; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G27850 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G27850
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionMuDRA-like transposase
Genome locationChr3:25355772..25356068
RNA-Seq ExpressionCSPI03G27850
SyntenyCSPI03G27850
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043247.1 hypothetical protein E6C27_scaffold110G001310 [Cucumis melo var. makuwa]2.3e-0750.59Show/hide
Query:  LSSLEPNVQLISKYNGVLNEVWDLSLLTINVRPLELGEDTYGLASMVQVESLDD---------------YDVDVDAEAFKVSEVD
        +SS E N+QLI  YNGVLN+V DLS LT N+ PL+L +DT  L SMV VESLDD                 VDV+ EAF+VS+ +
Subjt:  LSSLEPNVQLISKYNGVLNEVWDLSLLTINVRPLELGEDTYGLASMVQVESLDD---------------YDVDVDAEAFKVSEVD
KAA0067248.1 MuDRA-like transposase [Cucumis melo var. makuwa]1.5e-1172.41Show/hide
Query:  KNIKLSSLEPNVQLISKYNGVLNEVWDLSLLTINVRPLELGEDTYGLASMVQVESLDD
        KNIKLSSLEPN+QLI +YN VLNEV +LS LT+NV PLELG+DT  L SMV V+S DD
Subjt:  KNIKLSSLEPNVQLISKYNGVLNEVWDLSLLTINVRPLELGEDTYGLASMVQVESLDD
KGN58389.1 hypothetical protein Csa_001210 [Cucumis sativus]4.0e-4497.96Show/hide
Query:  MAKNIKLSSLEPNVQLISKYNGVLNEVWDLSLLTINVRPLELGEDTYGLASMVQVESLDDYDVDVDAEAFKVSEVDTYSSCKSYSIDSLQQRLNVHLM
        MAKNIKLSSLEPNV LISKYNGVLNEVWDLSLL+INVRPLELGEDTYGLASMVQVESLDDYDVDVDAEAFKVSEVDTYSSCKSYSIDSLQQRLNVHLM
Subjt:  MAKNIKLSSLEPNVQLISKYNGVLNEVWDLSLLTINVRPLELGEDTYGLASMVQVESLDDYDVDVDAEAFKVSEVDTYSSCKSYSIDSLQQRLNVHLM
TrEMBL top hitse value%identityAlignment
A0A0A0LBR6 Uncharacterized protein1.9e-4497.96Show/hide
Query:  MAKNIKLSSLEPNVQLISKYNGVLNEVWDLSLLTINVRPLELGEDTYGLASMVQVESLDDYDVDVDAEAFKVSEVDTYSSCKSYSIDSLQQRLNVHLM
        MAKNIKLSSLEPNV LISKYNGVLNEVWDLSLL+INVRPLELGEDTYGLASMVQVESLDDYDVDVDAEAFKVSEVDTYSSCKSYSIDSLQQRLNVHLM
Subjt:  MAKNIKLSSLEPNVQLISKYNGVLNEVWDLSLLTINVRPLELGEDTYGLASMVQVESLDDYDVDVDAEAFKVSEVDTYSSCKSYSIDSLQQRLNVHLM
A0A5A7TN70 Uncharacterized protein1.1e-0750.59Show/hide
Query:  LSSLEPNVQLISKYNGVLNEVWDLSLLTINVRPLELGEDTYGLASMVQVESLDD---------------YDVDVDAEAFKVSEVD
        +SS E N+QLI  YNGVLN+V DLS LT N+ PL+L +DT  L SMV VESLDD                 VDV+ EAF+VS+ +
Subjt:  LSSLEPNVQLISKYNGVLNEVWDLSLLTINVRPLELGEDTYGLASMVQVESLDD---------------YDVDVDAEAFKVSEVD
A0A5D3CFW2 MuDRA-like transposase7.5e-1272.41Show/hide
Query:  KNIKLSSLEPNVQLISKYNGVLNEVWDLSLLTINVRPLELGEDTYGLASMVQVESLDD
        KNIKLSSLEPN+QLI +YN VLNEV +LS LT+NV PLELG+DT  L SMV V+S DD
Subjt:  KNIKLSSLEPNVQLISKYNGVLNEVWDLSLLTINVRPLELGEDTYGLASMVQVESLDD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAAAACATTAAATTATCGTCACTTGAGCCCAACGTTCAATTAATTTCAAAGTACAATGGTGTCTTGAATGAGGTTTGGGATTTGAGTCTATTGACTATTAACGT
GCGTCCTTTAGAGTTGGGAGAAGATACATATGGATTAGCTAGCATGGTACAAGTAGAGTCATTAGACGATTATGATGTTGACGTGGATGCTGAAGCATTTAAGGTATCTG
AGGTGGATACGTACTCATCCTGCAAATCATATTCAATTGATAGTTTGCAACAGAGGTTGAACGTACATTTGATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAAAACATTAAATTATCGTCACTTGAGCCCAACGTTCAATTAATTTCAAAGTACAATGGTGTCTTGAATGAGGTTTGGGATTTGAGTCTATTGACTATTAACGT
GCGTCCTTTAGAGTTGGGAGAAGATACATATGGATTAGCTAGCATGGTACAAGTAGAGTCATTAGACGATTATGATGTTGACGTGGATGCTGAAGCATTTAAGGTATCTG
AGGTGGATACGTACTCATCCTGCAAATCATATTCAATTGATAGTTTGCAACAGAGGTTGAACGTACATTTGATGTAA
Protein sequenceShow/hide protein sequence
MAKNIKLSSLEPNVQLISKYNGVLNEVWDLSLLTINVRPLELGEDTYGLASMVQVESLDDYDVDVDAEAFKVSEVDTYSSCKSYSIDSLQQRLNVHLM