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CSPI03G32140 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G32140
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionlight-harvesting complex-like protein OHP1, chloroplastic
Genome locationChr3:28789305..28790804
RNA-Seq ExpressionCSPI03G32140
SyntenyCSPI03G32140
Gene Ontology termsGO:0009535 - chloroplast thylakoid membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137791.1 light-harvesting complex-like protein OHP1, chloroplastic [Cucumis sativus]7.8e-5899.17Show/hide
Query:  MASSSVILSSLPPARALTCNHQDSRHCLFQIGYSVRANSSRARASFRIQAAAKPPAGVELPKVEPKFQAPFLGFTKTAEIWNSRACMIGLIGIFVVELIL
        MASSSVILSSLPPARALTCNHQDSRHCLFQIGYSVRANSSRAR SFRIQAAAKPPAGVELPKVEPKFQAPFLGFTKTAEIWNSRACMIGLIGIFVVELIL
Subjt:  MASSSVILSSLPPARALTCNHQDSRHCLFQIGYSVRANSSRARASFRIQAAAKPPAGVELPKVEPKFQAPFLGFTKTAEIWNSRACMIGLIGIFVVELIL

Query:  NKGILQVIGVDVGKGLDLPL
        NKGILQVIGVDVGKGLDLPL
Subjt:  NKGILQVIGVDVGKGLDLPL

XP_008442523.1 PREDICTED: high-light-induced protein, chloroplastic [Cucumis melo]1.6e-5090.83Show/hide
Query:  MASSSVILSSLPPARALTCNHQDSRHCLFQIGYSVRANSSRARASFRIQAAAKPPAGVELPKVEPKFQAPFLGFTKTAEIWNSRACMIGLIGIFVVELIL
        MASSSVILSSLPPARALT N QD RH LFQIG SVRAN+SRAR SFR+QAAAKPPAGVELPKVEPKF+APFLGFTKTAEIWNSRACMIGLIG FVVELIL
Subjt:  MASSSVILSSLPPARALTCNHQDSRHCLFQIGYSVRANSSRARASFRIQAAAKPPAGVELPKVEPKFQAPFLGFTKTAEIWNSRACMIGLIGIFVVELIL

Query:  NKGILQVIGVDVGKGLDLPL
        NK ILQVIGVDVGKGLDLPL
Subjt:  NKGILQVIGVDVGKGLDLPL

XP_022145630.1 light-harvesting complex-like protein OHP1, chloroplastic [Momordica charantia]7.9e-4282.64Show/hide
Query:  MASSSVIL-SSLPPARALTCNHQDSRHCLFQIGYSVRANSSRARASFRIQAAAKPPAGVELPKVEPKFQAPFLGFTKTAEIWNSRACMIGLIGIFVVELI
        MASSS +L SSL PARA T N QD R CLFQIG SVRAN+SRAR  FR+Q AAK PAGVELPKVEPKF+APFLGFTKTAEIWNSRACM+GL+GIF+VELI
Subjt:  MASSSVIL-SSLPPARALTCNHQDSRHCLFQIGYSVRANSSRARASFRIQAAAKPPAGVELPKVEPKFQAPFLGFTKTAEIWNSRACMIGLIGIFVVELI

Query:  LNKGILQVIGVDVGKGLDLPL
        L+KGILQVIGVDVGKGLDLPL
Subjt:  LNKGILQVIGVDVGKGLDLPL

XP_022934608.1 light-harvesting complex-like protein OHP1, chloroplastic [Cucurbita moschata]2.1e-4282.64Show/hide
Query:  MASSSVIL-SSLPPARALTCNHQDSRHCLFQIGYSVRANSSRARASFRIQAAAKPPAGVELPKVEPKFQAPFLGFTKTAEIWNSRACMIGLIGIFVVELI
        MASS+ IL SSL PARA  C+ QD R CLFQ+G SVRAN+ RARA FR+Q AAKPPAGVELPKV+PKF+APFLGFTKTAEIWNSRA MIGLIGIFVVELI
Subjt:  MASSSVIL-SSLPPARALTCNHQDSRHCLFQIGYSVRANSSRARASFRIQAAAKPPAGVELPKVEPKFQAPFLGFTKTAEIWNSRACMIGLIGIFVVELI

