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CSPI03G30580 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G30580
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionProtein TonB isoform X1
Genome locationChr3:27989150..27989578
RNA-Seq ExpressionCSPI03G30580
SyntenyCSPI03G30580
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650967.1 hypothetical protein Csa_001119, partial [Cucumis sativus]6.9e-18100Show/hide
Query:  ITIPQSTETSRKLILDDGNGECVLYTSSLVSGQDTFSASPLIRPASNTSN
        ITIPQSTETSRKLILDDGNGECVLYTSSLVSGQDTFSASPLIRPASNTSN
Subjt:  ITIPQSTETSRKLILDDGNGECVLYTSSLVSGQDTFSASPLIRPASNTSN

KAG7017185.1 hypothetical protein SDJN02_19047 [Cucurbita argyrosperma subsp. argyrosperma]2.5e-1542.95Show/hide
Query:  ITIPQSTETSRKLILDDGNGECVLYTSSLVSGQDTFSASPLIRPASNTSNRARIFLSLELLKVGMMIGMNK-----------------------------
        ITIP +TETS KLILD GNGECVLY S LVSG++ F   P     +   N A  FL L +L  G      K                             
Subjt:  ITIPQSTETSRKLILDDGNGECVLYTSSLVSGQDTFSASPLIRPASNTSNRARIFLSLELLKVGMMIGMNK-----------------------------

Query:  ---------------NSVNSPGRPHIGNISANELTARSNKDGWENDWDV
                       N+V SPG  HIG+ISAN LTARSNKDGWENDWDV
Subjt:  ---------------NSVNSPGRPHIGNISANELTARSNKDGWENDWDV

TYK24904.1 protein TonB isoform X1 [Cucumis melo var. makuwa]8.2e-2778.82Show/hide
Query:  ECVLYTSSLVSGQDTFSASPLIRPASNTSNRARIFLSLELLKVGMMIGMNKNSVNSPGRPHIGNISANELTARSNKDGWENDWDV
        E   +T  L+  + TFSAS LIRPASNTSNRARIFL L+ LKVGMMIGMNKNSV SPGRPHIGNISAN LTARSNKDG ENDWDV
Subjt:  ECVLYTSSLVSGQDTFSASPLIRPASNTSNRARIFLSLELLKVGMMIGMNKNSVNSPGRPHIGNISANELTARSNKDGWENDWDV

XP_023528429.1 uncharacterized protein LOC111791362 [Cucurbita pepo subsp. pepo]2.5e-1542.95Show/hide
Query:  ITIPQSTETSRKLILDDGNGECVLYTSSLVSGQDTFSASPLIRPASNTSNRARIFLSLELLKVGMMIGMNK-----------------------------
        ITIP +TETS KLILD GNGECVLY S LVSG++ F   P     +   N A  FL L +L  G      K                             
Subjt:  ITIPQSTETSRKLILDDGNGECVLYTSSLVSGQDTFSASPLIRPASNTSNRARIFLSLELLKVGMMIGMNK-----------------------------

Query:  ---------------NSVNSPGRPHIGNISANELTARSNKDGWENDWDV
                       N+V SPG  HIG+ISAN LTARSNKDGWENDWDV
Subjt:  ---------------NSVNSPGRPHIGNISANELTARSNKDGWENDWDV

XP_038904076.1 uncharacterized protein LOC120090465 [Benincasa hispida]5.0e-1641.22Show/hide
Query:  ITIPQSTETSRKLILDDGNGECVLYTSSLVSGQDTFSASPLIRPASNTSNRARIFLSLELLKVGMMIGM-------------------------------
        ITIP+  ETS KL+LD GNGECVLYT   VSGQD F   P     +   N A   +   L+  G                                    
Subjt:  ITIPQSTETSRKLILDDGNGECVLYTSSLVSGQDTFSASPLIRPASNTSNRARIFLSLELLKVGMMIGM-------------------------------

Query:  ------------NKNSVNSPGRPHIGNISANELTARSNKDGWENDWDV
                     +NSV SPG  HIGNISAN LTARSNKDGWENDWDV
Subjt:  ------------NKNSVNSPGRPHIGNISANELTARSNKDGWENDWDV

TrEMBL top hitse value%identityAlignment
A0A0A0LD85 Uncharacterized protein6.5e-22100Show/hide
Query:  ARIFLSLELLKVGMMIGMNKNSVNSPGRPHIGNISANELTARSNKDGWENDWDV
        ARIFLSLELLKVGMMIGMNKNSVNSPGRPHIGNISANELTARSNKDGWENDWDV
Subjt:  ARIFLSLELLKVGMMIGMNKNSVNSPGRPHIGNISANELTARSNKDGWENDWDV

