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CSPI03G28070 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G28070
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTPR_REGION domain-containing protein
Genome locationChr3:25649256..25655796
RNA-Seq ExpressionCSPI03G28070
SyntenyCSPI03G28070
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144414.1 uncharacterized protein LOC101220521 isoform X3 [Cucumis sativus]2.8e-5299.12Show/hide
Query:  EAPAVSFRNDGNSYNKSLDLQFEERLEAVKRSALEKKKADIKKEFGAIDYDAPVESEEKTIGLGTKVGIGVAVLVFGFVFALGDFLPSGSTGPVKDSVVE
        +APAVSFRNDGNSYNKSLDLQFEERLEAVKRSALEKKKADIKKEFGAIDYDAPVESEEKTIGLGTKVGIGVAVLVFGFVFALGDFLPSGSTGPVKDSVVE
Subjt:  EAPAVSFRNDGNSYNKSLDLQFEERLEAVKRSALEKKKADIKKEFGAIDYDAPVESEEKTIGLGTKVGIGVAVLVFGFVFALGDFLPSGSTGPVKDSVVE

Query:  NIKLSREEESNLK
        NIKLSREEESNLK
Subjt:  NIKLSREEESNLK

XP_008465106.1 PREDICTED: uncharacterized protein LOC103502794 [Cucumis melo]5.8e-5095.58Show/hide
Query:  EAPAVSFRNDGNSYNKSLDLQFEERLEAVKRSALEKKKADIKKEFGAIDYDAPVESEEKTIGLGTKVGIGVAVLVFGFVFALGDFLPSGSTGPVKDSVVE
        +APAVS RNDGNSYNKSLDLQFEERLEAVKRSALEKKKADIKKEFGAIDYDAPVESEEKTIG GTK+GIGVAVLVFGFVFALGDFLPSGSTGP KDSVVE
Subjt:  EAPAVSFRNDGNSYNKSLDLQFEERLEAVKRSALEKKKADIKKEFGAIDYDAPVESEEKTIGLGTKVGIGVAVLVFGFVFALGDFLPSGSTGPVKDSVVE

Query:  NIKLSREEESNLK
        NIKLSREEESNLK
Subjt:  NIKLSREEESNLK

XP_031738478.1 uncharacterized protein LOC101220521 isoform X1 [Cucumis sativus]8.7e-5482.99Show/hide
Query:  KERRTVAVARVVLDVGSNDKETIGDNMLLFGYEDEAPAVSFRNDGNSYNKSLDLQFEERLEAVKRSALEKKKADIKKEFGAIDYDAPVESEEKTIGLGTK
        KE+  V   R  +   S+   T   N   FG   EAPAVSFRNDGNSYNKSLDLQFEERLEAVKRSALEKKKADIKKEFGAIDYDAPVESEEKTIGLGTK
Subjt:  KERRTVAVARVVLDVGSNDKETIGDNMLLFGYEDEAPAVSFRNDGNSYNKSLDLQFEERLEAVKRSALEKKKADIKKEFGAIDYDAPVESEEKTIGLGTK

Query:  VGIGVAVLVFGFVFALGDFLPSGSTGPVKDSVVENIKLSREEESNLK
        VGIGVAVLVFGFVFALGDFLPSGSTGPVKDSVVENIKLSREEESNLK
Subjt:  VGIGVAVLVFGFVFALGDFLPSGSTGPVKDSVVENIKLSREEESNLK

XP_031738479.1 uncharacterized protein LOC101220521 isoform X2 [Cucumis sativus]1.3e-52100Show/hide
Query:  EAPAVSFRNDGNSYNKSLDLQFEERLEAVKRSALEKKKADIKKEFGAIDYDAPVESEEKTIGLGTKVGIGVAVLVFGFVFALGDFLPSGSTGPVKDSVVE
        EAPAVSFRNDGNSYNKSLDLQFEERLEAVKRSALEKKKADIKKEFGAIDYDAPVESEEKTIGLGTKVGIGVAVLVFGFVFALGDFLPSGSTGPVKDSVVE
Subjt:  EAPAVSFRNDGNSYNKSLDLQFEERLEAVKRSALEKKKADIKKEFGAIDYDAPVESEEKTIGLGTKVGIGVAVLVFGFVFALGDFLPSGSTGPVKDSVVE