Query:  LNKGILQVIGVDVGKGLDLPL
        LNKGILQVIGVD+GKGLDLPL
Subjt:  LNKGILQVIGVDVGKGLDLPL

XP_038905156.1 light-harvesting complex-like protein OHP1, chloroplastic [Benincasa hispida]3.8e-4485.12Show/hide
Query:  MASSSVIL-SSLPPARALTCNHQDSRHCLFQIGYSVRANSSRARASFRIQAAAKPPAGVELPKVEPKFQAPFLGFTKTAEIWNSRACMIGLIGIFVVELI
        MASSS IL SSL PARA  C+ QD R CLFQIG SVRAN+SR+R  FR+Q AAKPPAGVELPKVEPKF+APFLGFTKTAE+WNSRACMIGLIGIFVVELI
Subjt:  MASSSVIL-SSLPPARALTCNHQDSRHCLFQIGYSVRANSSRARASFRIQAAAKPPAGVELPKVEPKFQAPFLGFTKTAEIWNSRACMIGLIGIFVVELI

Query:  LNKGILQVIGVDVGKGLDLPL
        LNKGILQVIGVDVGKGLDLPL
Subjt:  LNKGILQVIGVDVGKGLDLPL

TrEMBL top hitse value%identityAlignment
A0A0A0LAI0 Uncharacterized protein3.8e-5899.17Show/hide
Query:  MASSSVILSSLPPARALTCNHQDSRHCLFQIGYSVRANSSRARASFRIQAAAKPPAGVELPKVEPKFQAPFLGFTKTAEIWNSRACMIGLIGIFVVELIL
        MASSSVILSSLPPARALTCNHQDSRHCLFQIGYSVRANSSRAR SFRIQAAAKPPAGVELPKVEPKFQAPFLGFTKTAEIWNSRACMIGLIGIFVVELIL
Subjt:  MASSSVILSSLPPARALTCNHQDSRHCLFQIGYSVRANSSRARASFRIQAAAKPPAGVELPKVEPKFQAPFLGFTKTAEIWNSRACMIGLIGIFVVELIL

Query:  NKGILQVIGVDVGKGLDLPL
        NKGILQVIGVDVGKGLDLPL
Subjt:  NKGILQVIGVDVGKGLDLPL

A0A1S3B5V9 high-light-induced protein, chloroplastic7.6e-5190.83Show/hide
Query:  MASSSVILSSLPPARALTCNHQDSRHCLFQIGYSVRANSSRARASFRIQAAAKPPAGVELPKVEPKFQAPFLGFTKTAEIWNSRACMIGLIGIFVVELIL
        MASSSVILSSLPPARALT N QD RH LFQIG SVRAN+SRAR SFR+QAAAKPPAGVELPKVEPKF+APFLGFTKTAEIWNSRACMIGLIG FVVELIL
Subjt:  MASSSVILSSLPPARALTCNHQDSRHCLFQIGYSVRANSSRARASFRIQAAAKPPAGVELPKVEPKFQAPFLGFTKTAEIWNSRACMIGLIGIFVVELIL

Query:  NKGILQVIGVDVGKGLDLPL
        NK ILQVIGVDVGKGLDLPL
Subjt:  NKGILQVIGVDVGKGLDLPL

A0A5A7TRS8 High-light-induced protein7.6e-5190.83Show/hide
Query:  MASSSVILSSLPPARALTCNHQDSRHCLFQIGYSVRANSSRARASFRIQAAAKPPAGVELPKVEPKFQAPFLGFTKTAEIWNSRACMIGLIGIFVVELIL
        MASSSVILSSLPPARALT N QD RH LFQIG SVRAN+SRAR SFR+QAAAKPPAGVELPKVEPKF+APFLGFTKTAEIWNSRACMIGLIG FVVELIL
Subjt:  MASSSVILSSLPPARALTCNHQDSRHCLFQIGYSVRANSSRARASFRIQAAAKPPAGVELPKVEPKFQAPFLGFTKTAEIWNSRACMIGLIGIFVVELIL

