; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G28940 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G28940
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionleucine-rich repeat extensin-like protein 3
Genome locationChr3:26475195..26476793
RNA-Seq ExpressionCSPI03G28940
SyntenyCSPI03G28940
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650907.1 hypothetical protein Csa_002672, partial [Cucumis sativus]4.6e-4198.2Show/hide
Query:  PPPPPPPPITPPPPSPSPPPFSPPPPPPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQL
        P  PPPPPITPPPPSPSPPPFSPPPPPPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQL
Subjt:  PPPPPPPPITPPPPSPSPPPFSPPPPPPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQL

Query:  LRVKDRYEGFS
        LRVKDRYEGFS
Subjt:  LRVKDRYEGFS

XP_008463997.1 PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo]1.6e-5785.95Show/hide
Query:  MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLSPPRPSSPPPSPSPPPPPLPPPPPPPPPPPPPPLPPPPPPPPPPPPITPPPPSPSPPPFSPPPP
        MERPLTTLIFVI+GFAFSVLSLLVESQTPD ANPTLSPP PS PPPSPS               PPPPPLPPPPPPPPPPP I  PPPSPSPPPFSP PP
Subjt:  MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLSPPRPSSPPPSPSPPPPPLPPPPPPPPPPPPPPLPPPPPPPPPPPPITPPPPSPSPPPFSPPPP

Query:  PPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
        PPPHRHRR+PPPPLASS+ERKKKRPPVPPKNINTNQ SKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
Subjt:  PPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS

XP_011651738.2 LOW QUALITY PROTEIN: basic proline-rich protein [Cucumis sativus]1.7e-6491.35Show/hide
Query:  MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLSPPRPSSPPPSPSPPPPPLPPPPPPPPPPPPPPLPPPPPPPPPPPPITPPPPSPSPPPFSPPPP
        MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLSPPRPSSPPPSPS               PPPPPLPPPPPPP PPPPITPPPPSPSPPPFSPPPP
Subjt:  MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLSPPRPSSPPPSPSPPPPPLPPPPPPPPPPPPPPLPPPPPPPPPPPPITPPPPSPSPPPFSPPPP

Query:  PPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
        PPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
Subjt:  PPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS

XP_022948467.1 leucine-rich repeat extensin-like protein 3 [Cucurbita moschata]6.0e-2565.8Show/hide
Query:  MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLSPPRPSSPPPSPSPPPPPLPPPPPPPPPPPPPPLPPP--PPPPPPPPPITPPPP----SPSPPP
        MERP +TLIFVI+GFAFS+LSLLVESQ  DGA P+ SPP        P PPPP  PPP PPPPPPPPPPL PP  PPPP P P   PPPP    SP PP 
Subjt:  MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLSPPRPSSPPPSPSPPPPPLPPPPPPPPPPPPPPLPPP--PPPPPPPPPITPPPP----SPSPPP

Query:  FSPPPPPPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTN--QGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
        F PPP  P  +HR  PPPP   +     K+PP   +N N++  +GSKRSLN GKKVGLFFVGIAAVLQICVVGFLVFKRRQLLR KDRY+GFS
Subjt:  FSPPPPPPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTN--QGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS

XP_038900729.1 proline-rich receptor-like protein kinase PERK2 [Benincasa hispida]1.4e-4281.28Show/hide
Query:  MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLSPPRPSSPPPSPSPPPPPLPPPPPPPPPPPPPPLPPPPPPPPPPPPITPPPPSPSPPPFSPPPP
        MERPLTTLIFVI+GFAFSVLSLLVESQT DGANPTLSPP PS PPPSP PPPPPL P PPPPPPPPPPP+  PP          PPP SPSPPPFSPPPP
Subjt:  MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLSPPRPSSPPPSPSPPPPPLPPPPPPPPPPPPPPLPPPPPPPPPPPPITPPPPSPSPPPFSPPPP

Query:  -PPPHRHRRNPPPPLASSVERKKKRPPVPPKNI-NTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
         P P   RR PPP  AS  E  KK PPVPPKNI NTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
Subjt:  -PPPHRHRRNPPPPLASSVERKKKRPPVPPKNI-NTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS

TrEMBL top hitse value%identityAlignment
A0A0A0LC75 Uncharacterized protein9.9e-6691.89Show/hide
Query:  MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLSPPRPSSPPPSPSPPPPPLPPPPPPPPPPPPPPLPPPPPPPPPPPPITPPPPSPSPPPFSPPPP
        MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLSPPRPSSPPPSPS               PPPPPLPPPPPPPPPPPPITPPPPSPSPPPFSPPPP
Subjt:  MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLSPPRPSSPPPSPSPPPPPLPPPPPPPPPPPPPPLPPPPPPPPPPPPITPPPPSPSPPPFSPPPP

