; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G30960 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G30960
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr3:28171848..28173403
RNA-Seq ExpressionCSPI03G30960
SyntenyCSPI03G30960
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650975.1 hypothetical protein Csa_001201 [Cucumis sativus]1.7e-6297.66Show/hide
Query:  MDSAAIEKSPTWKGNRLQSTALSLLSFRGFFLTSVDVSNSGKPLLLSRERKNKRRMMGNTVRNGNRELFHPFSSFLLTTLHHLADYDALHFSCAAFPNAA
        MDSAAIEKSPT K NRLQSTALSLLSFRGFFLTSVDVSNSGKPLLLSRERKNKRRMMGNTVRNGNRELFHPFSSFLLTTLHHLADYDALHFSCAAFPNAA
Subjt:  MDSAAIEKSPTWKGNRLQSTALSLLSFRGFFLTSVDVSNSGKPLLLSRERKNKRRMMGNTVRNGNRELFHPFSSFLLTTLHHLADYDALHFSCAAFPNAA

Query:  ARQCTTEILKQEYLTKLIPIEDWGKIEN
        ARQCTTEILKQEYLTKLIPIEDWG IEN
Subjt:  ARQCTTEILKQEYLTKLIPIEDWGKIEN
TrEMBL top hitse value%identityAlignment
A0A0A0LA48 Uncharacterized protein1.6e-10698.49Show/hide
Query:  MPSSFDRPSPNQITVLMNHRQAVLFIPDLRLRIAVEFQLKHTKRCCKSLIEQEEPVKLRMDSAAIEKSPTWKGNRLQSTALSLLSFRGFFLTSVDVSNSG
        MPSSFDRPSPNQITVLMNHRQAVLFIPDLRLRIAVEFQLKHTKRCCKSLIEQEEPVKLRMDSAAIEKSPT K NRLQSTALSLLSFRGFFLTSVDVSNSG
Subjt:  MPSSFDRPSPNQITVLMNHRQAVLFIPDLRLRIAVEFQLKHTKRCCKSLIEQEEPVKLRMDSAAIEKSPTWKGNRLQSTALSLLSFRGFFLTSVDVSNSG

Query:  KPLLLSRERKNKRRMMGNTVRNGNRELFHPFSSFLLTTLHHLADYDALHFSCAAFPNAAARQCTTEILKQEYLTKLIPIEDWGKIENSISKDFDYWLYC
        KPLLLSRERKNKRRMMGNTVRNGNRELFHPFSSFLLTTLHHLADYDALHFSCAAFPNAAARQCTTEILKQEYLTKLIPIEDWG IENSISKDFDYWLYC
Subjt:  KPLLLSRERKNKRRMMGNTVRNGNRELFHPFSSFLLTTLHHLADYDALHFSCAAFPNAAARQCTTEILKQEYLTKLIPIEDWGKIENSISKDFDYWLYC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTCTTCATTTGATCGCCCCTCCCCTAATCAAATCACAGTTCTCATGAATCACCGCCAAGCAGTGTTGTTCATCCCTGATCTCCGGCTCCGAATTGCCGTGGAATT
TCAGCTCAAACATACCAAGCGATGCTGCAAAAGCCTAATTGAGCAAGAAGAACCAGTGAAACTCAGGATGGATAGCGCCGCGATAGAGAAGTCGCCAACCTGGAAAGGGA
ACCGCCTTCAATCAACGGCGCTATCCCTCCTGAGCTTCAGAGGATTCTTCTTAACTTCAGTCGATGTTTCCAACAGCGGCAAACCATTGTTATTAAGTAGAGAGAGAAAA
AACAAACGTAGGATGATGGGAAACACAGTGAGAAATGGCAATAGGGAATTGTTTCACCCCTTTTCTTCTTTCCTTTTGACTACTCTACACCATCTTGCCGACTACGATGC
TTTACACTTTTCTTGCGCTGCATTCCCCAACGCTGCTGCAAGGCAATGCACGACTGAAATACTAAAGCAGGAGTACTTAACGAAATTAATACCAATTGAAGACTGGGGCA
AGATTGAGAACAGTATCAGCAAAGATTTTGATTATTGGCTGTATTGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTTCTTCATTTGATCGCCCCTCCCCTAATCAAATCACAGTTCTCATGAATCACCGCCAAGCAGTGTTGTTCATCCCTGATCTCCGGCTCCGAATTGCCGTGGAATT
TCAGCTCAAACATACCAAGCGATGCTGCAAAAGCCTAATTGAGCAAGAAGAACCAGTGAAACTCAGGATGGATAGCGCCGCGATAGAGAAGTCGCCAACCTGGAAAGGGA
ACCGCCTTCAATCAACGGCGCTATCCCTCCTGAGCTTCAGAGGATTCTTCTTAACTTCAGTCGATGTTTCCAACAGCGGCAAACCATTGTTATTAAGTAGAGAGAGAAAA
AACAAACGTAGGATGATGGGAAACACAGTGAGAAATGGCAATAGGGAATTGTTTCACCCCTTTTCTTCTTTCCTTTTGACTACTCTACACCATCTTGCCGACTACGATGC
TTTACACTTTTCTTGCGCTGCATTCCCCAACGCTGCTGCAAGGCAATGCACGACTGAAATACTAAAGCAGGAGTACTTAACGAAATTAATACCAATTGAAGACTGGGGCA
AGATTGAGAACAGTATCAGCAAAGATTTTGATTATTGGCTGTATTGCTAG
Protein sequenceShow/hide protein sequence
MPSSFDRPSPNQITVLMNHRQAVLFIPDLRLRIAVEFQLKHTKRCCKSLIEQEEPVKLRMDSAAIEKSPTWKGNRLQSTALSLLSFRGFFLTSVDVSNSGKPLLLSRERK
NKRRMMGNTVRNGNRELFHPFSSFLLTTLHHLADYDALHFSCAAFPNAAARQCTTEILKQEYLTKLIPIEDWGKIENSISKDFDYWLYC