Show/hide
Query:  DTGKEVGNKVESVLRRLFSEYSLKYHSHESSSSSIASSQLQVFKDCTCMSQPLVCSSSRATSSTTSRTSSSASDAFRIHFEDINEEDVLNVDTEVDIYLL
        +  + +GN VE   RRLF EYS          SS +++  Q               ++    S  +       D     FED +        +E+DIYLL
Subjt:  DTGKEVGNKVESVLRRLFSEYSLKYHSHESSSSSIASSQLQVFKDCTCMSQPLVCSSSRATSSTTSRTSSSASDAFRIHFEDINEEDVLNVDTEVDIYLL

Query:  EHHIAREENFDILEWQKENSSRYKVLSQMTRDILAILVSTVDSKSAFSTSGRVIDLFRSTLVPTTVEAFVCVQNWLRSKTVNIE
        E ++  E +FDIL+W K NS R++VL QM RDILAI VSTV S+SAFST GRV+D  R +L P TVEA +C QNWL S  ++++
Subjt:  EHHIAREENFDILEWQKENSSRYKVLSQMTRDILAILVSTVDSKSAFSTSGRVIDLFRSTLVPTTVEAFVCVQNWLRSKTVNIE

A0A5D3CR68 Zinc finger BED domain-containing protein RICESLEEPER 3-like1.8e-2239.67Show/hide
Query:  DTGKEVGNKVESVLRRLFSEYSLKYHSHESSSSSIASSQLQVFKDCTCMSQPLVCSSSRATSSTTSRTSSSASDAFRIHFEDINEEDVLNVDTEVDIYLL
        +  + +GN VE   RRLF EYS          SS +++  Q               ++    S  +       D     FED +        +E+DIYLL
Subjt:  DTGKEVGNKVESVLRRLFSEYSLKYHSHESSSSSIASSQLQVFKDCTCMSQPLVCSSSRATSSTTSRTSSSASDAFRIHFEDINEEDVLNVDTEVDIYLL

Query:  EHHIAREENFDILEWQKENSSRYKVLSQMTRDILAILVSTVDSKSAFSTSGRVIDLFRSTLVPTTVEAFVCVQNWLRSKTVNIE
        E ++  E +FDIL+W K NS R++VL  M RDILAILVSTV S+SAFST GRV+D  R +L P TVEA +C QNWL S  ++++
Subjt:  EHHIAREENFDILEWQKENSSRYKVLSQMTRDILAILVSTVDSKSAFSTSGRVIDLFRSTLVPTTVEAFVCVQNWLRSKTVNIE

A0A5D3CXI1 Zinc finger BED domain-containing protein RICESLEEPER 3-like3.1e-2239.67Show/hide
Query:  DTGKEVGNKVESVLRRLFSEYSLKYHSHESSSSSIASSQLQVFKDCTCMSQPLVCSSSRATSSTTSRTSSSASDAFRIHFEDINEEDVLNVDTEVDIYLL
        +  + +GN VE   RRLF EYS          SS +++  Q               ++    S  +       D     FED +        +E+DIYLL
Subjt:  DTGKEVGNKVESVLRRLFSEYSLKYHSHESSSSSIASSQLQVFKDCTCMSQPLVCSSSRATSSTTSRTSSSASDAFRIHFEDINEEDVLNVDTEVDIYLL

Query:  EHHIAREENFDILEWQKENSSRYKVLSQMTRDILAILVSTVDSKSAFSTSGRVIDLFRSTLVPTTVEAFVCVQNWLRSKTVNIE
        E ++  E +FDIL+W K NS R++VL QM RDILAI VSTV S+SAFST GRV+D  R +L P TVEA +C QNWL S  ++++
Subjt:  EHHIAREENFDILEWQKENSSRYKVLSQMTRDILAILVSTVDSKSAFSTSGRVIDLFRSTLVPTTVEAFVCVQNWLRSKTVNIE

A0A5D3DAN8 Zinc finger BED domain-containing protein RICESLEEPER 3-like3.1e-2239.67Show/hide
Query:  DTGKEVGNKVESVLRRLFSEYSLKYHSHESSSSSIASSQLQVFKDCTCMSQPLVCSSSRATSSTTSRTSSSASDAFRIHFEDINEEDVLNVDTEVDIYLL
        +  + +GN VE   RRLF EYS          SS +++  Q               ++    S  +       D     FED +        +E+DIYLL
Subjt:  DTGKEVGNKVESVLRRLFSEYSLKYHSHESSSSSIASSQLQVFKDCTCMSQPLVCSSSRATSSTTSRTSSSASDAFRIHFEDINEEDVLNVDTEVDIYLL

Query:  EHHIAREENFDILEWQKENSSRYKVLSQMTRDILAILVSTVDSKSAFSTSGRVIDLFRSTLVPTTVEAFVCVQNWLRSKTVNIE
        E ++  E +FDIL+W K NS R++VL QM RDILAI VSTV S+SAFST GRV+D  R +L P TVEA +C QNWL S  ++++
Subjt:  EHHIAREENFDILEWQKENSSRYKVLSQMTRDILAILVSTVDSKSAFSTSGRVIDLFRSTLVPTTVEAFVCVQNWLRSKTVNIE