Query:  NKGILQVIGVDVGKGLDLPL
        NK ILQVIGVDVGKGLDLPL
Subjt:  NKGILQVIGVDVGKGLDLPL

A0A6J1F851 light-harvesting complex-like protein OHP1, chloroplastic1.0e-4282.64Show/hide
Query:  MASSSVIL-SSLPPARALTCNHQDSRHCLFQIGYSVRANSSRARASFRIQAAAKPPAGVELPKVEPKFQAPFLGFTKTAEIWNSRACMIGLIGIFVVELI
        MASS+ IL SSL PARA  C+ QD R CLFQ+G SVRAN+ RARA FR+Q AAKPPAGVELPKV+PKF+APFLGFTKTAEIWNSRA MIGLIGIFVVELI
Subjt:  MASSSVIL-SSLPPARALTCNHQDSRHCLFQIGYSVRANSSRARASFRIQAAAKPPAGVELPKVEPKFQAPFLGFTKTAEIWNSRACMIGLIGIFVVELI

Query:  LNKGILQVIGVDVGKGLDLPL
        LNKGILQVIGVD+GKGLDLPL
Subjt:  LNKGILQVIGVDVGKGLDLPL

A0A6J1J0W8 light-harvesting complex-like protein OHP1, chloroplastic1.0e-4282.64Show/hide
Query:  MASSSVIL-SSLPPARALTCNHQDSRHCLFQIGYSVRANSSRARASFRIQAAAKPPAGVELPKVEPKFQAPFLGFTKTAEIWNSRACMIGLIGIFVVELI
        MASS+ IL SSL PARA  C+ QD R CLFQ+G SVRAN+ RARA FR+Q AAKPPAGVELPKV+PKF+APFLGFTKTAEIWNSRA MIGLIGIFVVELI
Subjt:  MASSSVIL-SSLPPARALTCNHQDSRHCLFQIGYSVRANSSRARASFRIQAAAKPPAGVELPKVEPKFQAPFLGFTKTAEIWNSRACMIGLIGIFVVELI

Query:  LNKGILQVIGVDVGKGLDLPL
        LNKGILQVIGVD+GKGLDLPL
Subjt:  LNKGILQVIGVDVGKGLDLPL

SwissProt top hitse value%identityAlignment
O81208 Light-harvesting complex-like protein OHP1, chloroplastic4.5e-2477.14Show/hide
Query:  AAKPPAGVELPKVEPKFQAPFLGFTKTAEIWNSRACMIGLIGIFVVELILNKGILQVIGVDVGKGLDLPL
        AAK P GV +PK +PK Q  FLGFT+TAEIWNSRACMIGLIG F+VELILNKGIL++IGV++GKGLDLPL
Subjt:  AAKPPAGVELPKVEPKFQAPFLGFTKTAEIWNSRACMIGLIGIFVVELILNKGILQVIGVDVGKGLDLPL