Query:  NIKLSREEESNLK
        NIKLSREEESNLK
Subjt:  NIKLSREEESNLK

XP_038881142.1 uncharacterized protein LOC120072738 [Benincasa hispida]2.7e-4789.57Show/hide
Query:  EDEAPAVSFRNDGNSYNKSLDLQFEERLEAVKRSALEKKKADIKKEFGAIDYDAPVESEEKTIGLGTKVGIGVAVLVFGFVFALGDFLPSGSTGPVKDSV
        + EAPAVSFR+DGNSYNKSLDLQFE+RLEAVKRSALEKKKADI+KEFGAIDYDAPV+SEEKTIGLGTK+GIGVAVLVFG VFALGDFLPSGS  PVKDSV
Subjt:  EDEAPAVSFRNDGNSYNKSLDLQFEERLEAVKRSALEKKKADIKKEFGAIDYDAPVESEEKTIGLGTKVGIGVAVLVFGFVFALGDFLPSGSTGPVKDSV

Query:  VENIKLSREEESNLK
        VE+IKLSREE SNLK
Subjt:  VENIKLSREEESNLK

TrEMBL top hitse value%identityAlignment
A0A0A0L8X7 Uncharacterized protein1.4e-5299.12Show/hide
Query:  EAPAVSFRNDGNSYNKSLDLQFEERLEAVKRSALEKKKADIKKEFGAIDYDAPVESEEKTIGLGTKVGIGVAVLVFGFVFALGDFLPSGSTGPVKDSVVE
        +APAVSFRNDGNSYNKSLDLQFEERLEAVKRSALEKKKADIKKEFGAIDYDAPVESEEKTIGLGTKVGIGVAVLVFGFVFALGDFLPSGSTGPVKDSVVE
Subjt:  EAPAVSFRNDGNSYNKSLDLQFEERLEAVKRSALEKKKADIKKEFGAIDYDAPVESEEKTIGLGTKVGIGVAVLVFGFVFALGDFLPSGSTGPVKDSVVE

Query:  NIKLSREEESNLK
        NIKLSREEESNLK
Subjt:  NIKLSREEESNLK

A0A1S3CN41 uncharacterized protein LOC1035027942.8e-5095.58Show/hide
Query:  EAPAVSFRNDGNSYNKSLDLQFEERLEAVKRSALEKKKADIKKEFGAIDYDAPVESEEKTIGLGTKVGIGVAVLVFGFVFALGDFLPSGSTGPVKDSVVE
        +APAVS RNDGNSYNKSLDLQFEERLEAVKRSALEKKKADIKKEFGAIDYDAPVESEEKTIG GTK+GIGVAVLVFGFVFALGDFLPSGSTGP KDSVVE
Subjt:  EAPAVSFRNDGNSYNKSLDLQFEERLEAVKRSALEKKKADIKKEFGAIDYDAPVESEEKTIGLGTKVGIGVAVLVFGFVFALGDFLPSGSTGPVKDSVVE

Query:  NIKLSREEESNLK
        NIKLSREEESNLK
Subjt:  NIKLSREEESNLK

A0A6J1GWF7 uncharacterized protein LOC111457503 isoform X13.8e-3980.53Show/hide
Query:  EAPAVSFRNDGNSYNKSLDLQFEERLEAVKRSALEKKKADIKKEFGAIDYDAPVESEEKTIGLGTKVGIGVAVLVFGFVFALGDFLPSGSTGPVKDSVVE
        +APAV+ R D NSYN SLD  FE+RLEAVKRSALEKKKAD KKEFGAIDYDAPVE EEKTIGLGTK+GIGVAVLVFG VFALGDFLPSGS  PV+DS V 
Subjt:  EAPAVSFRNDGNSYNKSLDLQFEERLEAVKRSALEKKKADIKKEFGAIDYDAPVESEEKTIGLGTKVGIGVAVLVFGFVFALGDFLPSGSTGPVKDSVVE