A0A5D3DIL8 Putative transposase3.1e-2239.67Show/hide
Query:  DTGKEVGNKVESVLRRLFSEYSLKYHSHESSSSSIASSQLQVFKDCTCMSQPLVCSSSRATSSTTSRTSSSASDAFRIHFEDINEEDVLNVDTEVDIYLL
        +  + +GN VE   RRLF EYS          SS +++  Q               ++    S  +       D     FED +        +E+DIYLL
Subjt:  DTGKEVGNKVESVLRRLFSEYSLKYHSHESSSSSIASSQLQVFKDCTCMSQPLVCSSSRATSSTTSRTSSSASDAFRIHFEDINEEDVLNVDTEVDIYLL

Query:  EHHIAREENFDILEWQKENSSRYKVLSQMTRDILAILVSTVDSKSAFSTSGRVIDLFRSTLVPTTVEAFVCVQNWLRSKTVNIE
        E ++  E +FDIL+W K NS R++VL QM RDILAI VSTV S+SAFST GRV+D  R +L P TVEA +C QNWL S  ++++
Subjt:  EHHIAREENFDILEWQKENSSRYKVLSQMTRDILAILVSTVDSKSAFSTSGRVIDLFRSTLVPTTVEAFVCVQNWLRSKTVNIE

SwissProt top hitse value%identityAlignment
P03010 Putative AC9 transposase4.3e-1335.94Show/hide
Query:  CSSSRATSSTTSRTS------SSASDAFRIHFEDINEEDVLNVDTEVDIYLLEHHIAREENFDILEWQKENSSRYKVLSQMTRDILAILVSTVDSKSAFS
        CS S   + TT+  S       +  D F+ +  ++ + D +    E+D Y+ E  +     FDIL W +   + Y +L+Q+ RD+LAI VSTV S+SAFS
Subjt:  CSSSRATSSTTSRTS------SSASDAFRIHFEDINEEDVLNVDTEVDIYLLEHHIAREENFDILEWQKENSSRYKVLSQMTRDILAILVSTVDSKSAFS

Query:  TSGRVIDLFRSTLVPTTVEAFVCVQNWL
          GRV+D +R+ L    VEA +C ++W+
Subjt:  TSGRVIDLFRSTLVPTTVEAFVCVQNWL

P08770 Putative AC transposase4.3e-1335.94Show/hide
Query:  CSSSRATSSTTSRTS------SSASDAFRIHFEDINEEDVLNVDTEVDIYLLEHHIAREENFDILEWQKENSSRYKVLSQMTRDILAILVSTVDSKSAFS
        CS S   + TT+  S       +  D F+ +  ++ + D +    E+D Y+ E  +     FDIL W +   + Y +L+Q+ RD+LAI VSTV S+SAFS
Subjt:  CSSSRATSSTTSRTS------SSASDAFRIHFEDINEEDVLNVDTEVDIYLLEHHIAREENFDILEWQKENSSRYKVLSQMTRDILAILVSTVDSKSAFS

Query:  TSGRVIDLFRSTLVPTTVEAFVCVQNWL
          GRV+D +R+ L    VEA +C ++W+
Subjt:  TSGRVIDLFRSTLVPTTVEAFVCVQNWL

Q0JMB2 Zinc finger BED domain-containing protein RICESLEEPER 42.6e-1040.23Show/hide
Query:  EVDIYLLEHHIAREENFDILEWQKENSSRYKVLSQMTRDILAILVSTVDSKSAF---STSGRVIDLFRSTLVPTTVEAFVCVQNWLR
        E+++YL E    R  +FD+L+W ++N+ +Y  LS+M RD+LAI +STV   S+        R +D +RS+L P  VEA +C ++WL+
Subjt:  EVDIYLLEHHIAREENFDILEWQKENSSRYKVLSQMTRDILAILVSTVDSKSAF---STSGRVIDLFRSTLVPTTVEAFVCVQNWLR

Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 34.1e-1140.21Show/hide
Query:  TEVDIYLLEHHIAREENFDILEWQKENSSRYKVLSQMTRDILAILVSTVDSK----SAFSTSGRVIDLFRSTLVPTTVEAFVCVQNWLRSKTVNIES
        +E++ YL E  + R ++F+ILEW K N+ ++  LS+M RD+LAI +S V S     SA +T  +++D +RS+L P TVEA  C ++WL+      E+
Subjt:  TEVDIYLLEHHIAREENFDILEWQKENSSRYKVLSQMTRDILAILVSTVDSK----SAFSTSGRVIDLFRSTLVPTTVEAFVCVQNWLRSKTVNIES

