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CSPI03G28220 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G28220
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTransmembrane protein, putative
Genome locationChr3:25846628..25850055
RNA-Seq ExpressionCSPI03G28220
SyntenyCSPI03G28220
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571254.1 hypothetical protein SDJN03_30169, partial [Cucurbita argyrosperma subsp. sororia]4.9e-2660.31Show/hide
Query:  KKVKLVLRMLLLLLLVLVGIVKANEEAANNI---------YSETSTPNPPNSYWEEVRKVVNKAYTYLFPPKIDFRPGKAVEDDSGVSVKNGNVNVKDAV
        KK   VL +L+L ++V+VG+ KA+EEA NNI          S  S+P+PPNSYWEEVRKVVN+A T LFPPKIDFRPG  VED       NGN N+K+++
Subjt:  KKVKLVLRMLLLLLLVLVGIVKANEEAANNI---------YSETSTPNPPNSYWEEVRKVVNKAYTYLFPPKIDFRPGKAVEDDSGVSVKNGNVNVKDAV

Query:  TKSFEKTKEMVEDSAKAAAQTLQKPPPHSEL
        TKSF  TK+MVEDSA AAAQTLQ P P SEL
Subjt:  TKSFEKTKEMVEDSAKAAAQTLQKPPPHSEL

KAG6571257.1 hypothetical protein SDJN03_30172, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2560.31Show/hide
Query:  KKVKLVLRMLLLLLLVLVGIVKANEEAANNI---------YSETSTPNPPNSYWEEVRKVVNKAYTYLFPPKIDFRPGKAVEDDSGVSVKNGNVNVKDAV
        KK   VL +L+L ++V+VG+ KA+EEA NNI          S  S+P+PPNSYWEEVRKVVN+A T LFPPKIDFR G  VED       NGN N+K+++
Subjt:  KKVKLVLRMLLLLLLVLVGIVKANEEAANNI---------YSETSTPNPPNSYWEEVRKVVNKAYTYLFPPKIDFRPGKAVEDDSGVSVKNGNVNVKDAV

Query:  TKSFEKTKEMVEDSAKAAAQTLQKPPPHSEL
        TKSF  TK+MVEDSAKAAAQTLQ P P SEL
Subjt:  TKSFEKTKEMVEDSAKAAAQTLQKPPPHSEL

XP_008460283.1 PREDICTED: uncharacterized protein LOC103499155 [Cucumis melo]1.2e-5188.28Show/hide
Query:  MEM-EKKKVKLVLRMLLLLLLVLVGIVKANEEAANNIYSETSTPNPPNSYWEEVRKVVNKAYTYLFPPKIDFRPGKAVEDDSGVSVKNGNVNVKDAVTKS
        MEM EKKK+K+VLRMLLLLLL+LVGI  AN+EAANN+YSETSTPNPPNSYWEEVRKVVNKAY+YLFPPKIDFRPGKAVEDDSG+SV++G  NVK+AVTKS
Subjt:  MEM-EKKKVKLVLRMLLLLLLVLVGIVKANEEAANNIYSETSTPNPPNSYWEEVRKVVNKAYTYLFPPKIDFRPGKAVEDDSGVSVKNGNVNVKDAVTKS

Query:  FEKTKEMVEDSAKAAAQTLQKPPPHSEL
        FEKTKEMVEDSAKAAAQTLQKPPPHSEL
Subjt:  FEKTKEMVEDSAKAAAQTLQKPPPHSEL

XP_022948557.1 uncharacterized protein LOC111452199 [Cucurbita moschata]1.4e-2561.86Show/hide
Query:  LLVLVGIVKANEEAANNI---------YSETSTPNPPNSYWEEVRKVVNKAYTYLFPPKIDFRPGKAVEDDSGVSVKNGNVNVKDAVTKSFEKTKEMVED
        ++++VG+ KA+EEA NNI          S  S+P PPNSYWEEVRKVVN+A T LFPPKIDFRPGK VED       NGN N+K+++TKSF  TK+MVED
Subjt:  LLVLVGIVKANEEAANNI---------YSETSTPNPPNSYWEEVRKVVNKAYTYLFPPKIDFRPGKAVEDDSGVSVKNGNVNVKDAVTKSFEKTKEMVED

Query:  SAKAAAQTLQKPPPHSEL
        SAKAAAQTL +P P SEL
Subjt:  SAKAAAQTLQKPPPHSEL

XP_031737573.1 uncharacterized protein LOC101222094 [Cucumis sativus]5.2e-6099.21Show/hide
Query:  MEMEKKKVKLVLRMLLLLLLVLVGIVKANEEAANNIYSETSTPNPPNSYWEEVRKVVNKAYTYLFPPKIDFRPGKAVEDDSGVSVKNGNVNVKDAVTKSF
        MEMEKKKVKLVLRMLLLLLLVLVGIVKANEEAANNIYSETSTPNPPNSYWEEVRKVVNKAYTYLFPPKIDFRPGKAVEDDSGVSVKNGNVNVK+AVTKSF
Subjt:  MEMEKKKVKLVLRMLLLLLLVLVGIVKANEEAANNIYSETSTPNPPNSYWEEVRKVVNKAYTYLFPPKIDFRPGKAVEDDSGVSVKNGNVNVKDAVTKSF