A0A5D3DMT9 Protein TonB isoform X14.0e-2778.82Show/hide
Query:  ECVLYTSSLVSGQDTFSASPLIRPASNTSNRARIFLSLELLKVGMMIGMNKNSVNSPGRPHIGNISANELTARSNKDGWENDWDV
        E   +T  L+  + TFSAS LIRPASNTSNRARIFL L+ LKVGMMIGMNKNSV SPGRPHIGNISAN LTARSNKDG ENDWDV
Subjt:  ECVLYTSSLVSGQDTFSASPLIRPASNTSNRARIFLSLELLKVGMMIGMNKNSVNSPGRPHIGNISANELTARSNKDGWENDWDV

A0A6J1F4I5 uncharacterized protein LOC1114420921.6e-1542.95Show/hide
Query:  ITIPQSTETSRKLILDDGNGECVLYTSSLVSGQDTFSASPLIRPASNTSNRARIFLSLELLKVGMMIGMNK-----------------------------
        ITIP +TETS KLILD GNGECVLY S LVSG++ F   P     +   N A  FL L +L  G      K                             
Subjt:  ITIPQSTETSRKLILDDGNGECVLYTSSLVSGQDTFSASPLIRPASNTSNRARIFLSLELLKVGMMIGMNK-----------------------------

Query:  ---------------NSVNSPGRPHIGNISANELTARSNKDGWENDWDV
                       N+V SPG  HIG+ISAN LTARSNKDGWENDWDV
Subjt:  ---------------NSVNSPGRPHIGNISANELTARSNKDGWENDWDV

A0A6J1FLM5 uncharacterized protein LOC1114469305.0e-1439.86Show/hide
Query:  ITIPQSTETSRKLILDDGNGECVLYTSSLVSGQDTFSASPLIRPASNTSNRARIFL----------------------------------SLELLKVGMM
        ITIP +T    KL+LD GNGECVLYTS LVSG+D F   P         N A   +                                  S   +KV   
Subjt:  ITIPQSTETSRKLILDDGNGECVLYTSSLVSGQDTFSASPLIRPASNTSNRARIFL----------------------------------SLELLKVGMM

Query:  IGMN---------KNSVNSPGRPHIGNISANELTARSNKDGWENDWDV
         G +         +N+V SPG  HIG+ISAN LTAR NKDGWENDWDV
Subjt:  IGMN---------KNSVNSPGRPHIGNISANELTARSNKDGWENDWDV

A0A6J1J516 uncharacterized protein LOC1114814261.3e-1440.14Show/hide
Query:  ITIPQSTETSRKLILDDGNGECVLYTSSLVSGQDTFSASPLIRPASNTSNRARIFL-------------------------SLELLKVGMMIGMN-----
        ITIP +TETS KL+LD GNGECVLY S LVS ++ F   P     +   N A   +                          LE+        +N     
Subjt:  ITIPQSTETSRKLILDDGNGECVLYTSSLVSGQDTFSASPLIRPASNTSNRARIFL-------------------------SLELLKVGMMIGMN-----

Query:  ------------KNSVNSPGRPHIGNISANELTARSNKDGWENDWDV
                    +N+V SPG  HIG+ISAN LTARSNKDGWENDWDV
Subjt:  ------------KNSVNSPGRPHIGNISANELTARSNKDGWENDWDV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCACCATTCCTCAGTCGACTGAAACAAGCAGGAAGCTGATATTAGATGATGGAAATGGAGAGTGCGTGCTCTACACAAGCTCTCTTGTTTCTGGACAAGACACTTTTTC
TGCGTCTCCCCTAATTAGACCAGCTAGCAACACCAGTAACCGTGCCAGAATCTTCCTCAGCTTGGAACTGCTGAAGGTTGGGATGATGATTGGGATGAATAAAAATTCTG
TGAATTCACCAGGGAGGCCTCATATTGGAAACATTTCAGCTAATGAGCTTACTGCTAGGTCCAACAAAGATGGGTGGGAGAATGATTGGGATGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATCACCATTCCTCAGTCGACTGAAACAAGCAGGAAGCTGATATTAGATGATGGAAATGGAGAGTGCGTGCTCTACACAAGCTCTCTTGTTTCTGGACAAGACACTTTTTC
TGCGTCTCCCCTAATTAGACCAGCTAGCAACACCAGTAACCGTGCCAGAATCTTCCTCAGCTTGGAACTGCTGAAGGTTGGGATGATGATTGGGATGAATAAAAATTCTG
TGAATTCACCAGGGAGGCCTCATATTGGAAACATTTCAGCTAATGAGCTTACTGCTAGGTCCAACAAAGATGGGTGGGAGAATGATTGGGATGTTTAG
Protein sequenceShow/hide protein sequence
ITIPQSTETSRKLILDDGNGECVLYTSSLVSGQDTFSASPLIRPASNTSNRARIFLSLELLKVGMMIGMNKNSVNSPGRPHIGNISANELTARSNKDGWENDWDV