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CSPI03G29200 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G29200
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr3:26806900..26807592
RNA-Seq ExpressionCSPI03G29200
SyntenyCSPI03G29200
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581317.1 hypothetical protein SDJN03_21319, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2453.47Show/hide
Query:  MDISGKRKRNDNNQNEED--EIQKFSEIVEKFRAPYNWFRARMSTHSAAATHNGGDRKKKKKKPSGSGEDEDADDDDVWMPCFLLQDFEEEEVIKSWKAR
        M+ISGKRKR ++++ + D  EI+KFSEIV+ FRAPYNWFRA++ T S + T NG D  K  K       D +   D VWMPCFL++DFEE+EVIKSWKAR
Subjt:  MDISGKRKRNDNNQNEED--EIQKFSEIVEKFRAPYNWFRARMSTHSAAATHNGGDRKKKKKKPSGSGEDEDADDDDVWMPCFLLQDFEEEEVIKSWKAR

Query:  AVPRPETAGP-----AAEFESVDGGRVEGEKGKKEEKLNLRLSL
        A+P+ +TA P     AA FE++DGG  E +K    ++L+LRLSL
Subjt:  AVPRPETAGP-----AAEFESVDGGRVEGEKGKKEEKLNLRLSL

KAG6606917.1 hypothetical protein SDJN03_00259, partial [Cucurbita argyrosperma subsp. sororia]4.2e-2353.19Show/hide
Query:  MDISGKRKR--NDNNQNEEDE--IQKFSEIVEKFRAPYNWFRARMSTHSAAATHNGGDRKKKKKKPSGSGEDEDADDDDVWMPCFLLQDFEEEEVIKSWK
        M+ SGKRKR  ND N+NE DE  ++KF EIVEKFRAPY+WFRA+MS     +  NG D++ KKKK     ED D+   DVWMP FLL+DFEEEEVIK WK
Subjt:  MDISGKRKR--NDNNQNEEDE--IQKFSEIVEKFRAPYNWFRARMSTHSAAATHNGGDRKKKKKKPSGSGEDEDADDDDVWMPCFLLQDFEEEEVIKSWK

Query:  ARAVPRPETAGPAAEFESVDGGRVEGEKGKKEEKLNLRLSL
        + A+ + ET   A    ++DGG    E+ +  E L+LRL L
Subjt:  ARAVPRPETAGPAAEFESVDGGRVEGEKGKKEEKLNLRLSL

KGN58537.1 hypothetical protein Csa_002705 [Cucumis sativus]8.6e-6999.27Show/hide
Query:  MDISGKRKRNDNNQNEEDEIQKFSEIVEKFRAPYNWFRARMSTHSAAATHNGGDRKKKKKKPSGSGEDEDADDDDVWMPCFLLQDFEEEEVIKSWKARAV
        MDISGKRKRNDNNQNEEDEIQKFSEIVEKFRAPYNWFRARMSTHSAAATHNGGDRKKKKKKPSGSGEDED DDDDVWMPCFLLQDFEEEEVIKSWKARAV
Subjt:  MDISGKRKRNDNNQNEEDEIQKFSEIVEKFRAPYNWFRARMSTHSAAATHNGGDRKKKKKKPSGSGEDEDADDDDVWMPCFLLQDFEEEEVIKSWKARAV

Query:  PRPETAGPAAEFESVDGGRVEGEKGKKEEKLNLRLSL
        PRPETAGPAAEFESVDGGRVEGEKGKKEEKLNLRLSL
Subjt:  PRPETAGPAAEFESVDGGRVEGEKGKKEEKLNLRLSL

TrEMBL top hitse value%identityAlignment
A0A0A0LCY6 Uncharacterized protein4.2e-6999.27Show/hide
Query:  MDISGKRKRNDNNQNEEDEIQKFSEIVEKFRAPYNWFRARMSTHSAAATHNGGDRKKKKKKPSGSGEDEDADDDDVWMPCFLLQDFEEEEVIKSWKARAV
        MDISGKRKRNDNNQNEEDEIQKFSEIVEKFRAPYNWFRARMSTHSAAATHNGGDRKKKKKKPSGSGEDED DDDDVWMPCFLLQDFEEEEVIKSWKARAV
Subjt:  MDISGKRKRNDNNQNEEDEIQKFSEIVEKFRAPYNWFRARMSTHSAAATHNGGDRKKKKKKPSGSGEDEDADDDDVWMPCFLLQDFEEEEVIKSWKARAV

Query:  PRPETAGPAAEFESVDGGRVEGEKGKKEEKLNLRLSL
        PRPETAGPAAEFESVDGGRVEGEKGKKEEKLNLRLSL
Subjt:  PRPETAGPAAEFESVDGGRVEGEKGKKEEKLNLRLSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACATTTCAGGGAAGAGGAAGAGGAACGACAATAATCAAAACGAGGAAGATGAAATCCAGAAATTCAGCGAAATCGTCGAGAAATTTCGCGCTCCTTACAACTGGTT
TAGGGCTCGAATGTCCACTCATTCCGCTGCTGCAACCCATAATGGCGGCGATCGGAAGAAGAAGAAGAAGAAGCCCAGCGGAAGCGGGGAGGACGAGGATGCTGATGATG
ATGATGTTTGGATGCCCTGTTTTCTTCTGCAGGATTTCGAGGAAGAGGAGGTTATTAAGTCGTGGAAAGCTAGGGCGGTCCCGAGGCCAGAGACGGCAGGTCCGGCAGCG
GAATTTGAAAGCGTCGACGGAGGAAGGGTGGAGGGCGAGAAGGGCAAAAAGGAGGAAAAGTTAAACCTCCGGCTTTCTCTTTAG
mRNA sequenceShow/hide mRNA sequence
GTGTGATAGAGTTGGGGTCAATACGTATGGAAGCACCCACAGAGATTTCAAGGAAGCAATCCGCAAAATTTCCATTTCCTTTTCACTTCCATATATTCTAAATATTTCCT
AAATCACAGAAAATGGACATTTCAGGGAAGAGGAAGAGGAACGACAATAATCAAAACGAGGAAGATGAAATCCAGAAATTCAGCGAAATCGTCGAGAAATTTCGCGCTCC
TTACAACTGGTTTAGGGCTCGAATGTCCACTCATTCCGCTGCTGCAACCCATAATGGCGGCGATCGGAAGAAGAAGAAGAAGAAGCCCAGCGGAAGCGGGGAGGACGAGG
ATGCTGATGATGATGATGTTTGGATGCCCTGTTTTCTTCTGCAGGATTTCGAGGAAGAGGAGGTTATTAAGTCGTGGAAAGCTAGGGCGGTCCCGAGGCCAGAGACGGCA
GGTCCGGCAGCGGAATTTGAAAGCGTCGACGGAGGAAGGGTGGAGGGCGAGAAGGGCAAAAAGGAGGAAAAGTTAAACCTCCGGCTTTCTCTTTAGTTTTATTTATGGTA
TCTTTTCTGGAAAGGTGAAATTAATATATATAATATATATATTCAAATGCAAAACACATGAATGTTAATTACAAAATATTATTAAAATTAAGTAGTAAATATGGCATCTG
CTTGCTTCTTTATTTTATTTTCTTTTCTTTTAC
Protein sequenceShow/hide protein sequence
MDISGKRKRNDNNQNEEDEIQKFSEIVEKFRAPYNWFRARMSTHSAAATHNGGDRKKKKKKPSGSGEDEDADDDDVWMPCFLLQDFEEEEVIKSWKARAVPRPETAGPAA
EFESVDGGRVEGEKGKKEEKLNLRLSL