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CSPI03G29260 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G29260
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDihydroorotate dehydrogenase, putative
Genome locationChr3:26860963..26863146
RNA-Seq ExpressionCSPI03G29260
SyntenyCSPI03G29260
Gene Ontology termsNA
InterPro domainsIPR009297 - Protein of unknown function DUF952


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606920.1 hypothetical protein SDJN03_00262, partial [Cucurbita argyrosperma subsp. sororia]2.3e-5075.37Show/hide
Query:  MADQNEEQNSAP--TQEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHF
        MA ++E+  SAP   +EFVYRIS SKEW+ S  +G++ GG  D SSGFIHLSNL+QVQSTLQNFFLN K+ELYLLQIEAKKLGDGL+YELVDG NSFPHF
Subjt:  MADQNEEQNSAP--TQEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHF

Query:  YGPSRSFSPIPMDAVTNSDKITFSDGRFACSLLE
        YGPSRSFSPIP+DAVT ++K+TFSDGRFACS LE
Subjt:  YGPSRSFSPIPMDAVTNSDKITFSDGRFACSLLE

XP_004150836.1 uncharacterized protein LOC101207691 [Cucumis sativus]5.7e-7099.24Show/hide
Query:  MADQNEEQNSAPTQEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHFYG
        MADQNEEQNSAPT+EFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHFYG
Subjt:  MADQNEEQNSAPTQEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHFYG

Query:  PSRSFSPIPMDAVTNSDKITFSDGRFACSLLE
        PSRSFSPIPMDAVTNSDKITFSDGRFACSLLE
Subjt:  PSRSFSPIPMDAVTNSDKITFSDGRFACSLLE

XP_008447457.1 PREDICTED: uncharacterized protein LOC103489901 [Cucumis melo]2.0e-6290.15Show/hide
Query:  MADQNEEQNSAPTQEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHFYG
        MADQNE++NSA T+EFVYRISTSKEWDES RLGHI GGHLDKSSGFIHLSNL+QVQSTLQNFFLN+KD+LYLLQIEAKKLGDGLIYELVDG NSFPHFYG
Subjt:  MADQNEEQNSAPTQEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHFYG

Query:  PSRSFSPIPMDAVTNSDKITFSDGRFACSLLE
        PSRSFSPIPMDAVT +DKITFSDGRF+CSLLE
Subjt:  PSRSFSPIPMDAVTNSDKITFSDGRFACSLLE

XP_022948943.1 uncharacterized protein LOC111452443 [Cucurbita moschata]1.0e-5075.37Show/hide
Query:  MADQNEEQNSAP--TQEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHF
        MA ++E++ SAP   +EFVYRIS SKEW+ S  +G++ GG  D SSGFIHLSNL+QVQSTLQNFFLN K+ELYLLQIEAKKLGDGL+YELVDG NSFPHF
Subjt:  MADQNEEQNSAP--TQEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHF

Query:  YGPSRSFSPIPMDAVTNSDKITFSDGRFACSLLE
        YGPSRSFSPIP+DAVT ++K+TFSDGRFACS LE
Subjt:  YGPSRSFSPIPMDAVTNSDKITFSDGRFACSLLE

XP_038905017.1 uncharacterized protein LOC120091189 [Benincasa hispida]8.6e-5884.85Show/hide
Query:  MADQNEEQNSAPTQEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHFYG
        MA QNEE+ SA T++FVYRISTSKEWDES R+GHI GG  DKSSGFIHLSNL+QVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDG NSFPHFYG
Subjt:  MADQNEEQNSAPTQEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHFYG

Query:  PSRSFSPIPMDAVTNSDKITFSDGRFACSLLE
        PSRSF PIPMDAVT ++K+TFSDGRF CS LE
Subjt:  PSRSFSPIPMDAVTNSDKITFSDGRFACSLLE

TrEMBL top hitse value%identityAlignment
A0A0A0LER0 Uncharacterized protein2.8e-7099.24Show/hide
Query:  MADQNEEQNSAPTQEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHFYG
        MADQNEEQNSAPT+EFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHFYG
Subjt:  MADQNEEQNSAPTQEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHFYG

Query:  PSRSFSPIPMDAVTNSDKITFSDGRFACSLLE
        PSRSFSPIPMDAVTNSDKITFSDGRFACSLLE
Subjt:  PSRSFSPIPMDAVTNSDKITFSDGRFACSLLE

A0A1S3BHG9 uncharacterized protein LOC1034899019.6e-6390.15Show/hide
Query:  MADQNEEQNSAPTQEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHFYG
        MADQNE++NSA T+EFVYRISTSKEWDES RLGHI GGHLDKSSGFIHLSNL+QVQSTLQNFFLN+KD+LYLLQIEAKKLGDGLIYELVDG NSFPHFYG
Subjt:  MADQNEEQNSAPTQEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHFYG

Query:  PSRSFSPIPMDAVTNSDKITFSDGRFACSLLE
        PSRSFSPIPMDAVT +DKITFSDGRF+CSLLE
Subjt:  PSRSFSPIPMDAVTNSDKITFSDGRFACSLLE

A0A5D3DA97 Uncharacterized protein9.6e-6390.15Show/hide
Query:  MADQNEEQNSAPTQEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHFYG
        MADQNE++NSA T+EFVYRISTSKEWDES RLGHI GGHLDKSSGFIHLSNL+QVQSTLQNFFLN+KD+LYLLQIEAKKLGDGLIYELVDG NSFPHFYG
Subjt:  MADQNEEQNSAPTQEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHFYG

