; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G32460 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G32460
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr3:28968391..28969036
RNA-Seq ExpressionCSPI03G32460
SyntenyCSPI03G32460
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044076.1 hypothetical protein E6C27_scaffold236G004240 [Cucumis melo var. makuwa]7.1e-2380.49Show/hide
Query:  MSQRPSRHQRRPSQGVFMPADYLSDPPPP--VGPGSTVESGGPHSSTLLTRPTQQSRSADPVAARPPAPPAVANNDAPNPAS
        MSQRP RHQRRPSQGVFM ADYLS+PPPP  +GPGSTVESGGPHS+ LLTRP QQSR+ADPVA RPPAP A   NDA NPAS
Subjt:  MSQRPSRHQRRPSQGVFMPADYLSDPPPP--VGPGSTVESGGPHSSTLLTRPTQQSRSADPVAARPPAPPAVANNDAPNPAS
KAG6580559.1 hypothetical protein SDJN03_20561, partial [Cucurbita argyrosperma subsp. sororia]2.9e-1666.25Show/hide
Query:  MSQRPSRHQRRPSQGVFMPADYLSDPPPPVGPGSTVESGGPHSSTLLTRPTQQSRSADPVAARPPAPPAVANNDAPNPAS
        MSQR  RHQRRPSQ VF+ ADYLS+PP   GPGS VE  GPHS+  L RP QQSR+ADP A RPPAP   A+N+APNP +
Subjt:  MSQRPSRHQRRPSQGVFMPADYLSDPPPPVGPGSTVESGGPHSSTLLTRPTQQSRSADPVAARPPAPPAVANNDAPNPAS
KAG6596419.1 hypothetical protein SDJN03_09599, partial [Cucurbita argyrosperma subsp. sororia]1.0e-1670Show/hide
Query:  MSQRPSRHQRRPSQGVFMPADYLSDPPPPVGPGSTVESGGPHSSTLLTRPTQQSRSADPVAARPPAPPAVANNDAPNPAS
        MSQR  RHQRRPSQGVFM ADYLS+PPPP GP   VES  P SS  L+RP  QSR ADP AARPPAP    +N+APNPAS
Subjt:  MSQRPSRHQRRPSQGVFMPADYLSDPPPPVGPGSTVESGGPHSSTLLTRPTQQSRSADPVAARPPAPPAVANNDAPNPAS
KGN58888.1 hypothetical protein Csa_002334 [Cucumis sativus]3.6e-35100Show/hide
Query:  MSQRPSRHQRRPSQGVFMPADYLSDPPPPVGPGSTVESGGPHSSTLLTRPTQQSRSADPVAARPPAPPAVANNDAPNPAS
        MSQRPSRHQRRPSQGVFMPADYLSDPPPPVGPGSTVESGGPHSSTLLTRPTQQSRSADPVAARPPAPPAVANNDAPNPAS
Subjt:  MSQRPSRHQRRPSQGVFMPADYLSDPPPPVGPGSTVESGGPHSSTLLTRPTQQSRSADPVAARPPAPPAVANNDAPNPAS
TrEMBL top hitse value%identityAlignment
A0A0A0LAM0 Uncharacterized protein1.8e-35100Show/hide
Query:  MSQRPSRHQRRPSQGVFMPADYLSDPPPPVGPGSTVESGGPHSSTLLTRPTQQSRSADPVAARPPAPPAVANNDAPNPAS
        MSQRPSRHQRRPSQGVFMPADYLSDPPPPVGPGSTVESGGPHSSTLLTRPTQQSRSADPVAARPPAPPAVANNDAPNPAS
Subjt:  MSQRPSRHQRRPSQGVFMPADYLSDPPPPVGPGSTVESGGPHSSTLLTRPTQQSRSADPVAARPPAPPAVANNDAPNPAS
A0A5A7TPQ1 Uncharacterized protein3.5e-2380.49Show/hide
Query:  MSQRPSRHQRRPSQGVFMPADYLSDPPPP--VGPGSTVESGGPHSSTLLTRPTQQSRSADPVAARPPAPPAVANNDAPNPAS
        MSQRP RHQRRPSQGVFM ADYLS+PPPP  +GPGSTVESGGPHS+ LLTRP QQSR+ADPVA RPPAP A   NDA NPAS
Subjt:  MSQRPSRHQRRPSQGVFMPADYLSDPPPP--VGPGSTVESGGPHSSTLLTRPTQQSRSADPVAARPPAPPAVANNDAPNPAS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCAGCGACCCAGCAGGCACCAGAGGAGGCCTTCGCAGGGCGTTTTCATGCCCGCCGATTACCTCTCCGACCCCCCACCGCCAGTTGGACCGGGATCGACGGTCGA
ATCTGGTGGTCCGCACTCGAGTACTCTTCTCACTCGACCAACGCAGCAGAGCCGCAGCGCTGATCCGGTAGCCGCAAGGCCTCCTGCTCCGCCGGCGGTGGCCAATAATG
ATGCTCCGAATCCGGCGAGCTAG
mRNA sequenceShow/hide mRNA sequence
TGGCATTATAAGTTTGACTCGCTTAGATCGAGAAGTCATCAAACAAACCAAACTAAAACGTATAGAAAAAGAGAAAAGAAAAGAAAAGAAAAAGCAGTCAACTCTACCGT
TACGCCGGCGAACTCTCACTATTTCTCTCTCTGTTTCCGCCCCTTTGTTCTTCTCCATTCCCAAATCTCACCGTAAAATGTCGCAGCGACCCAGCAGGCACCAGAGGAGG
CCTTCGCAGGGCGTTTTCATGCCCGCCGATTACCTCTCCGACCCCCCACCGCCAGTTGGACCGGGATCGACGGTCGAATCTGGTGGTCCGCACTCGAGTACTCTTCTCAC
TCGACCAACGCAGCAGAGCCGCAGCGCTGATCCGGTAGCCGCAAGGCCTCCTGCTCCGCCGGCGGTGGCCAATAATGATGCTCCGAATCCGGCGAGCTAGCGGCACCAGA
GACTCGACGATGTCGTTTCGTTCGATTGCATTATGGAGATTATGTGGAATCAGGTTTTCGTTTTCGATCTGTCGTTTCGTTCCTTTTTTTAATTTGCTGCTAAATCTCAG
CTTTCCTTTGTGAATTTAAAAAAAGAAGAAGAAGAAGAAGAAAAATAATATCTCAGTTTCTTTTTTCATTTTCTGACTATTTTTCTTCGGTTCATG
Protein sequenceShow/hide protein sequence
MSQRPSRHQRRPSQGVFMPADYLSDPPPPVGPGSTVESGGPHSSTLLTRPTQQSRSADPVAARPPAPPAVANNDAPNPAS