Arabidopsis top hitse value%identityAlignment
AT5G02120.1 one helix protein3.2e-2577.14Show/hide
Query:  AAKPPAGVELPKVEPKFQAPFLGFTKTAEIWNSRACMIGLIGIFVVELILNKGILQVIGVDVGKGLDLPL
        AAK P GV +PK +PK Q  FLGFT+TAEIWNSRACMIGLIG F+VELILNKGIL++IGV++GKGLDLPL
Subjt:  AAKPPAGVELPKVEPKFQAPFLGFTKTAEIWNSRACMIGLIGIFVVELILNKGILQVIGVDVGKGLDLPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCTCCTCTGTGATTTTATCTTCTCTTCCTCCGGCCAGAGCTCTGACTTGTAACCATCAAGACAGTCGCCACTGTCTCTTTCAAATTGGGTATTCCGTCCGTGC
CAATAGCAGCAGGGCTCGTGCCTCTTTCAGGATTCAGGCCGCCGCAAAGCCTCCGGCTGGAGTTGAATTGCCAAAAGTAGAGCCGAAATTTCAAGCCCCGTTTCTTGGAT
TCACTAAAACTGCTGAAATCTGGAATTCTAGAGCCTGCATGATAGGCCTTATTGGGATTTTCGTAGTGGAGCTGATATTGAACAAGGGTATACTTCAGGTGATTGGAGTT
GATGTTGGGAAAGGCCTGGATCTTCCTCTTTGA
mRNA sequenceShow/hide mRNA sequence
CCAAATCCTCAAGATCTAATAGGACCAACCCTCCAGCCTAGCATTTAATTCTAAGGTGGAAAAAAGTAGTTACGGAAAGAAAAATTGAAGAGGGAAAGTTCTGATAACGT
TACCGAAGCAGTGGTTGTGGTTGTGTTTGGAGCATTTCCAAATAATGGCGTCCTCCTCTGTGATTTTATCTTCTCTTCCTCCGGCCAGAGCTCTGACTTGTAACCATCAA
GACAGTCGCCACTGTCTCTTTCAAATTGGGTATTCCGTCCGTGCCAATAGCAGCAGGGCTCGTGCCTCTTTCAGGATTCAGGCCGCCGCAAAGCCTCCGGCTGGAGTTGA
ATTGCCAAAAGTAGAGCCGAAATTTCAAGCCCCGTTTCTTGGATTCACTAAAACTGCTGAAATCTGGAATTCTAGAGCCTGCATGATAGGCCTTATTGGGATTTTCGTAG
TGGAGCTGATATTGAACAAGGGTATACTTCAGGTGATTGGAGTTGATGTTGGGAAAGGCCTGGATCTTCCTCTTTGATTCCCAGAAAAGTTTTAAACATCTTGAGATCTC
CTTTGTGTCTTTTTATTGAAAAAAGAAAAACAATGAAAATTGTAACTGTACCACACGACTTTCAACTGTATCAGAGAATTCTACAATCTTCAAGTTCTTGTACTTCATAA
GTAATTTACATAACATTGTCACCGTTCAAAATATGCCACTCTCTTGAGTTCTGTAATGATACCTAATAACCAGAACTCGAGAATATTGCAAATTAAATAAGCCTACAGAT
TCGAGTATCAATAACAGGCACCTTGGATGGAGGTTGTCCTATGTCTAGTACTTCTTCCAATGATATCCTGCGATTCCTCCAAGCACCTCTTACCCAGCTCCTCACTATCT
GTGCTTCAGGCTTTCTATTCTTTTGGACGTCAAGAATCTCCGCATACGCTTCTACAGAAGTAATCAATGATATCAATGAATAATGATGCTCAGACCACCACGTTTATGAA
AGGTTAACATGCCTATTTTGCTATAACATGTGATTTTAGGAGAGAGTTTAACCATAATCAGGGTGCGATTTGATCAGTTCATCTGGGTTTCATTTAACATTTAAGAGAGC
AACCCAAAGCTATCCAACGTTTAACAACCACAACTCTCGCAATGAACATTTCGATCTCATGCAGTGATTTGTTTGTTATTTTTTCAAGCCTCGAGCTAAACGCTTAGAAT
CACTAAAATGCTTGATCAATACCTCCAGCTATTGCTGCTATGTCAC
Protein sequenceShow/hide protein sequence
MASSSVILSSLPPARALTCNHQDSRHCLFQIGYSVRANSSRARASFRIQAAAKPPAGVELPKVEPKFQAPFLGFTKTAEIWNSRACMIGLIGIFVVELILNKGILQVIGV
DVGKGLDLPL