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CSPI03G29740 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G29740
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionArabinogalactan peptide 23
Genome locationChr3:27285326..27285508
RNA-Seq ExpressionCSPI03G29740
SyntenyCSPI03G29740
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044702 - Arabinogalactan protein 23/40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048336.1 Arabinogalactan peptide 23 [Cucumis melo var. makuwa]2.2e-1688.33Show/hide
Query:  MEMKKIACAVLFAAATVTAVVAADEALAPAPGPSSGAGIGVPAIGSLVGASLLSFAAYYL
        MEMKKIACA+LFAAATV+A VA D+ALAPAPGPSSGA IG+PAIGSLVGASLLSFAAYYL
Subjt:  MEMKKIACAVLFAAATVTAVVAADEALAPAPGPSSGAGIGVPAIGSLVGASLLSFAAYYL
KAG7018086.1 hypothetical protein SDJN02_19952, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-1486.21Show/hide
Query:  MKKIACAVLFAAATVTAVVAADEALAPAPGPSSGAGIGVPAIGSLVGASLLSFAAYYL
        MKKIACAVLFAAATV+AVVA DEALAPAPGPSSGA  G+PAIGS++GASLLS AAYYL
Subjt:  MKKIACAVLFAAATVTAVVAADEALAPAPGPSSGAGIGVPAIGSLVGASLLSFAAYYL
KGN58598.1 hypothetical protein Csa_001979 [Cucumis sativus]1.6e-19100Show/hide
Query:  MEMKKIACAVLFAAATVTAVVAADEALAPAPGPSSGAGIGVPAIGSLVGASLLSFAAYYL
        MEMKKIACAVLFAAATVTAVVAADEALAPAPGPSSGAGIGVPAIGSLVGASLLSFAAYYL
Subjt:  MEMKKIACAVLFAAATVTAVVAADEALAPAPGPSSGAGIGVPAIGSLVGASLLSFAAYYL
XP_022983304.1 arabinogalactan peptide 23-like [Cucurbita maxima]3.2e-1586.67Show/hide
Query:  MEMKKIACAVLFAAATVTAVVAADEALAPAPGPSSGAGIGVPAIGSLVGASLLSFAAYYL
        MEMKKIACAVLFAAATV+AVVA DEALAPAPGPSSGA  G+PAIGS +GASLLS AAYYL
Subjt:  MEMKKIACAVLFAAATVTAVVAADEALAPAPGPSSGAGIGVPAIGSLVGASLLSFAAYYL
XP_038905644.1 arabinogalactan protein 23-like [Benincasa hispida]1.4e-1586.67Show/hide
Query:  MEMKKIACAVLFAAATVTAVVAADEALAPAPGPSSGAGIGVPAIGSLVGASLLSFAAYYL
        MEMKKIACAVLFAAATV+A VA DEALAPAPGPSSGA IG+PAIGS++GASLLS AAYYL
Subjt:  MEMKKIACAVLFAAATVTAVVAADEALAPAPGPSSGAGIGVPAIGSLVGASLLSFAAYYL
TrEMBL top hitse value%identityAlignment
A0A0A0L9U8 Uncharacterized protein7.8e-20100Show/hide
Query:  MEMKKIACAVLFAAATVTAVVAADEALAPAPGPSSGAGIGVPAIGSLVGASLLSFAAYYL
        MEMKKIACAVLFAAATVTAVVAADEALAPAPGPSSGAGIGVPAIGSLVGASLLSFAAYYL
Subjt:  MEMKKIACAVLFAAATVTAVVAADEALAPAPGPSSGAGIGVPAIGSLVGASLLSFAAYYL
A0A5A7U280 Arabinogalactan peptide 231.1e-1688.33Show/hide
Query:  MEMKKIACAVLFAAATVTAVVAADEALAPAPGPSSGAGIGVPAIGSLVGASLLSFAAYYL
        MEMKKIACA+LFAAATV+A VA D+ALAPAPGPSSGA IG+PAIGSLVGASLLSFAAYYL