Query:  PSRSFSPIPMDAVTNSDKITFSDGRFACSLLE
        PSRSFSPIPMDAVT +DKITFSDGRF+CSLLE
Subjt:  PSRSFSPIPMDAVTNSDKITFSDGRFACSLLE

A0A6J1GAQ2 uncharacterized protein LOC1114524434.9e-5175.37Show/hide
Query:  MADQNEEQNSAP--TQEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHF
        MA ++E++ SAP   +EFVYRIS SKEW+ S  +G++ GG  D SSGFIHLSNL+QVQSTLQNFFLN K+ELYLLQIEAKKLGDGL+YELVDG NSFPHF
Subjt:  MADQNEEQNSAP--TQEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHF

Query:  YGPSRSFSPIPMDAVTNSDKITFSDGRFACSLLE
        YGPSRSFSPIP+DAVT ++K+TFSDGRFACS LE
Subjt:  YGPSRSFSPIPMDAVTNSDKITFSDGRFACSLLE

A0A6J1K865 uncharacterized protein LOC1114931161.4e-5075.37Show/hide
Query:  MADQNEEQNSAP--TQEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHF
        MA Q+E+  SAP   +EFVYRIS SKEW+ S  +G++ GG  D SSGFIHLSNL+QVQSTLQNFFLN K+ELYLLQIEAKKLGDGL+YELVDG NSFPHF
Subjt:  MADQNEEQNSAP--TQEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHF

Query:  YGPSRSFSPIPMDAVTNSDKITFSDGRFACSLLE
        YGPSRSFSPIP+DAVT ++K+TFSDG+FACS LE
Subjt:  YGPSRSFSPIPMDAVTNSDKITFSDGRFACSLLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G01897.1 unknown protein9.5e-3957.63Show/hide
Query:  QEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHFYGPSRSFSPIPMDAV
        +EF+YRIST +EW+E  + G   G  +DKS+ + HLS LDQVQ TL+NFF+++K+ LYLLQ++ KKLGDGLIYE VD  NSFPHFYGP ++F P+P+D+V
Subjt:  QEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHFYGPSRSFSPIPMDAV

Query:  TNSDKITFSDGRFACSLL
          ++K+TF +G F CS L
Subjt:  TNSDKITFSDGRFACSLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGACCAGAATGAGGAACAAAATTCTGCACCTACCCAAGAGTTTGTTTACAGAATCAGTACCTCCAAGGAGTGGGATGAATCACACCGCCTTGGTCATATCTGTGG
AGGACACCTCGACAAATCTTCCGGTTTCATTCATCTCAGTAACCTCGATCAGGTCCAGTCAACTTTGCAGAATTTCTTCCTGAATATCAAAGATGAATTGTATCTCCTTC
AAATTGAGGCCAAAAAGCTTGGTGATGGATTGATTTATGAACTTGTTGATGGTTGCAATAGCTTTCCTCATTTCTATGGCCCGTCACGAAGCTTCAGCCCTATCCCTATG
GATGCAGTAACAAATTCAGATAAAATAACTTTTTCTGATGGTCGATTTGCATGTAGTTTACTCGAATAG
mRNA sequenceShow/hide mRNA sequence
GAGGATTATAAATTGTTGTTGAGTAACACCCTTACATCTTAGAAGAAATAGAGAAAAACTATTACAATTTACAACGATGATCCTATAAACGTGTGTGTAGATAAAAGGAA
AAGAAATTGGAGTTATTTATGTGGTCATTTCATATCCCCAATCATCTCTACCTATCGAAACCTGATTCCGGTGACTCATTGAATCACAAACTTAGAAATGGCAGACCAGA
ATGAGGAACAAAATTCTGCACCTACCCAAGAGTTTGTTTACAGAATCAGTACCTCCAAGGAGTGGGATGAATCACACCGCCTTGGTCATATCTGTGGAGGACACCTCGAC
AAATCTTCCGGTTTCATTCATCTCAGTAACCTCGATCAGGTCCAGTCAACTTTGCAGAATTTCTTCCTGAATATCAAAGATGAATTGTATCTCCTTCAAATTGAGGCCAA
AAAGCTTGGTGATGGATTGATTTATGAACTTGTTGATGGTTGCAATAGCTTTCCTCATTTCTATGGCCCGTCACGAAGCTTCAGCCCTATCCCTATGGATGCAGTAACAA
ATTCAGATAAAATAACTTTTTCTGATGGTCGATTTGCATGTAGTTTACTCGAATAGGAATAGCTTTTAGTTGGCAATCCAACTTTGAATTGTATCAACAAACTAATTGCT
GCTCAATGTTATAGGCTGCAGAAGCCAAGCACTTGTAGTTCTGCAGCCTTTTTCCTTTTCTAATTTGTAAAGTACATCGGAGTCTTAAATTCATGTGAGCTTTTGGGTAG
TTATCGGCTTTATCTGAGTCGTCCTATTACCAATCCAAGAGCCACACTGCATAAACCGTTGTTAATGCCTTCATTTATCAGGCAAAAATGGGAATAATACCGATTACTTT
CAATTGTGGAGAATATTATATATCAAAATATTGTGTGGAGATATTATTTTCCC
Protein sequenceShow/hide protein sequence
MADQNEEQNSAPTQEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHFYGPSRSFSPIPM
DAVTNSDKITFSDGRFACSLLE