CuGenDBv2

Gene ID	CSPI03G30160
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	disease resistance protein RGA2-like
Genome location	Chr3:27573073..27573642
RNA-Seq Expression	CSPI03G30160
Synteny	CSPI03G30160
Gene Ontology terms	GO:0006952 - defense response (biological process) GO:0043531 - ADP binding (molecular function)
InterPro domains	IPR041118 - Rx, N-terminal

Homology

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GenBank top hits

e value

%identity

Alignment

ABB91438.1 R-FOM-2 [Cucumis melo]

1.4e-43

86.11

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Query:  MLKKVLKVGGEQTGLAWGFQEHLSNLQNWLLKAEAFLRDINTRKLHHDYVRIRVDDLQHLVYQADDLLDEIVYEDLRQKVHTRKMKKVSDFFSPSANVLI
        MLKKVLKV  EQTGLAWGFQ+HLS LQ WLLKAEAFLR+INTRKLHHD VR+ VDDL+HLVYQADDLLDEIVYEDLRQKV TRKMKKV DFFSPS NVLI
Subjt:  MLKKVLKVGGEQTGLAWGFQEHLSNLQNWLLKAEAFLRDINTRKLHHDYVRIRVDDLQHLVYQADDLLDEIVYEDLRQKVHTRKMKKVSDFFSPSANVLI

Query:  FHLNMPKK
        F LNM KK
Subjt:  FHLNMPKK

KAA0043027.1 R-FOM-2 [Cucumis melo var. makuwa]

1.4e-43

86.11

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Query:  MLKKVLKVGGEQTGLAWGFQEHLSNLQNWLLKAEAFLRDINTRKLHHDYVRIRVDDLQHLVYQADDLLDEIVYEDLRQKVHTRKMKKVSDFFSPSANVLI
        MLKKVLKV  EQTGLAWGFQ+HLS LQ WLLKAEAFLR+INTRKLHHD VR+ VDDL+HLVYQADDLLDEIVYEDLRQKV TRKMKKV DFFSPS NVLI
Subjt:  MLKKVLKVGGEQTGLAWGFQEHLSNLQNWLLKAEAFLRDINTRKLHHDYVRIRVDDLQHLVYQADDLLDEIVYEDLRQKVHTRKMKKVSDFFSPSANVLI

Query:  FHLNMPKK
        F LNM KK
Subjt:  FHLNMPKK

TYK05688.1 R-FOM-2 [Cucumis melo var. makuwa]

1.4e-43

86.11

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Query:  MLKKVLKVGGEQTGLAWGFQEHLSNLQNWLLKAEAFLRDINTRKLHHDYVRIRVDDLQHLVYQADDLLDEIVYEDLRQKVHTRKMKKVSDFFSPSANVLI
        MLKKVLKV GEQTGLAWGF+EHLS LQ WLLKAEAFLRDINTRKLHHD VR+ VDDLQHLVYQADDLLDEIVYEDLRQKV  RK KKV DFFSPS NVLI
Subjt:  MLKKVLKVGGEQTGLAWGFQEHLSNLQNWLLKAEAFLRDINTRKLHHDYVRIRVDDLQHLVYQADDLLDEIVYEDLRQKVHTRKMKKVSDFFSPSANVLI

Query:  FHLNMPKK
        F  NM KK
Subjt:  FHLNMPKK

XP_008459150.1 PREDICTED: putative disease resistance protein RGA3 [Cucumis melo]

3.6e-42

84.26

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Query:  MLKKVLKVGGEQTGLAWGFQEHLSNLQNWLLKAEAFLRDINTRKLHHDYVRIRVDDLQHLVYQADDLLDEIVYEDLRQKVHTRKMKKVSDFFSPSANVLI
        MLKKVLKV  EQ GLAWGFQ+HLS LQ WLLKAEAFLR+INTRKLHHD VR+ VDDL+HLVYQADDLLDEIVYE LRQKV TRKMKKV DFFSPS NVLI
Subjt:  MLKKVLKVGGEQTGLAWGFQEHLSNLQNWLLKAEAFLRDINTRKLHHDYVRIRVDDLQHLVYQADDLLDEIVYEDLRQKVHTRKMKKVSDFFSPSANVLI

Query:  FHLNMPKK
        F LNM KK
Subjt:  FHLNMPKK

XP_011650071.2 disease resistance protein RGA2 [Cucumis sativus]