Query:  NIKLSREEESNLK
        + KLS+EEESNL+
Subjt:  NIKLSREEESNLK

A0A6J1IX11 uncharacterized protein LOC111479948 isoform X23.8e-3982.3Show/hide
Query:  EAPAVSFRNDGNSYNKSLDLQFEERLEAVKRSALEKKKADIKKEFGAIDYDAPVESEEKTIGLGTKVGIGVAVLVFGFVFALGDFLPSGSTGPVKDSVVE
        +APAV+ R D NSYNKSLD  FE+RLEAVKRSALEKKKAD KKEFGAIDYDAPVE EEKTIGLGTK+GIGVAVLVFG VFALGDFLPSGS  PV+DSVV 
Subjt:  EAPAVSFRNDGNSYNKSLDLQFEERLEAVKRSALEKKKADIKKEFGAIDYDAPVESEEKTIGLGTKVGIGVAVLVFGFVFALGDFLPSGSTGPVKDSVVE

Query:  NIKLSREEESNLK
        + KLS+EEESNL+
Subjt:  NIKLSREEESNLK

A0A6J1IZV0 uncharacterized protein LOC111479948 isoform X11.6e-4082.3Show/hide
Query:  EAPAVSFRNDGNSYNKSLDLQFEERLEAVKRSALEKKKADIKKEFGAIDYDAPVESEEKTIGLGTKVGIGVAVLVFGFVFALGDFLPSGSTGPVKDSVVE
        +APAV+ R D NSYNKSLD  FE+RLEAVKRSALEKKKAD KKEFGAIDYDAPVE EEKTIGLGTK+GIGVAVLVFG VFALGDFLPSGS  PV+DSVV 
Subjt:  EAPAVSFRNDGNSYNKSLDLQFEERLEAVKRSALEKKKADIKKEFGAIDYDAPVESEEKTIGLGTKVGIGVAVLVFGFVFALGDFLPSGSTGPVKDSVVE

Query:  NIKLSREEESNLK
        + KLS+EEESNL+
Subjt:  NIKLSREEESNLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G78915.1 Tetratricopeptide repeat (TPR)-like superfamily protein6.5e-3156.64Show/hide
Query:  EAPAVSFRNDGNSYNKSLDLQFEERLEAVKRSALEKKKADIKKEFGAIDYDAPVESEEKTIGLGTKVGIGVAVLVFGFVFALGDFLPSGSTGPVKDSVVE
        +AP ++ + +G S  +S D+ F+ERLE ++RSALE+KK ++ KEFG IDYDAPV+S++KTIGLGTKVG+G+AV+VFG VFALGDFLP+GS  P K++ V 
Subjt:  EAPAVSFRNDGNSYNKSLDLQFEERLEAVKRSALEKKKADIKKEFGAIDYDAPVESEEKTIGLGTKVGIGVAVLVFGFVFALGDFLPSGSTGPVKDSVVE

Query:  NIKLSREEESNLK
          ++S EE++ L+
Subjt:  NIKLSREEESNLK

AT1G78915.2 Tetratricopeptide repeat (TPR)-like superfamily protein4.3e-2748.46Show/hide
Query:  EAPAVSFRNDGNSYNKSLDLQFEERLEAVKRSALEKKKADIKKEFGAIDYDAPVESEEKTIGLGTKVGIGVAVLVFGFVFALGDFLPSGS----------
        +AP ++ + +G S  +S D+ F+ERLE ++RSALE+KK ++ KEFG IDYDAPV+S++KTIGLGTKVG+G+AV+VFG VFALGDFLP+G           
Subjt:  EAPAVSFRNDGNSYNKSLDLQFEERLEAVKRSALEKKKADIKKEFGAIDYDAPVESEEKTIGLGTKVGIGVAVLVFGFVFALGDFLPSGS----------

