; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G30220 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G30220
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr3:27621266..27622915
RNA-Seq ExpressionCSPI03G30220
SyntenyCSPI03G30220
Gene Ontology termsGO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011651806.1 uncharacterized protein LOC101216392 [Cucumis sativus]1.1e-43100Show/hide
Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGTQRELCRLEHAKASLAKGKLKFL
        MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGTQRELCRLEHAKASLAKGKLKFL
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGTQRELCRLEHAKASLAKGKLKFL
XP_016902957.1 PREDICTED: uncharacterized protein LOC103501213 [Cucumis melo]4.3e-4398.95Show/hide
Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGTQRELCRLEHAKASLAKGKLKFL
        MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGTQRELCRLEHAKASLA GKLKFL
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGTQRELCRLEHAKASLAKGKLKFL
XP_022153454.1 uncharacterized protein LOC111020959 [Momordica charantia]2.4e-4194.74Show/hide
Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGTQRELCRLEHAKASLAKGKLKFL
        MVLDSILASPHRRSPSFRKQFPANELGSWS LF RHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTG Q+ELCR+EHAKASLAKGKLKFL
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGTQRELCRLEHAKASLAKGKLKFL
XP_022948745.1 uncharacterized protein LOC111452323 [Cucurbita moschata]4.9e-3991.58Show/hide
Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGTQRELCRLEHAKASLAKGKLKFL
        MVLDSILASP RR+P+FRKQFPANELGSWSTLF RHRFLLTALALLT LCTIYLYFAITLGATASSCSGLTG Q+ELC LEHAKASLAKGKLKFL
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGTQRELCRLEHAKASLAKGKLKFL
XP_038903507.1 uncharacterized protein LOC120090090 [Benincasa hispida]4.8e-4296.81Show/hide
Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGTQRELCRLEHAKASLAKGKLKF
        MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFA+TLGATASSCSGLTG QRELCRLEHAKASL KGKLKF
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGTQRELCRLEHAKASLAKGKLKF
TrEMBL top hitse value%identityAlignment
A0A0A0L9L6 Uncharacterized protein5.5e-44100Show/hide
Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGTQRELCRLEHAKASLAKGKLKFL
        MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGTQRELCRLEHAKASLAKGKLKFL
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGTQRELCRLEHAKASLAKGKLKFL
A0A1S4E410 uncharacterized protein LOC1035012132.1e-4398.95Show/hide
Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGTQRELCRLEHAKASLAKGKLKFL
        MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGTQRELCRLEHAKASLA GKLKFL
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGTQRELCRLEHAKASLAKGKLKFL
A0A5D3DCR7 Uncharacterized protein2.1e-4398.95Show/hide
Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGTQRELCRLEHAKASLAKGKLKFL
        MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGTQRELCRLEHAKASLA GKLKFL
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGTQRELCRLEHAKASLAKGKLKFL
A0A6J1DJ35 uncharacterized protein LOC1110209591.1e-4194.74Show/hide
Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGTQRELCRLEHAKASLAKGKLKFL
        MVLDSILASPHRRSPSFRKQFPANELGSWS LF RHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTG Q+ELCR+EHAKASLAKGKLKFL
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGTQRELCRLEHAKASLAKGKLKFL
A0A6J1GA22 uncharacterized protein LOC1114523232.4e-3991.58Show/hide
Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGTQRELCRLEHAKASLAKGKLKFL
        MVLDSILASP RR+P+FRKQFPANELGSWSTLF RHRFLLTALALLT LCTIYLYFAITLGATASSCSGLTG Q+ELC LEHAKASLAKGKLKFL
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGTQRELCRLEHAKASLAKGKLKFL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16170.1 unknown protein4.3e-2561.7Show/hide
Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGTQRELCRLEHAKASLAKGKLKF
        MVLD +++SP RR    +KQ+  +ELGSWSTL +RH++LLTALALL FLCT+YLYFA+TLGA  SSC GLTG  + +C+L+  +A L+KGKLKF
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGTQRELCRLEHAKASLAKGKLKF
AT1G79660.1 unknown protein8.2e-2457.45Show/hide
Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGTQRELCRLEHAKASLAKGKLKF
        MVLD I++SP RR  + +KQ+  ++LGS ST+ +RHRFLLTA+ LL FLCTIY+YFA+TLGA    CSG+TG  + +C++EH +AS + GKLKF
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGTQRELCRLEHAKASLAKGKLKF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCTTGACAGCATTCTAGCTTCTCCCCATAGGAGATCCCCATCATTCAGAAAGCAGTTTCCTGCAAATGAATTGGGCAGTTGGTCTACTCTCTTCAAGCGGCATCG
CTTCCTCTTAACCGCGCTAGCACTCTTAACTTTCCTTTGCACAATCTATCTTTACTTTGCTATCACTTTGGGTGCTACGGCGTCGTCTTGTTCGGGTTTGACTGGAACTC
AAAGAGAGTTGTGTCGTCTGGAGCATGCTAAAGCTTCTCTGGCTAAAGGCAAACTAAAATTTCTATGA
mRNA sequenceShow/hide mRNA sequence
CCCGTGTTTTTTCATATCCTTTCTAAAACCGTGACCCGCGGAATTGAAAATTCCTCCATCGTTATTATTATTACTTATTAGTGCTTCCCTCTCCCATTCTCCAAACAAAG
ACCAAAAACAGGCCAAACACAATTTCCATTCTCCATTACCTTTTCCATCAACTCTAAGATTTTGTGTTTGGTGCTAAATTTCAGAGGACATAGGAAGATTAGTGCTCTTG
AATATGGTTCTTGACAGCATTCTAGCTTCTCCCCATAGGAGATCCCCATCATTCAGAAAGCAGTTTCCTGCAAATGAATTGGGCAGTTGGTCTACTCTCTTCAAGCGGCA
TCGCTTCCTCTTAACCGCGCTAGCACTCTTAACTTTCCTTTGCACAATCTATCTTTACTTTGCTATCACTTTGGGTGCTACGGCGTCGTCTTGTTCGGGTTTGACTGGAA
CTCAAAGAGAGTTGTGTCGTCTGGAGCATGCTAAAGCTTCTCTGGCTAAAGGCAAACTAAAATTTCTATGATACGCACGTAGGGACTTCAAGGTACAAAACCTTCTCATG
TATTGGTCCTTCTCTTTGGTGGGCTTTGTATTTATAAAAAAGAGAAATCGATGATTATTATAGATCAAAAGTTCATTCATCCTTTTTGATTCACACATATAACTTATAAG
ATATAGCAGAATGTTATTAACATTGCTTTCTTGCATTAATTTGTTGTTGTTTTTTCTTTTCTTTTCTTTTTTTTGTGATA
Protein sequenceShow/hide protein sequence
MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGTQRELCRLEHAKASLAKGKLKFL