3.8e-44

88.79

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Query:  LKKVLKVGGEQTGLAWGFQEHLSNLQNWLLKAEAFLRDINTRKLHHDYVRIRVDDLQHLVYQADDLLDEIVYEDLRQKVHTRKMKKVSDFFSPSANVLIF
        LKKVLKV GEQTGLAWGFQEHLSNLQ WLLKAEAFLRDIN RKLH D VR+ VDDLQHLVYQADDLLDEIVYEDLRQKV TRKMKKV DFFSPS NVLIF
Subjt:  LKKVLKVGGEQTGLAWGFQEHLSNLQNWLLKAEAFLRDINTRKLHHDYVRIRVDDLQHLVYQADDLLDEIVYEDLRQKVHTRKMKKVSDFFSPSANVLIF

Query:  HLNMPKK
         LNM KK
Subjt:  HLNMPKK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TG70 Disease resistance protein RGA2-like

1.7e-42

83.33

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Query:  MLKKVLKVGGEQTGLAWGFQEHLSNLQNWLLKAEAFLRDINTRKLHHDYVRIRVDDLQHLVYQADDLLDEIVYEDLRQKVHTRKMKKVSDFFSPSANVLI
        MLKKVLKV  EQTGLAWGFQ+HLS LQ WLLKAEAFLRDINTRKLHHD VR+ VDDL+HLVYQADDLLDEIVYE LRQKVHTRKMKKV DFFSPS+N  I
Subjt:  MLKKVLKVGGEQTGLAWGFQEHLSNLQNWLLKAEAFLRDINTRKLHHDYVRIRVDDLQHLVYQADDLLDEIVYEDLRQKVHTRKMKKVSDFFSPSANVLI

Query:  FHLNMPKK
        F  NM  K
Subjt:  FHLNMPKK

A0A5A7TMK8 R-FOM-2

7.0e-44

86.11

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Query:  MLKKVLKVGGEQTGLAWGFQEHLSNLQNWLLKAEAFLRDINTRKLHHDYVRIRVDDLQHLVYQADDLLDEIVYEDLRQKVHTRKMKKVSDFFSPSANVLI
        MLKKVLKV  EQTGLAWGFQ+HLS LQ WLLKAEAFLR+INTRKLHHD VR+ VDDL+HLVYQADDLLDEIVYEDLRQKV TRKMKKV DFFSPS NVLI
Subjt:  MLKKVLKVGGEQTGLAWGFQEHLSNLQNWLLKAEAFLRDINTRKLHHDYVRIRVDDLQHLVYQADDLLDEIVYEDLRQKVHTRKMKKVSDFFSPSANVLI

Query:  FHLNMPKK
        F LNM KK
Subjt:  FHLNMPKK

A0A5D3C395 R-FOM-2

7.0e-44

86.11

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Query:  MLKKVLKVGGEQTGLAWGFQEHLSNLQNWLLKAEAFLRDINTRKLHHDYVRIRVDDLQHLVYQADDLLDEIVYEDLRQKVHTRKMKKVSDFFSPSANVLI
        MLKKVLKV GEQTGLAWGF+EHLS LQ WLLKAEAFLRDINTRKLHHD VR+ VDDLQHLVYQADDLLDEIVYEDLRQKV  RK KKV DFFSPS NVLI
Subjt:  MLKKVLKVGGEQTGLAWGFQEHLSNLQNWLLKAEAFLRDINTRKLHHDYVRIRVDDLQHLVYQADDLLDEIVYEDLRQKVHTRKMKKVSDFFSPSANVLI

Query:  FHLNMPKK
        F  NM KK
Subjt:  FHLNMPKK

A0A5D3C5G4 Putative disease resistance protein RGA3

1.7e-42

84.26

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Query:  MLKKVLKVGGEQTGLAWGFQEHLSNLQNWLLKAEAFLRDINTRKLHHDYVRIRVDDLQHLVYQADDLLDEIVYEDLRQKVHTRKMKKVSDFFSPSANVLI
        MLKKVLKV  EQ GLAWGFQ+HLS LQ WLLKAEAFLR+INTRKLHHD VR+ VDDL+HLVYQADDLLDEIVYE LRQKV TRKMKKV DFFSPS NVLI
Subjt:  MLKKVLKVGGEQTGLAWGFQEHLSNLQNWLLKAEAFLRDINTRKLHHDYVRIRVDDLQHLVYQADDLLDEIVYEDLRQKVHTRKMKKVSDFFSPSANVLI