Q9M2N5 Zinc finger BED domain-containing protein DAYSLEEPER4.8e-1241.38Show/hide
Query:  NVDTEVDIYLLEHHIAREENFDILEWQKENSSRYKVLSQMTRDILAILVSTVDSKSAFSTSGRVIDLFRSTLVPTTVEAFVCVQNWL
        N+ +E+D YL E  + R + FD+L+W K+N  +Y  LS+M RDIL+I VS       F    R +D ++++L P TVEA +C + WL
Subjt:  NVDTEVDIYLLEHHIAREENFDILEWQKENSSRYKVLSQMTRDILAILVSTVDSKSAFSTSGRVIDLFRSTLVPTTVEAFVCVQNWL

Arabidopsis top hitse value%identityAlignment
AT1G18560.1 BED zinc finger ;hAT family dimerisation domain1.4e-0630.34Show/hide
Query:  NVDTEVDIYLLEHHIAREENFDILEWQKENSSRYKVLSQMTRDILAILVSTVDSKSAFSTSGRVIDLFRSTLVPTTVEAFVCVQNWLRS
        NV  E+  YL E  +  +   D+L+W K NS RY  LS M RD LA+  ++   +  F   G  ID  +  +   + ++ +C+++W+ +
Subjt:  NVDTEVDIYLLEHHIAREENFDILEWQKENSSRYKVLSQMTRDILAILVSTVDSKSAFSTSGRVIDLFRSTLVPTTVEAFVCVQNWLRS

AT3G42170.1 BED zinc finger ;hAT family dimerisation domain3.4e-1341.38Show/hide
Query:  NVDTEVDIYLLEHHIAREENFDILEWQKENSSRYKVLSQMTRDILAILVSTVDSKSAFSTSGRVIDLFRSTLVPTTVEAFVCVQNWL
        N+ +E+D YL E  + R + FD+L+W K+N  +Y  LS+M RDIL+I VS       F    R +D ++++L P TVEA +C + WL
Subjt:  NVDTEVDIYLLEHHIAREENFDILEWQKENSSRYKVLSQMTRDILAILVSTVDSKSAFSTSGRVIDLFRSTLVPTTVEAFVCVQNWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATACTGGAAAAGAAGTGGGGAACAAGGTGGAGTCTGTTTTGAGAAGATTGTTTAGTGAATATTCTTTAAAGTATCATAGTCATGAATCATCTTCAAGCTCGATTGC
GTCATCTCAACTTCAAGTATTTAAGGATTGTACATGTATGAGTCAACCTTTAGTTTGTAGTAGTAGTAGAGCTACTTCTTCCACTACATCTAGAACTTCTTCTTCTGCTT
CAGACGCTTTTCGTATCCATTTTGAAGATATAAATGAAGAGGATGTCCTAAATGTGGATACAGAAGTTGATATTTACTTATTGGAGCATCATATTGCACGTGAAGAGAAC
TTTGATATCTTAGAGTGGCAGAAAGAAAATTCTTCAAGATATAAGGTTCTTAGTCAAATGACAAGAGATATTTTAGCAATTTTGGTATCCACAGTTGATTCTAAGTCTGC
ATTCTCTACTAGTGGTAGAGTGATTGATCTGTTTCGTTCCACTTTAGTTCCAACCACAGTTGAGGCATTCGTATGTGTACAAAATTGGCTACGTTCAAAAACAGTTAATA
TTGAATCTGTTGATGTTAAAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATACTGGAAAAGAAGTGGGGAACAAGGTGGAGTCTGTTTTGAGAAGATTGTTTAGTGAATATTCTTTAAAGTATCATAGTCATGAATCATCTTCAAGCTCGATTGC
GTCATCTCAACTTCAAGTATTTAAGGATTGTACATGTATGAGTCAACCTTTAGTTTGTAGTAGTAGTAGAGCTACTTCTTCCACTACATCTAGAACTTCTTCTTCTGCTT
CAGACGCTTTTCGTATCCATTTTGAAGATATAAATGAAGAGGATGTCCTAAATGTGGATACAGAAGTTGATATTTACTTATTGGAGCATCATATTGCACGTGAAGAGAAC
TTTGATATCTTAGAGTGGCAGAAAGAAAATTCTTCAAGATATAAGGTTCTTAGTCAAATGACAAGAGATATTTTAGCAATTTTGGTATCCACAGTTGATTCTAAGTCTGC
ATTCTCTACTAGTGGTAGAGTGATTGATCTGTTTCGTTCCACTTTAGTTCCAACCACAGTTGAGGCATTCGTATGTGTACAAAATTGGCTACGTTCAAAAACAGTTAATA
TTGAATCTGTTGATGTTAAAAAATAA
Protein sequenceShow/hide protein sequence
MDTGKEVGNKVESVLRRLFSEYSLKYHSHESSSSSIASSQLQVFKDCTCMSQPLVCSSSRATSSTTSRTSSSASDAFRIHFEDINEEDVLNVDTEVDIYLLEHHIAREEN
FDILEWQKENSSRYKVLSQMTRDILAILVSTVDSKSAFSTSGRVIDLFRSTLVPTTVEAFVCVQNWLRSKTVNIESVDVKK