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CSPI03G30590 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G30590
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionB3 domain-containing transcription repressor VAL2
Genome locationChr3:27997665..27998414
RNA-Seq ExpressionCSPI03G30590
SyntenyCSPI03G30590
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044229.1 B3 domain-containing transcription repressor VAL2 [Cucumis melo var. makuwa]2.4e-0752.22Show/hide
Query:  MIDDVSKHFEETL------------PRSPPPTT--APNPPPSDAAPSPRSLCGCQTNHFCDGTGDPQ----QSQTSRVTRTTSTTTSDLR
        +IDDV K  +E +                PPTT     P PSDAAP+ RSL GCQT+H  D TGDPQ    QSQTS VTRT +TTTSDLR
Subjt:  MIDDVSKHFEETL------------PRSPPPTT--APNPPPSDAAPSPRSLCGCQTNHFCDGTGDPQ----QSQTSRVTRTTSTTTSDLR
KGN58688.1 hypothetical protein Csa_001621 [Cucumis sativus]1.2e-51100Show/hide
Query:  MRSRHAEKKMIDDVSKHFEETLPRSPPPTTAPNPPPSDAAPSPRSLCGCQTNHFCDGTGDPQQSQTSRVTRTTSTTTSDLRWLQPATTPAAFLDYPQPEL
        MRSRHAEKKMIDDVSKHFEETLPRSPPPTTAPNPPPSDAAPSPRSLCGCQTNHFCDGTGDPQQSQTSRVTRTTSTTTSDLRWLQPATTPAAFLDYPQPEL
Subjt:  MRSRHAEKKMIDDVSKHFEETLPRSPPPTTAPNPPPSDAAPSPRSLCGCQTNHFCDGTGDPQQSQTSRVTRTTSTTTSDLRWLQPATTPAAFLDYPQPEL

Query:  IWIP
        IWIP
Subjt:  IWIP
TYK24905.1 B3 domain-containing transcription repressor VAL2 [Cucumis melo var. makuwa]1.7e-0868.85Show/hide
Query:  PPTT--APNPPPSDAAPSPRSLCGCQTNHFCDGTGDPQ----QSQTSRVTRTTSTTTSDLR
        PPTT     P PSDAAP+ RSL GCQT+H  D TGDPQ    QSQTSRVTRT +TTTSDLR
Subjt:  PPTT--APNPPPSDAAPSPRSLCGCQTNHFCDGTGDPQ----QSQTSRVTRTTSTTTSDLR
TrEMBL top hitse value%identityAlignment
A0A0A0LA20 Uncharacterized protein5.9e-52100Show/hide
Query:  MRSRHAEKKMIDDVSKHFEETLPRSPPPTTAPNPPPSDAAPSPRSLCGCQTNHFCDGTGDPQQSQTSRVTRTTSTTTSDLRWLQPATTPAAFLDYPQPEL
        MRSRHAEKKMIDDVSKHFEETLPRSPPPTTAPNPPPSDAAPSPRSLCGCQTNHFCDGTGDPQQSQTSRVTRTTSTTTSDLRWLQPATTPAAFLDYPQPEL
Subjt:  MRSRHAEKKMIDDVSKHFEETLPRSPPPTTAPNPPPSDAAPSPRSLCGCQTNHFCDGTGDPQQSQTSRVTRTTSTTTSDLRWLQPATTPAAFLDYPQPEL

Query:  IWIP
        IWIP
Subjt:  IWIP
A0A5A7TSM7 B3 domain-containing transcription repressor VAL21.2e-0752.22Show/hide
Query:  MIDDVSKHFEETL------------PRSPPPTT--APNPPPSDAAPSPRSLCGCQTNHFCDGTGDPQ----QSQTSRVTRTTSTTTSDLR
        +IDDV K  +E +                PPTT     P PSDAAP+ RSL GCQT+H  D TGDPQ    QSQTS VTRT +TTTSDLR
Subjt:  MIDDVSKHFEETL------------PRSPPPTT--APNPPPSDAAPSPRSLCGCQTNHFCDGTGDPQ----QSQTSRVTRTTSTTTSDLR
A0A5D3DMR2 B3 domain-containing transcription repressor VAL28.1e-0968.85Show/hide
Query:  PPTT--APNPPPSDAAPSPRSLCGCQTNHFCDGTGDPQ----QSQTSRVTRTTSTTTSDLR
        PPTT     P PSDAAP+ RSL GCQT+H  D TGDPQ    QSQTSRVTRT +TTTSDLR
Subjt:  PPTT--APNPPPSDAAPSPRSLCGCQTNHFCDGTGDPQ----QSQTSRVTRTTSTTTSDLR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAGCAGGCATGCAGAAAAGAAGATGATTGATGATGTGTCCAAGCATTTTGAAGAAACCCTCCCACGCTCCCCACCACCAACTACTGCACCCAACCCACCCCCGTC
AGACGCCGCTCCTTCACCACGAAGTCTCTGCGGCTGCCAAACGAACCATTTCTGCGACGGTACTGGTGATCCACAACAATCTCAGACCTCCCGCGTTACGAGAACCACCA
GCACGACGACCTCAGATCTGAGGTGGCTCCAGCCAGCAACGACGCCCGCCGCATTTCTCGACTACCCTCAGCCCGAACTAATTTGGATCCCT
mRNA sequenceShow/hide mRNA sequence
ATGAGAAGCAGGCATGCAGAAAAGAAGATGATTGATGATGTGTCCAAGCATTTTGAAGAAACCCTCCCACGCTCCCCACCACCAACTACTGCACCCAACCCACCCCCGTC
AGACGCCGCTCCTTCACCACGAAGTCTCTGCGGCTGCCAAACGAACCATTTCTGCGACGGTACTGGTGATCCACAACAATCTCAGACCTCCCGCGTTACGAGAACCACCA
GCACGACGACCTCAGATCTGAGGTGGCTCCAGCCAGCAACGACGCCCGCCGCATTTCTCGACTACCCTCAGCCCGAACTAATTTGGATCCCT
Protein sequenceShow/hide protein sequence
MRSRHAEKKMIDDVSKHFEETLPRSPPPTTAPNPPPSDAAPSPRSLCGCQTNHFCDGTGDPQQSQTSRVTRTTSTTTSDLRWLQPATTPAAFLDYPQPELIWIP