Query:  PPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
        PPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
Subjt:  PPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS

A0A1S3CKG6 leucine-rich repeat extensin-like protein 37.6e-5885.95Show/hide
Query:  MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLSPPRPSSPPPSPSPPPPPLPPPPPPPPPPPPPPLPPPPPPPPPPPPITPPPPSPSPPPFSPPPP
        MERPLTTLIFVI+GFAFSVLSLLVESQTPD ANPTLSPP PS PPPSPS               PPPPPLPPPPPPPPPPP I  PPPSPSPPPFSP PP
Subjt:  MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLSPPRPSSPPPSPSPPPPPLPPPPPPPPPPPPPPLPPPPPPPPPPPPITPPPPSPSPPPFSPPPP

Query:  PPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
        PPPHRHRR+PPPPLASS+ERKKKRPPVPPKNINTNQ SKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
Subjt:  PPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS

A0A5N6QK60 Uncharacterized protein7.4e-1356.92Show/hide
Query:  MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLSPPRPSSPPPSPSPPPPPLPPPPPPPPPP-PPPPLPPPPPPPPP--PPPITPPPPSPSPPPFSP
        ME PL TL+ +I GFA  +L+LL ESQ   G N        + PPPSP PPPPP PPPPPPPPPP PPPP PPPPPPP P  PPP +PPPP PSPP    
Subjt:  MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLSPPRPSSPPPSPSPPPPPLPPPPPPPPPP-PPPPLPPPPPPPPP--PPPITPPPPSPSPPPFSP

Query:  PPP----PPPHRHRRNPPPPLASS-------VERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRY
        PPP    PPP  H    PPP   S          +++ PP P         SK+ +N GKKVGLFFVGIAA+LQI VVGFLVFKRRQLL++KDRY
Subjt:  PPP----PPPHRHRRNPPPPLASS-------VERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRY

A0A6J1G9A4 leucine-rich repeat extensin-like protein 32.9e-2565.8Show/hide
Query:  MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLSPPRPSSPPPSPSPPPPPLPPPPPPPPPPPPPPLPPP--PPPPPPPPPITPPPP----SPSPPP
        MERP +TLIFVI+GFAFS+LSLLVESQ  DGA P+ SPP        P PPPP  PPP PPPPPPPPPPL PP  PPPP P P   PPPP    SP PP 
Subjt:  MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLSPPRPSSPPPSPSPPPPPLPPPPPPPPPPPPPPLPPP--PPPPPPPPPITPPPP----SPSPPP

Query:  FSPPPPPPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTN--QGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
        F PPP  P  +HR  PPPP   +     K+PP   +N N++  +GSKRSLN GKKVGLFFVGIAAVLQICVVGFLVFKRRQLLR KDRY+GFS
Subjt:  FSPPPPPPPHRHRRNPPPPLASSVERKKKRPPVPPKNINTN--QGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS

A0A6J1KAI1 leucine-rich repeat extensin-like protein 31.0e-2266.17Show/hide
Query:  MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLS--PPRPSSPPPSPSPPPPPLPPPPPPP--PPPPPPPLPPPPPPPP-----PPPPITPPPPSP-
        MERPL+T IFVI+GFAFS+LSLLVESQ  DGA  + S  PP PS PPPSP PPPPPL PP  PP  PP  PP  PP  PPPP     PPPPI  PPP P 
Subjt:  MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLS--PPRPSSPPPSPSPPPPPLPPPPPPP--PPPPPPPLPPPPPPPP-----PPPPITPPPPSP-

Query:  ---SPPPFSPPPPPPPH-RHRRNP-PPPLASSVERKKKRPPVPPKNINTN-QGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGF
           SPPP  PPPP PP  +HR  P PPP+ +S +  KK P V   N + N +GSKRSLN GKKVGLFFVGIAAVLQICVVGFLVFKRRQLLR KD+Y+GF
Subjt:  ---SPPPFSPPPPPPPH-RHRRNP-PPPLASSVERKKKRPPVPPKNINTN-QGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGF

Query:  S
        S
Subjt:  S

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACGGCCATTGACCACATTGATCTTCGTGATTACGGGGTTTGCTTTCAGTGTTTTGTCGCTTCTTGTCGAGTCTCAGACTCCAGATGGAGCCAATCCCACTCTCTC
GCCGCCGAGACCTTCTTCACCGCCTCCCTCTCCCTCTCCGCCACCACCGCCGTTGCCACCACCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCGTTGCCACCACCTC
CCCCACCACCCCCGCCTCCGCCTCCAATCACCCCACCGCCTCCATCGCCATCTCCTCCCCCATTTTCCCCACCGCCTCCTCCTCCGCCGCATCGCCATCGTCGTAATCCA
CCGCCTCCTCTTGCATCCTCCGTGGAGAGAAAGAAAAAACGACCACCAGTCCCTCCGAAAAACATCAATACTAATCAAGGGTCGAAGCGAAGTCTCAACAAGGGGAAGAA
AGTTGGGCTGTTCTTTGTAGGTATTGCCGCAGTCCTCCAAATCTGTGTGGTGGGTTTTTTGGTATTCAAGAGACGGCAGCTTCTAAGAGTCAAGGATCGATATGAAGGCT
TTTCATGA
mRNA sequenceShow/hide mRNA sequence
AATTTTGAAAATTTCTTCTTCTTCTTATTATATCTTACAACAAAGCTCAGATCATCACTGTGACTCAGTCAATCTCACATTTGACTCAGTTTCCTCATCCTTCTTCTTCT
CTTTCTTTCTCAGCCATCAATTTCCACCCCCTCCATTTCCTCCTCCTTCTTATGCTCTTCTTTTTCCCCTTCACCAAACCCTCACATTGAGGAAGCCCCAGATTCCGAGG
CCATCCCAATGTCCTCTGCAGATTTCTTCTTCTTTTTTCATTTCTAATCTCTTCTTCTGCGGATTTTGATTTTGGGTTCTTTTTCTTCTCTTCCTTTTGTGGATGCGGAA
TTTGGGGCACATTATACTCGGGGTTTCTTTTTCCTTTTCTTCTTTTTTTGAGTTTTCTCAAACCCTAGCGTTTTCAATCTGGTTCTGAATCTTCGTGGGTGTTGACGATT
TCTATTTGGATTTTGAGGCTTCGAAAGGGGAATTTGAGCCTTTGGGAACCGACCCTTTTGGGAGAAACGTCGGCTATTGTTTCATTTCAATCACAGGGTTGGGTTGTTCC
CTGTTTTGGTTAAAGCCCAGATGCGAGGAAGGTCCGGGGATTTTGAAAGTGAATCCTGATTTTCTTTGATTACTGTTTTTTTTCAATGCAATGGAACGGCCATTGACCAC
ATTGATCTTCGTGATTACGGGGTTTGCTTTCAGTGTTTTGTCGCTTCTTGTCGAGTCTCAGACTCCAGATGGAGCCAATCCCACTCTCTCGCCGCCGAGACCTTCTTCAC
CGCCTCCCTCTCCCTCTCCGCCACCACCGCCGTTGCCACCACCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCGTTGCCACCACCTCCCCCACCACCCCCGCCTCCG
CCTCCAATCACCCCACCGCCTCCATCGCCATCTCCTCCCCCATTTTCCCCACCGCCTCCTCCTCCGCCGCATCGCCATCGTCGTAATCCACCGCCTCCTCTTGCATCCTC
CGTGGAGAGAAAGAAAAAACGACCACCAGTCCCTCCGAAAAACATCAATACTAATCAAGGGTCGAAGCGAAGTCTCAACAAGGGGAAGAAAGTTGGGCTGTTCTTTGTAG
GTATTGCCGCAGTCCTCCAAATCTGTGTGGTGGGTTTTTTGGTATTCAAGAGACGGCAGCTTCTAAGAGTCAAGGATCGATATGAAGGCTTTTCATGAAGCCGTTGGCAT
CTGTTTCCTTCTTCTTACAACAGAGCCGAGGACTGTAGAAGAATTCTTGAGGATATGGCGGCCATTGAGCTAACTGGCTTGTGTCGCCTGCTCCAGAAAAAGCCAACAAT
TTGGGTAAATTTTCGATTGTTGGATTGGGAGATTGACAAAGCTTGTTCTTGAGATTATAAGAGGCTGCTCATCAGGTGATAAACTGAACAGGCAGCAGGCGGATAGGAAG
GACGAACATTCTTCTCTAGGGCTTTCCTCAGGTGTTGTGTAAAAACGGGTACATGATATTTGATTGAGCTTTTTCTCCTTGTGATTTTTGAATTCTTGTTCATTCTTTTG
TCCAATTCTGATTATACAGTTTATTAATTCAAACCAGAAGAAATCGTCTTAAAATATCC
Protein sequenceShow/hide protein sequence
MERPLTTLIFVITGFAFSVLSLLVESQTPDGANPTLSPPRPSSPPPSPSPPPPPLPPPPPPPPPPPPPPLPPPPPPPPPPPPITPPPPSPSPPPFSPPPPPPPHRHRRNP
PPPLASSVERKKKRPPVPPKNINTNQGSKRSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS