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CSPI03G28310 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G28310
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr3:25919905..25920267
RNA-Seq ExpressionCSPI03G28310
SyntenyCSPI03G28310
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053479.1 uncharacterized protein E6C27_scaffold190G00270 [Cucumis melo var. makuwa]1.7e-4990.08Show/hide
Query:  MAGSYEDHQEELRRCGIQFKRRRRMAVARLGGKRSGRIVGWGRIVRKIRLKWVKMKCIEMVKKMKKYYKELMKDIMEAGAYGYPDSYQHRLLLETSFAIP
        MA SY DHQEELRR GIQF+RRR+MAVARLGGKRSGRI+ WGRIVRKIRLKWVKMKCIEMVKKMKKYYK+LMKDIMEAGAYGY DSYQHRLLLETSFAIP
Subjt:  MAGSYEDHQEELRRCGIQFKRRRRMAVARLGGKRSGRIVGWGRIVRKIRLKWVKMKCIEMVKKMKKYYKELMKDIMEAGAYGYPDSYQHRLLLETSFAIP

Query:  ILGVSLSTHSS-IHAATAATS
        ILGVSLSTHSS IHAA AA+S
Subjt:  ILGVSLSTHSS-IHAATAATS

KAG6581768.1 hypothetical protein SDJN03_21770, partial [Cucurbita argyrosperma subsp. sororia]1.9e-3276.92Show/hide
Query:  RCGIQFKRRRRMAVARLGGKRSGRIVGWGRIVRKIRLKWVKMKCIEMVKKMKKYYKELMKDIMEAGAYGYPDSYQHRLLLETSFAIPILGVSLSTHSSIH
        R G++F RRRRM VARLGGKRSGR+V WGR++RKIRL+WVK+KCI MVKKMK+YY  LMKDI+EAGAY +  SYQHR+LLETSFAIPILGVSLSTHSS+ 
Subjt:  RCGIQFKRRRRMAVARLGGKRSGRIVGWGRIVRKIRLKWVKMKCIEMVKKMKKYYKELMKDIMEAGAYGYPDSYQHRLLLETSFAIPILGVSLSTHSSIH

Query:  AATA
        AAT+
Subjt:  AATA

XP_011652825.1 uncharacterized protein LOC105435118 [Cucumis sativus]6.6e-5798.33Show/hide
Query:  MAGSYEDHQEELRRCGIQFKRRRRMAVARLGGKRSGRIVGWGRIVRKIRLKWVKMKCIEMVKKMKKYYKELMKDIMEAGAYGYPDSYQHRLLLETSFAIP
        MAGSYEDHQEELRRCGIQF+RRRRMAVARLGGKRSGRIVGWGRIVRKIRLKWVKMKCIEMVKKMKKYYKELMKDIMEAGAYGY DSYQHRLLLETSFAIP
Subjt:  MAGSYEDHQEELRRCGIQFKRRRRMAVARLGGKRSGRIVGWGRIVRKIRLKWVKMKCIEMVKKMKKYYKELMKDIMEAGAYGYPDSYQHRLLLETSFAIP

Query:  ILGVSLSTHSSIHAATAATS
        ILGVSLSTHSSIHAATAATS
Subjt:  ILGVSLSTHSSIHAATAATS

XP_022948735.1 uncharacterized protein LOC111452314 [Cucurbita moschata]1.5e-3280Show/hide
Query:  RCGIQFKRRRRMAVARLGGKRSGRIVGWGRIVRKIRLKWVKMKCIEMVKKMKKYYKELMKDIMEAGAYGYPDSYQHRLLLETSFAIPILGVSLSTHSSIH
        R GIQF RRRRMAVARLGGKRSGR+V WGR +RKIRL+WVK+KCI MVKK+KKY   LMKD+MEAGAYG  DSYQHRLLLETSFAIPILGVS STHS+ H
Subjt:  RCGIQFKRRRRMAVARLGGKRSGRIVGWGRIVRKIRLKWVKMKCIEMVKKMKKYYKELMKDIMEAGAYGYPDSYQHRLLLETSFAIPILGVSLSTHSSIH

