; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G33790 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G33790
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRibonuclease T(2)
Genome locationChr3:29700007..29700699
RNA-Seq ExpressionCSPI03G33790
SyntenyCSPI03G33790
Gene Ontology termsGO:0016070 - RNA metabolic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0033897 - ribonuclease T2 activity (molecular function)
InterPro domainsIPR001568 - Ribonuclease T2-like
IPR033130 - Ribonuclease T2, His active site 2
IPR036430 - Ribonuclease T2-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651058.1 hypothetical protein Csa_002465 [Cucumis sativus]3.1e-7497.83Show/hide
Query:  QVISLEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSDPPFSLFQYFQISLNLLRKFDLLTILKAAGLNPQTSQNLGIQNIMAPIQRTTKKYPGIRCNKNV
        +VISLEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSDPPFSLFQYFQISLNLLRKFDLLTILKAAGLNPQTSQNL IQNIMAPIQRTTKKYPGIRCNKNV
Subjt:  QVISLEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSDPPFSLFQYFQISLNLLRKFDLLTILKAAGLNPQTSQNLGIQNIMAPIQRTTKKYPGIRCNKNV

Query:  KTGKSQLNEIVLCLEKDGATLIDCPTFVSSTCAKSFVW
        KTGKSQLNEIVLCLEKDGATLIDCPTFVS+TCAKSFVW
Subjt:  KTGKSQLNEIVLCLEKDGATLIDCPTFVSSTCAKSFVW

KAG6581688.1 hypothetical protein SDJN03_21690, partial [Cucurbita argyrosperma subsp. sororia]8.2e-3544.94Show/hide
Query:  SGGRMYVIP-VLVSLHVILRLKPSSLFMAC-------GQVISLEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSDPPFSLFQYFQISLNLL--RKFDLLT
        SG R Y  P  + ++H +     S++ + C        Q+ +L  QLN  WPD+  GNN +FW HEWD+HG CSDPPF+  QYFQ +LN+     +DLL 
Subjt:  SGGRMYVIP-VLVSLHVILRLKPSSLFMAC-------GQVISLEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSDPPFSLFQYFQISLNLL--RKFDLLT

Query:  ILKAAGLNPQTSQNLGIQNIMAPIQRTTKKYPGIRCNKNVKTGKSQLNEIVLCLEKDGATLIDCPTFVSSTCAKSFVW
        IL  AGL P  +       I   IQ  T K PG+RCNKN ++ K QL EI+LC +K+G TLIDC  F   TC   FVW
Subjt:  ILKAAGLNPQTSQNLGIQNIMAPIQRTTKKYPGIRCNKNVKTGKSQLNEIVLCLEKDGATLIDCPTFVSSTCAKSFVW

XP_022932791.1 ribonuclease MC-like [Cucurbita moschata]6.3e-3544.94Show/hide
Query:  SGGRMYV-IPVLVSLHVILRLKPSSLFMAC-------GQVISLEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSDPPFSLFQYFQISLNLL--RKFDLLT
        SG R Y   P + ++H +     S++ + C        Q+ +L  QLN  WPD+  GNN +FW HEWD+HG CSDPPF+  QYFQ +LN+     +DLL 
Subjt:  SGGRMYV-IPVLVSLHVILRLKPSSLFMAC-------GQVISLEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSDPPFSLFQYFQISLNLL--RKFDLLT

Query:  ILKAAGLNPQTSQNLGIQNIMAPIQRTTKKYPGIRCNKNVKTGKSQLNEIVLCLEKDGATLIDCPTFVSSTCAKSFVW
        IL  AGL P  +       I   IQ  T K PG+RCNKN ++ K QL EI+LC +K+G TLIDC  F   TC   FVW
Subjt:  ILKAAGLNPQTSQNLGIQNIMAPIQRTTKKYPGIRCNKNVKTGKSQLNEIVLCLEKDGATLIDCPTFVSSTCAKSFVW

XP_031738547.1 ribonuclease MC-like [Cucumis sativus]6.4e-6486.23Show/hide
Query:  QVISLEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSDPPFSLFQYFQISLNLLRKFDLLTILKAAGLNPQTSQNLGIQNIMAPIQRTTKKYPGIRCNKNV
        +V+ LE QLNISWPDLK G N++FW HEW+ HGKCSDPPFSLFQYFQ+SLNLL+KFD+L ILKAAGLNPQTSQN+GIQNIM PIQRTTKKYPGIRC KNV
Subjt:  QVISLEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSDPPFSLFQYFQISLNLLRKFDLLTILKAAGLNPQTSQNLGIQNIMAPIQRTTKKYPGIRCNKNV

Query:  KTGKSQLNEIVLCLEKDGATLIDCPTFVSSTCAKSFVW
        KTGKSQLNEIVLCLEKDGATLIDCPTFVSSTCAKS VW
Subjt:  KTGKSQLNEIVLCLEKDGATLIDCPTFVSSTCAKSFVW

XP_031738690.1 ribonuclease MC-like [Cucumis sativus]3.1e-7497.83Show/hide
Query:  QVISLEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSDPPFSLFQYFQISLNLLRKFDLLTILKAAGLNPQTSQNLGIQNIMAPIQRTTKKYPGIRCNKNV
        +VISLEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSDPPFSLFQYFQISLNLLRKFDLLTILKAAGLNPQTSQNL IQNIMAPIQRTTKKYPGIRCNKNV
Subjt:  QVISLEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSDPPFSLFQYFQISLNLLRKFDLLTILKAAGLNPQTSQNLGIQNIMAPIQRTTKKYPGIRCNKNV