Query:  EKTKEMVEDSAKAAAQTLQKPPPHSEL
        EKTKEMVEDSAKAAAQTLQKPPPHSEL
Subjt:  EKTKEMVEDSAKAAAQTLQKPPPHSEL

TrEMBL top hitse value%identityAlignment
A0A0A0L904 Uncharacterized protein2.5e-6099.21Show/hide
Query:  MEMEKKKVKLVLRMLLLLLLVLVGIVKANEEAANNIYSETSTPNPPNSYWEEVRKVVNKAYTYLFPPKIDFRPGKAVEDDSGVSVKNGNVNVKDAVTKSF
        MEMEKKKVKLVLRMLLLLLLVLVGIVKANEEAANNIYSETSTPNPPNSYWEEVRKVVNKAYTYLFPPKIDFRPGKAVEDDSGVSVKNGNVNVK+AVTKSF
Subjt:  MEMEKKKVKLVLRMLLLLLLVLVGIVKANEEAANNIYSETSTPNPPNSYWEEVRKVVNKAYTYLFPPKIDFRPGKAVEDDSGVSVKNGNVNVKDAVTKSF

Query:  EKTKEMVEDSAKAAAQTLQKPPPHSEL
        EKTKEMVEDSAKAAAQTLQKPPPHSEL
Subjt:  EKTKEMVEDSAKAAAQTLQKPPPHSEL

A0A1S3CDE0 uncharacterized protein LOC1034991555.6e-5288.28Show/hide
Query:  MEM-EKKKVKLVLRMLLLLLLVLVGIVKANEEAANNIYSETSTPNPPNSYWEEVRKVVNKAYTYLFPPKIDFRPGKAVEDDSGVSVKNGNVNVKDAVTKS
        MEM EKKK+K+VLRMLLLLLL+LVGI  AN+EAANN+YSETSTPNPPNSYWEEVRKVVNKAY+YLFPPKIDFRPGKAVEDDSG+SV++G  NVK+AVTKS
Subjt:  MEM-EKKKVKLVLRMLLLLLLVLVGIVKANEEAANNIYSETSTPNPPNSYWEEVRKVVNKAYTYLFPPKIDFRPGKAVEDDSGVSVKNGNVNVKDAVTKS

Query:  FEKTKEMVEDSAKAAAQTLQKPPPHSEL
        FEKTKEMVEDSAKAAAQTLQKPPPHSEL
Subjt:  FEKTKEMVEDSAKAAAQTLQKPPPHSEL

A0A5A7VE77 Putative transmembrane protein5.6e-5288.28Show/hide
Query:  MEM-EKKKVKLVLRMLLLLLLVLVGIVKANEEAANNIYSETSTPNPPNSYWEEVRKVVNKAYTYLFPPKIDFRPGKAVEDDSGVSVKNGNVNVKDAVTKS
        MEM EKKK+K+VLRMLLLLLL+LVGI  AN+EAANN+YSETSTPNPPNSYWEEVRKVVNKAY+YLFPPKIDFRPGKAVEDDSG+SV++G  NVK+AVTKS
Subjt:  MEM-EKKKVKLVLRMLLLLLLVLVGIVKANEEAANNIYSETSTPNPPNSYWEEVRKVVNKAYTYLFPPKIDFRPGKAVEDDSGVSVKNGNVNVKDAVTKS

Query:  FEKTKEMVEDSAKAAAQTLQKPPPHSEL
        FEKTKEMVEDSAKAAAQTLQKPPPHSEL
Subjt:  FEKTKEMVEDSAKAAAQTLQKPPPHSEL

A0A6J1D2A4 uncharacterized protein LOC1110169336.3e-1150Show/hide
Query:  ANNIYSETSTPNP--PNSYWEEVRK-VVNKAYTYLFPPKIDFRPGKAVEDDSGVSVKNGNVNVKDAVTKSFEKTKEMVEDSAKAAA
        A ++++ TS   P     YW+ +R  V++    YLFPPKIDFRPGKA +D+ G    +GN NVK+A+TKSF++ K++V+DSAKAAA
Subjt:  ANNIYSETSTPNP--PNSYWEEVRK-VVNKAYTYLFPPKIDFRPGKAVEDDSGVSVKNGNVNVKDAVTKSFEKTKEMVEDSAKAAA

A0A6J1G9K3 uncharacterized protein LOC1114521996.9e-2661.86Show/hide
Query:  LLVLVGIVKANEEAANNI---------YSETSTPNPPNSYWEEVRKVVNKAYTYLFPPKIDFRPGKAVEDDSGVSVKNGNVNVKDAVTKSFEKTKEMVED
        ++++VG+ KA+EEA NNI          S  S+P PPNSYWEEVRKVVN+A T LFPPKIDFRPGK VED       NGN N+K+++TKSF  TK+MVED
Subjt:  LLVLVGIVKANEEAANNI---------YSETSTPNPPNSYWEEVRKVVNKAYTYLFPPKIDFRPGKAVEDDSGVSVKNGNVNVKDAVTKSFEKTKEMVED

Query:  SAKAAAQTLQKPPPHSEL
        SAKAAAQTL +P P SEL
Subjt:  SAKAAAQTLQKPPPHSEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G64820.1 unknown protein2.3e-0526.32Show/hide
Query:  LLLVLVGIVKANEEAANNIYSETSTPN-------------PPNSYWEEVRKVVNKAYTYLFPPKIDFRPGKAVEDDSGVSVKNGNVNVKDAVTKSFEKTK
        ++++L+  V A+   +++   +   P+             PP+S WE ++  + K    L+PP +DFR      D S +  ++    V++A T+S E +K
Subjt:  LLLVLVGIVKANEEAANNIYSETSTPN-------------PPNSYWEEVRKVVNKAYTYLFPPKIDFRPGKAVEDDSGVSVKNGNVNVKDAVTKSFEKTK

Query:  EMVEDSAKAAAQTL
        E +E+SAK A   +
Subjt:  EMVEDSAKAAAQTL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATGGAGAAGAAGAAGGTGAAATTAGTATTAAGGATGCTGCTGTTACTGCTGCTTGTTCTTGTTGGTATTGTGAAGGCTAATGAAGAAGCAGCAAATAACATATA
TTCAGAAACATCAACACCAAATCCTCCAAACTCCTATTGGGAAGAAGTTCGAAAGGTGGTGAATAAAGCCTACACCTATCTGTTTCCTCCAAAAATAGATTTCCGACCAG
GAAAGGCTGTAGAAGATGATTCTGGAGTGAGTGTGAAGAATGGGAATGTTAATGTGAAGGACGCTGTTACAAAGAGCTTCGAAAAGACGAAAGAAATGGTGGAGGATTCC
GCTAAAGCTGCCGCCCAAACGCTTCAAAAACCACCACCCCATTCCGAACTCTAG
mRNA sequenceShow/hide mRNA sequence
TAATGGAAGCATCTGTTCGATGAGAGGGCAAGAAGAGTGGTGTTGTTGAAGATGATCAAGAAGACAATGAAAAAACAAATAGAAAGGGGACAGGTGCTCCAAAACCCAAA
GCATATGGTGAGGTGTAAGAAAAGTAGAATATTTAAGTGTCCACCTTGCAATCTTCGAGGAACTTCCCCTCCCACCAGAAGCTAAAACCCCCCCATCTTGGCCTTCCTTT
TTTACCCATAAACATAATTAGAAAAATCAACGGACAACAATGGAAATGGAGAAGAAGAAGGTGAAATTAGTATTAAGGATGCTGCTGTTACTGCTGCTTGTTCTTGTTGG
TATTGTGAAGGCTAATGAAGAAGCAGCAAATAACATATATTCAGAAACATCAACACCAAATCCTCCAAACTCCTATTGGGAAGAAGTTCGAAAGGTGGTGAATAAAGCCT
ACACCTATCTGTTTCCTCCAAAAATAGATTTCCGACCAGGAAAGGCTGTAGAAGATGATTCTGGAGTGAGTGTGAAGAATGGGAATGTTAATGTGAAGGACGCTGTTACA
AAGAGCTTCGAAAAGACGAAAGAAATGGTGGAGGATTCCGCTAAAGCTGCCGCCCAAACGCTTCAAAAACCACCACCCCATTCCGAACTCTAGGAATACCAATTCCATCC
CTTCCTCTTTCTTCTATAATTCTTGTAATGTCTTCTTGTTATTTGTTTGTTTTTGGTGAATGATGAATTATATGCTCTACAAGATTTAGATGTTTAAGGATGGGAATATG
GAACTCTGCCACCACTCCAATGGATTGGGCTCCCATTTTAACCCATACATCATTCTCTCTCCATATATTTTAGTGTTTTTTTTCCTTTGGTC
Protein sequenceShow/hide protein sequence
MEMEKKKVKLVLRMLLLLLLVLVGIVKANEEAANNIYSETSTPNPPNSYWEEVRKVVNKAYTYLFPPKIDFRPGKAVEDDSGVSVKNGNVNVKDAVTKSFEKTKEMVEDS
AKAAAQTLQKPPPHSEL