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CSPI03G30060 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G30060
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTransmembrane protein, putative
Genome locationChr3:27525236..27525523
RNA-Seq ExpressionCSPI03G30060
SyntenyCSPI03G30060
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606858.1 hypothetical protein SDJN03_00200, partial [Cucurbita argyrosperma subsp. sororia]2.3e-2873.4Show/hide
Query:  MTPIFDTDAGEMFVRIAMFVFIQLLVYLILSKSSNLFSNDQKVRSLSFKPARSVSIRRFLAALSDLPPGGELSPSTKVSTPSSARRDRSDDGGR
        M PI + DAGE FV+IAMF+ +QLLVY ILS+SS+LFS DQK++SLSFKPARSVSIRRFLAALSD+P GGELSPS++V TPS   R+ SDDGGR
Subjt:  MTPIFDTDAGEMFVRIAMFVFIQLLVYLILSKSSNLFSNDQKVRSLSFKPARSVSIRRFLAALSDLPPGGELSPSTKVSTPSSARRDRSDDGGR

KAG7018107.1 hypothetical protein SDJN02_19975, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-2976.6Show/hide
Query:  MTPIFDTDAGEMFVRIAMFVFIQLLVYLILSKSSNLFSNDQKVRSLSFKPARSVSIRRFLAALSDLPPGGELSPSTKVSTPSSARRDRSDDGGR
        M  I + D   +F++IAMFVF+Q+LVYLILSKSSNLFSND+K+RSLSFKPARSVSIRR LAALSDLPPGGELSPS+ V TPSS RR+RSDD GR
Subjt:  MTPIFDTDAGEMFVRIAMFVFIQLLVYLILSKSSNLFSNDQKVRSLSFKPARSVSIRRFLAALSDLPPGGELSPSTKVSTPSSARRDRSDDGGR

XP_008461750.1 PREDICTED: uncharacterized protein LOC103500281 [Cucumis melo]2.9e-3184.21Show/hide
Query:  MTPIFDTDAGEMFVRIAMFVFIQLLVYLILSKSSNLFSNDQKVRSLSFKPARSVSIRRFLAALSDLPPGGELSPSTKVSTPSSARRDRSDDGGRL
        MTPI +TDAGEMFVRIAMFVF+QLLVYLILSKSSNLFSNDQK+RSLSFKPARSVSIRRFLAALSDLPPGGELS       PSS RR RSDDG +L
Subjt:  MTPIFDTDAGEMFVRIAMFVFIQLLVYLILSKSSNLFSNDQKVRSLSFKPARSVSIRRFLAALSDLPPGGELSPSTKVSTPSSARRDRSDDGGRL

XP_011651805.2 uncharacterized protein LOC105434941 [Cucumis sativus]8.1e-42100Show/hide
Query:  MTPIFDTDAGEMFVRIAMFVFIQLLVYLILSKSSNLFSNDQKVRSLSFKPARSVSIRRFLAALSDLPPGGELSPSTKVSTPSSARRDRSDDGGRL
        MTPIFDTDAGEMFVRIAMFVFIQLLVYLILSKSSNLFSNDQKVRSLSFKPARSVSIRRFLAALSDLPPGGELSPSTKVSTPSSARRDRSDDGGRL
Subjt:  MTPIFDTDAGEMFVRIAMFVFIQLLVYLILSKSSNLFSNDQKVRSLSFKPARSVSIRRFLAALSDLPPGGELSPSTKVSTPSSARRDRSDDGGRL

XP_038905322.1 uncharacterized protein LOC120091388 [Benincasa hispida]1.8e-3382.98Show/hide
Query:  MTPIFDTDAGEMFVRIAMFVFIQLLVYLILSKSSNLFSNDQKVRSLSFKPARSVSIRRFLAALSDLPPGGELSPSTKVSTPSSARRDRSDDGGR
        MTPI ++D  EMFV+IAMF F+QLLVYLILSKSSNLFSNDQK+RSLSFKPARSVSIRRFLAALSDLPPGGE+SP+ +V TPSS RRD SDDGGR
Subjt:  MTPIFDTDAGEMFVRIAMFVFIQLLVYLILSKSSNLFSNDQKVRSLSFKPARSVSIRRFLAALSDLPPGGELSPSTKVSTPSSARRDRSDDGGR

TrEMBL top hitse value%identityAlignment
A0A0A0LD48 Uncharacterized protein4.7e-1994.74Show/hide
Query:  NDQKVRSLSFKPARSVSIRRFLAALSDLPPGGELSPSTKVSTPSSARRDRSDDGGRL
        N  KVRSLSFKPARSVSIRRFLAALSDLPPGGELSPSTKVSTPSSAR DRSDDGGRL
Subjt:  NDQKVRSLSFKPARSVSIRRFLAALSDLPPGGELSPSTKVSTPSSARRDRSDDGGRL

A0A1S3CFW1 uncharacterized protein LOC1035002811.4e-3184.21Show/hide
Query:  MTPIFDTDAGEMFVRIAMFVFIQLLVYLILSKSSNLFSNDQKVRSLSFKPARSVSIRRFLAALSDLPPGGELSPSTKVSTPSSARRDRSDDGGRL
        MTPI +TDAGEMFVRIAMFVF+QLLVYLILSKSSNLFSNDQK+RSLSFKPARSVSIRRFLAALSDLPPGGELS       PSS RR RSDDG +L
Subjt:  MTPIFDTDAGEMFVRIAMFVFIQLLVYLILSKSSNLFSNDQKVRSLSFKPARSVSIRRFLAALSDLPPGGELSPSTKVSTPSSARRDRSDDGGRL

A0A5A7UC63 Uncharacterized protein1.4e-3184.21Show/hide
Query:  MTPIFDTDAGEMFVRIAMFVFIQLLVYLILSKSSNLFSNDQKVRSLSFKPARSVSIRRFLAALSDLPPGGELSPSTKVSTPSSARRDRSDDGGRL
        MTPI +TDAGEMFVRIAMFVF+QLLVYLILSKSSNLFSNDQK+RSLSFKPARSVSIRRFLAALSDLPPGGELS       PSS RR RSDDG +L
Subjt:  MTPIFDTDAGEMFVRIAMFVFIQLLVYLILSKSSNLFSNDQKVRSLSFKPARSVSIRRFLAALSDLPPGGELSPSTKVSTPSSARRDRSDDGGRL

A0A6J0PQA3 uncharacterized protein LOC1095065091.4e-1565Show/hide
Query:  EMFVRIAMFVFIQLLVYLILSKSSNLFSNDQKVRSLSFKPARSVSIRRFLAALSDLPPGGELSPSTKVSTPSSARRDRSD
        ++ +++AMFV +Q LVYLILSKSSN+FS   K RSLSF+  RSVSIRR LAALSDLPPGGE SPS+ VS  SS   D  D
Subjt:  EMFVRIAMFVFIQLLVYLILSKSSNLFSNDQKVRSLSFKPARSVSIRRFLAALSDLPPGGELSPSTKVSTPSSARRDRSD

B9REM2 Uncharacterized protein6.3e-1667.57Show/hide
Query:  IFDTDAGEMFVRIAMFVFIQLLVYLILSKSSNLFSNDQKVRSLSFKPARSVSIRRFLAALSDLPPGGELSPSTK
        I ++  G+M +++AMF  +Q LVY+ILSKSSN+FSN  K RS SFKPARSVSIRRFLAAL DLP  GELSPS K
Subjt:  IFDTDAGEMFVRIAMFVFIQLLVYLILSKSSNLFSNDQKVRSLSFKPARSVSIRRFLAALSDLPPGGELSPSTK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G05575.1 unknown protein2.5e-1256.92Show/hide
Query:  MFVRIAMFVFIQLLVYLILSKSSNLFSNDQKV-RSLSFKPARSVSIRRFLAALSDLPPGGELSPS
        M +++++F  IQ LVYLILSKSS++FS  + + R+ SF+ ARS+SIRR LA L D+P GGE+SPS
Subjt:  MFVRIAMFVFIQLLVYLILSKSSNLFSNDQKV-RSLSFKPARSVSIRRFLAALSDLPPGGELSPS

AT2G31945.1 unknown protein1.0e-1350.63Show/hide
Query:  DTDAGEMFVRIAMFVFIQLLVYLILSKSSNLFSNDQKV-RSLSFKPARSVSIRRFLAALSDLPPGGELSPSTKVSTPSS
        D   G M +++A+F  +Q LVYLIL KSS +F+    + R+ SF+P RSVSIRR LAAL D+P G ++SPS+  S+ SS
Subjt:  DTDAGEMFVRIAMFVFIQLLVYLILSKSSNLFSNDQKV-RSLSFKPARSVSIRRFLAALSDLPPGGELSPSTKVSTPSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGCCGATTTTCGATACCGACGCCGGCGAGATGTTCGTCAGAATCGCCATGTTCGTCTTTATTCAGCTTCTTGTCTATTTGATTCTCTCCAAATCCTCCAATCTCTT
CTCCAACGACCAGAAAGTGAGATCTCTCAGCTTTAAACCGGCTCGTTCCGTCAGTATTCGCCGGTTTCTGGCCGCTCTTTCTGACCTTCCTCCCGGTGGTGAGCTTTCTC
CGTCGACAAAAGTTTCCACTCCATCGTCGGCTCGTCGCGATCGTTCCGATGATGGTGGCAGGTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGCCGATTTTCGATACCGACGCCGGCGAGATGTTCGTCAGAATCGCCATGTTCGTCTTTATTCAGCTTCTTGTCTATTTGATTCTCTCCAAATCCTCCAATCTCTT
CTCCAACGACCAGAAAGTGAGATCTCTCAGCTTTAAACCGGCTCGTTCCGTCAGTATTCGCCGGTTTCTGGCCGCTCTTTCTGACCTTCCTCCCGGTGGTGAGCTTTCTC
CGTCGACAAAAGTTTCCACTCCATCGTCGGCTCGTCGCGATCGTTCCGATGATGGTGGCAGGTTGTAA
Protein sequenceShow/hide protein sequence
MTPIFDTDAGEMFVRIAMFVFIQLLVYLILSKSSNLFSNDQKVRSLSFKPARSVSIRRFLAALSDLPPGGELSPSTKVSTPSSARRDRSDDGGRL