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CSPI03G29310 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G29310
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRING finger protein 165-like protein
Genome locationChr3:26894682..26895085
RNA-Seq ExpressionCSPI03G29310
SyntenyCSPI03G29310
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052771.1 RING finger protein 165-like protein [Cucumis melo var. makuwa]7.4e-0445.83Show/hide
Query:  ELPYNILHLIRR--RVMGEETVILEEDPARRRAQEKAIERLTISEKDDGLFEGEELGDCCICCEELNGGEKK
        E+ + I+ LI R   +  EET       +R  ++  AIERL + EK DG  EG ELGDCC+C EEL G EK+
Subjt:  ELPYNILHLIRR--RVMGEETVILEEDPARRRAQEKAIERLTISEKDDGLFEGEELGDCCICCEELNGGEKK

KAA0052772.1 RING finger protein 165-like protein [Cucumis melo var. makuwa]7.9e-1451.79Show/hide
Query:  MSSSIRFTLRRHNVRHDQSLQNRNPSR----LPLPSDE-LPYNILHLIRRRVMGEETVILEEDPARRRAQEKAIERLTISEKDDGLFEGEELGDCCICCE
        MS+ IRFT RRH  RHD+SLQNR+  R     PLP +E LPY+++H  RRRV+ +E VI EEDPA              SE+ DG  E E  GDCCIC E
Subjt:  MSSSIRFTLRRHNVRHDQSLQNRNPSR----LPLPSDE-LPYNILHLIRRRVMGEETVILEEDPARRRAQEKAIERLTISEKDDGLFEGEELGDCCICCE

Query:  ELN--GGEKKKK
        ELN    EK KK
Subjt:  ELN--GGEKKKK

XP_031738983.1 E3 ubiquitin-protein ligase RNF181 homolog [Cucumis sativus]1.1e-50100Show/hide
Query:  MSSSIRFTLRRHNVRHDQSLQNRNPSRLPLPSDELPYNILHLIRRRVMGEETVILEEDPARRRAQEKAIERLTISEKDDGLFEGEELGDCCICCEELNGG
        MSSSIRFTLRRHNVRHDQSLQNRNPSRLPLPSDELPYNILHLIRRRVMGEETVILEEDPARRRAQEKAIERLTISEKDDGLFEGEELGDCCICCEELNGG
Subjt:  MSSSIRFTLRRHNVRHDQSLQNRNPSRLPLPSDELPYNILHLIRRRVMGEETVILEEDPARRRAQEKAIERLTISEKDDGLFEGEELGDCCICCEELNGG

Query:  EKKK
        EKKK
Subjt:  EKKK

XP_038876865.1 putative RING-H2 finger protein ATL53 [Benincasa hispida]7.4e-0446.67Show/hide
Query:  RRRVMGEETVILEEDPARRRAQEKAIERLTISEKDDGLFEGEELGDCCICCEELNGGEKK
        RR ++ EE  +LEE PARRRA E+  +RL + + D+   +  E+GDCC+C EELN   K+
Subjt:  RRRVMGEETVILEEDPARRRAQEKAIERLTISEKDDGLFEGEELGDCCICCEELNGGEKK

XP_038905732.1 E3 ubiquitin-protein ligase arkadia-A-like [Benincasa hispida]2.6e-0966.67Show/hide
Query:  RRRVMGEETVILEEDPARRRAQEKAIERLTISEKDDGLFEGEELGDCCICCEELNGGEKK
        RR V+ EETVILEE P RR A + AIERL   EK DG F GEELGDCC+CCEEL  G+K+
Subjt:  RRRVMGEETVILEEDPARRRAQEKAIERLTISEKDDGLFEGEELGDCCICCEELNGGEKK

