; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G27610 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G27610
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionAvrRpt-cleavage domain-containing protein
Genome locationChr3:25167690..25172922
RNA-Seq ExpressionCSPI03G27610
SyntenyCSPI03G27610
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606311.1 RPM1-interacting protein 4, partial [Cucurbita argyrosperma subsp. sororia]1.7e-1168.75Show/hide
Query:  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDST--NSQNHEQNQK
        MAD E AVPKFGEW+DRDA  P+NYTAIF KVREERQDQ  R TPT   +S   ++QN EQNQK
Subjt:  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDST--NSQNHEQNQK

KAG7036250.1 hypothetical protein SDJN02_03052 [Cucurbita argyrosperma subsp. argyrosperma]1.3e-1167.69Show/hide
Query:  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDST--NSQNHEQNQKL
        MAD E AVPKFGEW+DRDA  P+NYTAIF KVREERQDQ  R TPT   +S   ++QN EQNQK+
Subjt:  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDST--NSQNHEQNQKL

XP_015086553.1 RPM1-interacting protein 4 isoform X1 [Solanum pennellii]2.5e-0752.46Show/hide
Query:  ADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDSTNSQNHEQNQK
        +D  AAVP+FGEWD+ D ++ +NYT IFNKVREE+Q     GTP+RT ++T   N E+ Q+
Subjt:  ADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDSTNSQNHEQNQK

XP_015086554.1 RPM1-interacting protein 4 isoform X2 [Solanum pennellii]2.5e-0752.46Show/hide
Query:  ADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDSTNSQNHEQNQK
        +D  AAVP+FGEWD+ D ++ +NYT IFNKVREE+Q     GTP+RT ++T   N E+ Q+
Subjt:  ADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDSTNSQNHEQNQK

XP_038888923.1 RPM1-interacting protein 4-like [Benincasa hispida]5.0e-1669.86Show/hide
Query:  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRG-TPTRTI-DSTNSQNHEQNQKLGQKIRWSR
        MADNEA VPKFGEWDDRDAKAPENYTAIF KVRE RQ+  +R  TP R+I +STN+QNHE NQK      W R
Subjt:  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRG-TPTRTI-DSTNSQNHEQNQKLGQKIRWSR

TrEMBL top hitse value%identityAlignment
A0A0A0L950 AvrRpt-cleavage domain-containing protein6.1e-5297.14Show/hide
Query:  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDSTNSQNHEQNQKLGQKIRWSRYCLEMDFYDRVAGELENIDEYSGYEGTYH
        MADNE AVPKFGEWDD DAKAPENYTAIFNKVREERQDQTVRGTPTR IDSTNSQNHEQNQKLGQKIRWSRYCLEMDFYDRVAGELENIDEYSGYEGTYH
Subjt:  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDSTNSQNHEQNQKLGQKIRWSRYCLEMDFYDRVAGELENIDEYSGYEGTYH

Query:  KRLSS
        KRLSS
Subjt:  KRLSS

A0A3Q7IYL7 AvrRpt-cleavage domain-containing protein4.5e-0750.82Show/hide
Query:  ADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDSTNSQNHEQNQK
        +D  AAVP+FGEWD+ D ++ +NYT IFNK REE+Q     GTP+RT ++T   N E+ Q+
Subjt:  ADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDSTNSQNHEQNQK

A0A6N2AQE8 AvrRpt-cleavage domain-containing protein1.2e-0752.46Show/hide
Query:  ADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDSTNSQNHEQNQK
        +D  AAVP+FGEWD+ D ++ +NYT IFNKVREE+Q     GTP+RT ++T   N E+ Q+
Subjt:  ADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDSTNSQNHEQNQK

M1CPC9 RIN4c protein7.8e-0751.67Show/hide
Query:  ADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDSTNSQNHEQNQ
        +D  AAVP+FGEWD+ D ++ +NYT IFNKVREE+Q     GTP+R  ++T   N E+ Q
Subjt:  ADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDSTNSQNHEQNQ

M1CPD2 RIN4c protein7.8e-0751.67Show/hide
Query:  ADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDSTNSQNHEQNQ
        +D  AAVP+FGEWD+ D ++ +NYT IFNKVREE+Q     GTP+R  ++T   N E+ Q
Subjt:  ADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDSTNSQNHEQNQ

SwissProt top hitse value%identityAlignment
O22633 Protein NOI45.9e-0441.67Show/hide
Query:  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRT
        M+D    +PKFGEWD  D  + E +T IFNK R+E++     G+P ++
Subjt:  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRT

Q8GYN5 RPM1-interacting protein 47.7e-0444.9Show/hide
Query:  VPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDSTNSQN
        VPKFG+WD+ +  + + YT IFNKVREER         +RT    +S+N
Subjt:  VPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDSTNSQN

Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein3.6e-0437.88Show/hide
Query:  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDSTNSQNHEQNQKLGQK
        MAD    +PKFGEWD  D  + E +T IFNK R E++      +P +     N +N E  +K  +K
Subjt:  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDSTNSQNHEQNQKLGQK

AT3G25070.1 RPM1 interacting protein 45.5e-0544.9Show/hide
Query:  VPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDSTNSQN
        VPKFG+WD+ +  + + YT IFNKVREER         +RT    +S+N
Subjt:  VPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDSTNSQN

AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein4.2e-0541.67Show/hide
Query:  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRT
        M+D    +PKFGEWD  D  + E +T IFNK R+E++     G+P ++
Subjt:  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRT

AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein2.7e-0441.3Show/hide
Query:  DNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRT
        D    +PKFGEWD  D  + E +T IFNK R+E++     G+P ++
Subjt:  DNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRT

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein2.7e-0441.3Show/hide
Query:  DNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRT
        D    +PKFGEWD  D  + E +T IFNK R+E++     G+P ++
Subjt:  DNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGATAACGAAGCTGCAGTTCCAAAATTTGGTGAATGGGATGATAGGGATGCAAAAGCACCGGAGAACTACACAGCTATTTTCAACAAGGTGCGGGAAGAGCGGCA
AGATCAAACAGTGCGAGGGACACCAACACGGACGATTGACAGCACAAACAGCCAAAATCATGAACAGAATCAAAAGTTGGGGCAAAAGATCCGATGGAGTAGGTATTGTT
TGGAGATGGATTTTTATGATCGGGTTGCTGGGGAGCTTGAAAATATAGATGAGTACTCAGGCTATGAGGGGACATACCACAAGAGGTTATCATCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGATAACGAAGCTGCAGTTCCAAAATTTGGTGAATGGGATGATAGGGATGCAAAAGCACCGGAGAACTACACAGCTATTTTCAACAAGGTGCGGGAAGAGCGGCA
AGATCAAACAGTGCGAGGGACACCAACACGGACGATTGACAGCACAAACAGCCAAAATCATGAACAGAATCAAAAGTTGGGGCAAAAGATCCGATGGAGTAGGTATTGTT
TGGAGATGGATTTTTATGATCGGGTTGCTGGGGAGCTTGAAAATATAGATGAGTACTCAGGCTATGAGGGGACATACCACAAGAGGTTATCATCGTAG
Protein sequenceShow/hide protein sequence
MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDSTNSQNHEQNQKLGQKIRWSRYCLEMDFYDRVAGELENIDEYSGYEGTYHKRLSS