Query:  FHLNMPKK
        F LNM KK
Subjt:  FHLNMPKK

Q2V727 R-FOM-2

7.0e-44

86.11

Show/hide

Query:  MLKKVLKVGGEQTGLAWGFQEHLSNLQNWLLKAEAFLRDINTRKLHHDYVRIRVDDLQHLVYQADDLLDEIVYEDLRQKVHTRKMKKVSDFFSPSANVLI
        MLKKVLKV  EQTGLAWGFQ+HLS LQ WLLKAEAFLR+INTRKLHHD VR+ VDDL+HLVYQADDLLDEIVYEDLRQKV TRKMKKV DFFSPS NVLI
Subjt:  MLKKVLKVGGEQTGLAWGFQEHLSNLQNWLLKAEAFLRDINTRKLHHDYVRIRVDDLQHLVYQADDLLDEIVYEDLRQKVHTRKMKKVSDFFSPSANVLI

Query:  FHLNMPKK
        F LNM KK
Subjt:  FHLNMPKK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G50950.1 HOPZ-ACTIVATED RESISTANCE 1

4.1e-04

32.84

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Query:  LKKVLKVGGEQTGLAWGFQEHLSNLQNWLLKAEAFLRDINTRKLHHDYVRIRVDDLQHLVYQADDLL
        L+K L +  E+      +++ L +LQ+ L   ++FL+D   +K  ++ +R  V DL+ LVY+A+D+L
Subjt:  LKKVLKVGGEQTGLAWGFQEHLSNLQNWLLKAEAFLRDINTRKLHHDYVRIRVDDLQHLVYQADDLL

AT3G50950.2 HOPZ-ACTIVATED RESISTANCE 1

4.1e-04

32.84

Show/hide

Query:  LKKVLKVGGEQTGLAWGFQEHLSNLQNWLLKAEAFLRDINTRKLHHDYVRIRVDDLQHLVYQADDLL
        L+K L +  E+      +++ L +LQ+ L   ++FL+D   +K  ++ +R  V DL+ LVY+A+D+L
Subjt:  LKKVLKVGGEQTGLAWGFQEHLSNLQNWLLKAEAFLRDINTRKLHHDYVRIRVDDLQHLVYQADDLL

Sequences

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CDS sequence

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ATGTTGAAGAAGGTGTTGAAGGTTGGAGGGGAGCAAACTGGCCTAGCATGGGGCTTCCAGGAACATCTCTCCAACCTCCAAAATTGGCTACTCAAGGCTGAAGCTTTTTT
ACGTGATATCAACACGAGAAAATTACATCATGATTATGTGAGGATCCGGGTGGACGATCTTCAACATCTTGTTTATCAAGCCGATGATCTATTAGACGAAATTGTTTATG
AAGATCTTCGACAAAAGGTCCATACAAGAAAAATGAAGAAGGTGAGTGATTTCTTTTCTCCTTCTGCCAATGTGTTGATCTTTCATCTTAACATGCCAAAAAAAAATGAT
GACTCTTGTAGAATTGTTAGAAAAGCATTACAATGA

mRNA sequence

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CTGTCCCAAGTCTTCATTGACTTACAAACACCACTTTGATTTGTACATATCCTTTGGATTTTAGATCTAATTCTTCTCCAAATCATTTGAGCATTCTGTCTGAGAGAGAA
CCTTAGAATGATTTCCTATGGACTTTTGCTGTGGAAGAAATGTTGAAGAAGGTGTTGAAGGTTGGAGGGGAGCAAACTGGCCTAGCATGGGGCTTCCAGGAACATCTCTC
CAACCTCCAAAATTGGCTACTCAAGGCTGAAGCTTTTTTACGTGATATCAACACGAGAAAATTACATCATGATTATGTGAGGATCCGGGTGGACGATCTTCAACATCTTG
TTTATCAAGCCGATGATCTATTAGACGAAATTGTTTATGAAGATCTTCGACAAAAGGTCCATACAAGAAAAATGAAGAAGGTGAGTGATTTCTTTTCTCCTTCTGCCAAT
GTGTTGATCTTTCATCTTAACATGCCAAAAAAAAATGATGACTCTTGTAGAATTGTTAGAAAAGCATTACAATGAGGAACTTTTTGATATAGATCAAACACTTTTTTATG
TTAAGATGAATAACTTTGCG

Protein sequence

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MLKKVLKVGGEQTGLAWGFQEHLSNLQNWLLKAEAFLRDINTRKLHHDYVRIRVDDLQHLVYQADDLLDEIVYEDLRQKVHTRKMKKVSDFFSPSANVLIFHLNMPKKND
DSCRIVRKALQ

CSPI03G30160 (gene) of Cucumber (PI 183967) v1 genome