Query:  AATAA
        AA +A
Subjt:  AATAA

XP_038891072.1 uncharacterized protein LOC120080455 [Benincasa hispida]1.4e-3574.4Show/hide
Query:  MAGSYEDHQEE----LR---RCGIQFKRRRRMAVARLGGKRSGRIVGWGRIVRKIRLKWVKMKCIEMVKKMKKYYKELMKDIMEAGAYGY-PDSYQHRLL
        MA SYE  + +    LR   R GIQF RRRRM VARLGGKRSGRIV WGR++RKIRL+WVK+KCI MVKK+KKYY  LMKDIME GAYGY  DSYQHRLL
Subjt:  MAGSYEDHQEE----LR---RCGIQFKRRRRMAVARLGGKRSGRIVGWGRIVRKIRLKWVKMKCIEMVKKMKKYYKELMKDIMEAGAYGY-PDSYQHRLL

Query:  LETSFAIPILGVSLSTHSSIHAATA
        +ETSFAIPILGVSLSTHSSI A T+
Subjt:  LETSFAIPILGVSLSTHSSIHAATA

TrEMBL top hitse value%identityAlignment
A0A0A0LBW7 Uncharacterized protein3.2e-5798.33Show/hide
Query:  MAGSYEDHQEELRRCGIQFKRRRRMAVARLGGKRSGRIVGWGRIVRKIRLKWVKMKCIEMVKKMKKYYKELMKDIMEAGAYGYPDSYQHRLLLETSFAIP
        MAGSYEDHQEELRRCGIQF+RRRRMAVARLGGKRSGRIVGWGRIVRKIRLKWVKMKCIEMVKKMKKYYKELMKDIMEAGAYGY DSYQHRLLLETSFAIP
Subjt:  MAGSYEDHQEELRRCGIQFKRRRRMAVARLGGKRSGRIVGWGRIVRKIRLKWVKMKCIEMVKKMKKYYKELMKDIMEAGAYGYPDSYQHRLLLETSFAIP

Query:  ILGVSLSTHSSIHAATAATS
        ILGVSLSTHSSIHAATAATS
Subjt:  ILGVSLSTHSSIHAATAATS

A0A5D3DCV1 Uncharacterized protein8.5e-5090.08Show/hide
Query:  MAGSYEDHQEELRRCGIQFKRRRRMAVARLGGKRSGRIVGWGRIVRKIRLKWVKMKCIEMVKKMKKYYKELMKDIMEAGAYGYPDSYQHRLLLETSFAIP
        MA SY DHQEELRR GIQF+RRR+MAVARLGGKRSGRI+ WGRIVRKIRLKWVKMKCIEMVKKMKKYYK+LMKDIMEAGAYGY DSYQHRLLLETSFAIP
Subjt:  MAGSYEDHQEELRRCGIQFKRRRRMAVARLGGKRSGRIVGWGRIVRKIRLKWVKMKCIEMVKKMKKYYKELMKDIMEAGAYGYPDSYQHRLLLETSFAIP

Query:  ILGVSLSTHSS-IHAATAATS
        ILGVSLSTHSS IHAA AA+S
Subjt:  ILGVSLSTHSS-IHAATAATS

A0A6J1D3L4 uncharacterized protein LOC1110169634.7e-2460Show/hide
Query:  MAGSYEDHQEELRRC----GIQFKRRRRMAVARLGGKRSGRIVG-WGRIVRKIRLKWVKMKCIEMVKKMKKYYKELMKDIMEA-GAYGYPDSYQHRLLLE
        M   YE       RC    GIQF+RRRRM VARLGG  SG   G  GR+VRKIR++WVK++C+ MVKKMKK+Y++++KD++EA  A  YP+SYQHR+LLE
Subjt:  MAGSYEDHQEELRRC----GIQFKRRRRMAVARLGGKRSGRIVG-WGRIVRKIRLKWVKMKCIEMVKKMKKYYKELMKDIMEA-GAYGYPDSYQHRLLLE

Query:  TSFAIPILGVSLSTH
        TSFAIPIL  SLST+
Subjt:  TSFAIPILGVSLSTH

A0A6J1GAR0 uncharacterized protein LOC1114523147.2e-3380Show/hide
Query:  RCGIQFKRRRRMAVARLGGKRSGRIVGWGRIVRKIRLKWVKMKCIEMVKKMKKYYKELMKDIMEAGAYGYPDSYQHRLLLETSFAIPILGVSLSTHSSIH
        R GIQF RRRRMAVARLGGKRSGR+V WGR +RKIRL+WVK+KCI MVKK+KKY   LMKD+MEAGAYG  DSYQHRLLLETSFAIPILGVS STHS+ H
Subjt:  RCGIQFKRRRRMAVARLGGKRSGRIVGWGRIVRKIRLKWVKMKCIEMVKKMKKYYKELMKDIMEAGAYGYPDSYQHRLLLETSFAIPILGVSLSTHSSIH