TrEMBL top hitse value%identityAlignment
A0A0A0LER3 Uncharacterized protein1.3e-51100Show/hide
Query:  MSSSIRFTLRRHNVRHDQSLQNRNPSRLPLPSDELPYNILHLIRRRVMGEETVILEEDPARRRAQEKAIERLTISEKDDGLFEGEELGDCCICCEELNGG
        MSSSIRFTLRRHNVRHDQSLQNRNPSRLPLPSDELPYNILHLIRRRVMGEETVILEEDPARRRAQEKAIERLTISEKDDGLFEGEELGDCCICCEELNGG
Subjt:  MSSSIRFTLRRHNVRHDQSLQNRNPSRLPLPSDELPYNILHLIRRRVMGEETVILEEDPARRRAQEKAIERLTISEKDDGLFEGEELGDCCICCEELNGG

Query:  EKKKK
        EKKKK
Subjt:  EKKKK

A0A5A7UAN0 RING finger protein 165-like protein3.8e-1451.79Show/hide
Query:  MSSSIRFTLRRHNVRHDQSLQNRNPSR----LPLPSDE-LPYNILHLIRRRVMGEETVILEEDPARRRAQEKAIERLTISEKDDGLFEGEELGDCCICCE
        MS+ IRFT RRH  RHD+SLQNR+  R     PLP +E LPY+++H  RRRV+ +E VI EEDPA              SE+ DG  E E  GDCCIC E
Subjt:  MSSSIRFTLRRHNVRHDQSLQNRNPSR----LPLPSDE-LPYNILHLIRRRVMGEETVILEEDPARRRAQEKAIERLTISEKDDGLFEGEELGDCCICCE

Query:  ELN--GGEKKKK
        ELN    EK KK
Subjt:  ELN--GGEKKKK

A0A5D3BYE9 RING finger protein 165-like protein3.6e-0445.83Show/hide
Query:  ELPYNILHLIRR--RVMGEETVILEEDPARRRAQEKAIERLTISEKDDGLFEGEELGDCCICCEELNGGEKK
        E+ + I+ LI R   +  EET       +R  ++  AIERL + EK DG  EG ELGDCC+C EEL G EK+
Subjt:  ELPYNILHLIRR--RVMGEETVILEEDPARRRAQEKAIERLTISEKDDGLFEGEELGDCCICCEELNGGEKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCTCCATACGCTTCACTCTCCGCCGCCACAACGTCAGGCACGATCAATCTCTCCAAAACCGAAACCCATCCAGGCTTCCACTTCCATCCGACGAACTTCCGTA
CAATATCCTCCATCTAATTAGGCGCCGTGTTATGGGGGAGGAAACGGTGATTCTGGAAGAAGATCCGGCGAGGAGAAGGGCGCAGGAGAAGGCGATTGAGAGGTTGACGA
TCAGCGAGAAAGATGATGGGTTGTTTGAGGGAGAAGAGTTGGGAGATTGTTGTATTTGTTGCGAAGAACTGAATGGAGGGGAGAAGAAGAAGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCCTCCATACGCTTCACTCTCCGCCGCCACAACGTCAGGCACGATCAATCTCTCCAAAACCGAAACCCATCCAGGCTTCCACTTCCATCCGACGAACTTCCGTA
CAATATCCTCCATCTAATTAGGCGCCGTGTTATGGGGGAGGAAACGGTGATTCTGGAAGAAGATCCGGCGAGGAGAAGGGCGCAGGAGAAGGCGATTGAGAGGTTGACGA
TCAGCGAGAAAGATGATGGGTTGTTTGAGGGAGAAGAGTTGGGAGATTGTTGTATTTGTTGCGAAGAACTGAATGGAGGGGAGAAGAAGAAGAAGTAA
Protein sequenceShow/hide protein sequence
MSSSIRFTLRRHNVRHDQSLQNRNPSRLPLPSDELPYNILHLIRRRVMGEETVILEEDPARRRAQEKAIERLTISEKDDGLFEGEELGDCCICCEELNGGEKKKK