Subjt:  MEMKKIACAVLFAAATVTAVVAADEALAPAPGPSSGAGIGVPAIGSLVGASLLSFAAYYL
A0A6J1HQG2 arabinogalactan peptide 23-like1.1e-1380Show/hide
Query:  MEMKKIACAVLFAAATVTAVVAADEALAPAPGPSSGAGIGVPAIGSLVGASLLSFAAYYL
        MEMKKI CAVLFAAATVTA VA +EA APAPGP+S A +G+PAIGSL+GASLLS AAYYL
Subjt:  MEMKKIACAVLFAAATVTAVVAADEALAPAPGPSSGAGIGVPAIGSLVGASLLSFAAYYL
A0A6J1J6Y9 arabinogalactan peptide 23-like1.5e-1586.67Show/hide
Query:  MEMKKIACAVLFAAATVTAVVAADEALAPAPGPSSGAGIGVPAIGSLVGASLLSFAAYYL
        MEMKKIACAVLFAAATV+AVVA DEALAPAPGPSSGA  G+PAIGS +GASLLS AAYYL
Subjt:  MEMKKIACAVLFAAATVTAVVAADEALAPAPGPSSGAGIGVPAIGSLVGASLLSFAAYYL
A0A6J1K873 arabinogalactan peptide 23-like2.9e-1480Show/hide
Query:  MEMKKIACAVLFAAATVTAVVAADEALAPAPGPSSGAGIGVPAIGSLVGASLLSFAAYYL
        MEM KI CA+LFAAATV+AVVA DEA APAPGP+SGA +G+PAIGSL+GASLLS AAYYL
Subjt:  MEMKKIACAVLFAAATVTAVVAADEALAPAPGPSSGAGIGVPAIGSLVGASLLSFAAYYL
SwissProt top hitse value%identityAlignment
Q8S2W4 Arabinogalactan protein 233.1e-1370Show/hide
Query:  MEMKKIACAVLFAAATVTAVVAADEALAPAPGPSSGAGIGVPAIGSLVGASLLSFAAYYL
        MEMKKIAC VLFAAA++TAV+AA+E  APAPGP+S A   +PA+GSLVGASL+S  +YYL
Subjt:  MEMKKIACAVLFAAATVTAVVAADEALAPAPGPSSGAGIGVPAIGSLVGASLLSFAAYYL
Arabidopsis top hitse value%identityAlignment
AT2G41905.1 BEST Arabidopsis thaliana protein match is: arabinogalactan protein 23 (TAIR:AT3G57690.1)9.2e-1372.13Show/hide
Query:  MEMKKIACAVLFAAATVTAVVAADEALAPAPGP-SSGAGIGVPAIGSLVGASLLSFAAYYL
        MEMKKIAC V+FAAA++TAV+AA E  APAPGP +SGA + VPA+GSLVGASL+S  AYYL
Subjt:  MEMKKIACAVLFAAATVTAVVAADEALAPAPGP-SSGAGIGVPAIGSLVGASLLSFAAYYL
AT3G57690.1 arabinogalactan protein 232.2e-1470Show/hide
Query:  MEMKKIACAVLFAAATVTAVVAADEALAPAPGPSSGAGIGVPAIGSLVGASLLSFAAYYL
        MEMKKIAC VLFAAA++TAV+AA+E  APAPGP+S A   +PA+GSLVGASL+S  +YYL
Subjt:  MEMKKIACAVLFAAATVTAVVAADEALAPAPGPSSGAGIGVPAIGSLVGASLLSFAAYYL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATGAAGAAGATCGCCTGCGCCGTCCTCTTCGCTGCCGCAACCGTCACCGCCGTCGTAGCTGCAGATGAGGCCTTGGCTCCAGCACCTGGACCAAGCAGCGGCGC
TGGCATTGGTGTCCCGGCAATTGGGTCTCTCGTCGGCGCTTCCTTGCTCTCCTTCGCCGCTTACTACTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATGAAGAAGATCGCCTGCGCCGTCCTCTTCGCTGCCGCAACCGTCACCGCCGTCGTAGCTGCAGATGAGGCCTTGGCTCCAGCACCTGGACCAAGCAGCGGCGC
TGGCATTGGTGTCCCGGCAATTGGGTCTCTCGTCGGCGCTTCCTTGCTCTCCTTCGCCGCTTACTACTTGTAA
Protein sequenceShow/hide protein sequence
MEMKKIACAVLFAAATVTAVVAADEALAPAPGPSSGAGIGVPAIGSLVGASLLSFAAYYL