Query:  AATAA
        AA +A
Subjt:  AATAA

A0A6J1GVZ8 uncharacterized protein LOC1114580509.4e-3377.88Show/hide
Query:  RCGIQFKRRRRMAVARLGGKRSGRIVGWGRIVRKIRLKWVKMKCIEMVKKMKKYYKELMKDIMEAGAYGYPDSYQHRLLLETSFAIPILGVSLSTHSSIH
        R G++F RRRRM VARLGGKRSGR+V WGR++RKIRL+WVK+KCI MVKKMK+YY  LMKDI+EAGAY    SYQHRLLLETSFAIPILGVSLSTHSS+ 
Subjt:  RCGIQFKRRRRMAVARLGGKRSGRIVGWGRIVRKIRLKWVKMKCIEMVKKMKKYYKELMKDIMEAGAYGYPDSYQHRLLLETSFAIPILGVSLSTHSSIH

Query:  AATA
        AAT+
Subjt:  AATA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54120.1 unknown protein2.5e-0939.36Show/hide
Query:  RRRRMAVARLGGKRSGRIVG---WGRIVRKIRLKWVKMKCIEMVKKMKKYYKELMKDIMEAGAYGYPDSYQHRLLLE-TSFAIPILGVSLSTHS
        RRR+  V RLGGK S    G     ++VR+++L+W+K+  + +VKK+K +Y+ L+K+ ++AGA    ++ Q R+ +E  +FA+P LG+S S+ S
Subjt:  RRRRMAVARLGGKRSGRIVG---WGRIVRKIRLKWVKMKCIEMVKKMKKYYKELMKDIMEAGAYGYPDSYQHRLLLE-TSFAIPILGVSLSTHS

AT3G14060.1 unknown protein2.1e-0840Show/hide
Query:  FKRRRRMAVARLGGKRSGRIVGWG--RIVRKIRLKWVKMKCIEMVKKMKKYYKELMKDIMEAGAYGYPDSYQHRLLLET-SFAIPILGVS
        + RRR+  V RLGGK S     +   ++V ++RLKW+++  + +VKK+K YY+ ++K+  EAGA     + Q R+ +ET +FA P LG+S
Subjt:  FKRRRRMAVARLGGKRSGRIVGWG--RIVRKIRLKWVKMKCIEMVKKMKKYYKELMKDIMEAGAYGYPDSYQHRLLLET-SFAIPILGVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGAAGCTATGAGGATCATCAGGAAGAACTACGGCGCTGTGGGATTCAGTTTAAGAGGCGACGAAGAATGGCAGTGGCACGACTTGGGGGGAAGAGATCGGGACG
GATCGTGGGGTGGGGGAGGATAGTGAGGAAGATACGACTGAAATGGGTGAAGATGAAATGCATAGAGATGGTGAAGAAGATGAAAAAATACTACAAAGAGTTGATGAAGG
ATATAATGGAAGCAGGAGCTTATGGATATCCTGACTCATATCAACATAGGCTTCTTTTGGAGACTTCTTTTGCTATTCCAATTCTGGGTGTTTCTCTTTCTACTCATTCT
AGTATTCATGCTGCTACAGCTGCTACTTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGGAAGCTATGAGGATCATCAGGAAGAACTACGGCGCTGTGGGATTCAGTTTAAGAGGCGACGAAGAATGGCAGTGGCACGACTTGGGGGGAAGAGATCGGGACG
GATCGTGGGGTGGGGGAGGATAGTGAGGAAGATACGACTGAAATGGGTGAAGATGAAATGCATAGAGATGGTGAAGAAGATGAAAAAATACTACAAAGAGTTGATGAAGG
ATATAATGGAAGCAGGAGCTTATGGATATCCTGACTCATATCAACATAGGCTTCTTTTGGAGACTTCTTTTGCTATTCCAATTCTGGGTGTTTCTCTTTCTACTCATTCT
AGTATTCATGCTGCTACAGCTGCTACTTCATAA
Protein sequenceShow/hide protein sequence
MAGSYEDHQEELRRCGIQFKRRRRMAVARLGGKRSGRIVGWGRIVRKIRLKWVKMKCIEMVKKMKKYYKELMKDIMEAGAYGYPDSYQHRLLLETSFAIPILGVSLSTHS
SIHAATAATS