Query:  -------TGPVKDSVVENIKLSREEESNLK
                 P K++ V   ++S EE++ L+
Subjt:  -------TGPVKDSVVENIKLSREEESNLK

AT1G78915.3 Tetratricopeptide repeat (TPR)-like superfamily protein9.7e-2747.37Show/hide
Query:  EAPAVSFRNDGNSYNKSLDLQFEERLEAVKRSALEKKKADIKKEFGAIDYDAPVESEEKTIGLGTKVGIGVAVLVFGFVFALGDFLPSGS----------
        +AP ++ + +G S  +S D+ F+ERLE ++RSALE+KK ++ KEFG IDYDAPV+S++KTIGLGTKVG+G+AV+VFG VFALGDFLP+G           
Subjt:  EAPAVSFRNDGNSYNKSLDLQFEERLEAVKRSALEKKKADIKKEFGAIDYDAPVESEEKTIGLGTKVGIGVAVLVFGFVFALGDFLPSGS----------

Query:  ----------TGPVKDSVVENIKLSREEESNLK
                    P K++ V   ++S EE++ L+
Subjt:  ----------TGPVKDSVVENIKLSREEESNLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCTTTTGATGAGGGTTCTCTTCTTCCAATATCCGAGACCCATGACATTCCAAGTTAGAATAATCATTAAGAAGTACGAGCCCTTTGAGAGTAGAGGCCTGCCCTT
TTCTTCCTTTGAAGATAGCAGTACCTTTCAAGTTTCAAATGTGGTTTATGAGAAGGAAAGAAGAACGGTCGCGGTGGCTAGGGTTGTCCTTGATGTTGGTTCTAACGACA
AAGAGACAATTGGAGACAATATGCTTCTTTTTGGGTATGAAGATGAGGCACCTGCTGTGAGTTTCCGTAATGATGGAAATTCTTATAACAAATCTTTGGACCTTCAATTC
GAAGAGCGACTTGAAGCAGTTAAAAGATCAGCACTTGAAAAGAAAAAGGCAGACATTAAAAAAGAATTTGGAGCAATTGACTATGATGCACCGGTGGAATCGGAAGAGAA
AACAATTGGACTTGGTACCAAGGTTGGAATAGGTGTCGCTGTTTTGGTCTTTGGCTTTGTTTTTGCGCTCGGAGACTTTCTGCCCTCTGGAAGTACCGGTCCTGTTAAGG
ATTCTGTGGTGGAAAATATCAAACTATCGAGAGAAGAAGAAAGTAATCTTAAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGCTTTTGATGAGGGTTCTCTTCTTCCAATATCCGAGACCCATGACATTCCAAGTTAGAATAATCATTAAGAAGTACGAGCCCTTTGAGAGTAGAGGCCTGCCCTT
TTCTTCCTTTGAAGATAGCAGTACCTTTCAAGTTTCAAATGTGGTTTATGAGAAGGAAAGAAGAACGGTCGCGGTGGCTAGGGTTGTCCTTGATGTTGGTTCTAACGACA
AAGAGACAATTGGAGACAATATGCTTCTTTTTGGGTATGAAGATGAGGCACCTGCTGTGAGTTTCCGTAATGATGGAAATTCTTATAACAAATCTTTGGACCTTCAATTC
GAAGAGCGACTTGAAGCAGTTAAAAGATCAGCACTTGAAAAGAAAAAGGCAGACATTAAAAAAGAATTTGGAGCAATTGACTATGATGCACCGGTGGAATCGGAAGAGAA
AACAATTGGACTTGGTACCAAGGTTGGAATAGGTGTCGCTGTTTTGGTCTTTGGCTTTGTTTTTGCGCTCGGAGACTTTCTGCCCTCTGGAAGTACCGGTCCTGTTAAGG
ATTCTGTGGTGGAAAATATCAAACTATCGAGAGAAGAAGAAAGTAATCTTAAG
Protein sequenceShow/hide protein sequence
MVLLMRVLFFQYPRPMTFQVRIIIKKYEPFESRGLPFSSFEDSSTFQVSNVVYEKERRTVAVARVVLDVGSNDKETIGDNMLLFGYEDEAPAVSFRNDGNSYNKSLDLQF
EERLEAVKRSALEKKKADIKKEFGAIDYDAPVESEEKTIGLGTKVGIGVAVLVFGFVFALGDFLPSGSTGPVKDSVVENIKLSREEESNLK