Query:  KTGKSQLNEIVLCLEKDGATLIDCPTFVSSTCAKSFVW
        KTGKSQLNEIVLCLEKDGATLIDCPTFVS+TCAKSFVW
Subjt:  KTGKSQLNEIVLCLEKDGATLIDCPTFVSSTCAKSFVW

TrEMBL top hitse value%identityAlignment
A0A0A0LAB0 Ribonuclease T(2)2.6e-3454.55Show/hide
Query:  GQVISLEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSDPPFSLFQYFQISL--NLLRKFDLLTILKAAGLNPQTSQNLGIQNIMAPIQRTTKKYPGIRCN
        G+V SLE  LN  WPD+  G N  FW HEW  H  C DPPF++F YF ISL   + + +DLLTIL  AGL+ QT ++L  QN++ PI+  T   PGIRCN
Subjt:  GQVISLEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSDPPFSLFQYFQISL--NLLRKFDLLTILKAAGLNPQTSQNLGIQNIMAPIQRTTKKYPGIRCN

Query:  KNVKTGKSQLNEIVLCLEKDGATLIDCPTFVSSTCAK--SFVW
         N  T K QL EIVLC   DG TLIDCP+FVS+TC     FVW
Subjt:  KNVKTGKSQLNEIVLCLEKDGATLIDCPTFVSSTCAK--SFVW

A0A0A0LAN6 Ribonuclease T(2)1.5e-7497.83Show/hide
Query:  QVISLEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSDPPFSLFQYFQISLNLLRKFDLLTILKAAGLNPQTSQNLGIQNIMAPIQRTTKKYPGIRCNKNV
        +VISLEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSDPPFSLFQYFQISLNLLRKFDLLTILKAAGLNPQTSQNL IQNIMAPIQRTTKKYPGIRCNKNV
Subjt:  QVISLEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSDPPFSLFQYFQISLNLLRKFDLLTILKAAGLNPQTSQNLGIQNIMAPIQRTTKKYPGIRCNKNV

Query:  KTGKSQLNEIVLCLEKDGATLIDCPTFVSSTCAKSFVW
        KTGKSQLNEIVLCLEKDGATLIDCPTFVS+TCAKSFVW
Subjt:  KTGKSQLNEIVLCLEKDGATLIDCPTFVSSTCAKSFVW

A0A6J1EXD5 Ribonuclease T(2)3.0e-3544.94Show/hide
Query:  SGGRMYV-IPVLVSLHVILRLKPSSLFMAC-------GQVISLEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSDPPFSLFQYFQISLNLL--RKFDLLT
        SG R Y   P + ++H +     S++ + C        Q+ +L  QLN  WPD+  GNN +FW HEWD+HG CSDPPF+  QYFQ +LN+     +DLL 
Subjt:  SGGRMYV-IPVLVSLHVILRLKPSSLFMAC-------GQVISLEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSDPPFSLFQYFQISLNLL--RKFDLLT

Query:  ILKAAGLNPQTSQNLGIQNIMAPIQRTTKKYPGIRCNKNVKTGKSQLNEIVLCLEKDGATLIDCPTFVSSTCAKSFVW
        IL  AGL P  +       I   IQ  T K PG+RCNKN ++ K QL EI+LC +K+G TLIDC  F   TC   FVW
Subjt:  ILKAAGLNPQTSQNLGIQNIMAPIQRTTKKYPGIRCNKNVKTGKSQLNEIVLCLEKDGATLIDCPTFVSSTCAKSFVW

A0A6J1F837 Ribonuclease T(2)2.2e-3345.29Show/hide
Query:  PVLVSLHVILRLKPSSLFMACG-------QVISLEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSDPPFSLFQYFQISLNLL--RKFDLLTILKAAGLNP
        P + ++H +     S+  + C        Q+ +L  QLN  WPD+  G N +FW HEWD HG CS+PPF+  QYFQI+LN+     +DLLTIL AAGL P
Subjt:  PVLVSLHVILRLKPSSLFMACG-------QVISLEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSDPPFSLFQYFQISLNLL--RKFDLLTILKAAGLNP

Query:  QTSQNLGIQNIMAPIQRTTKKYPGIRCNKNVKT-GKSQLNEIVLCLEKDGATLIDCPTFVSSTCAKSFVW
          +     ++I   IQ  T K PG+RCN N ++  K QL EI+LC +KDG TLIDC  F   TC   FVW
Subjt:  QTSQNLGIQNIMAPIQRTTKKYPGIRCNKNVKT-GKSQLNEIVLCLEKDGATLIDCPTFVSSTCAKSFVW

A0A6J1IAR7 Ribonuclease T(2)4.0e-3544.94Show/hide
Query:  SGGRMYV-IPVLVSLHVILRLKPSSLFMAC-------GQVISLEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSDPPFSLFQYFQISLNLL--RKFDLLT
        SG R Y   P + ++H +     S++   C        Q+ +LE QLN  WPD+  GNN +FW HEWD HG CSDPPF+  QYFQ +LN+     +DLL 
Subjt:  SGGRMYV-IPVLVSLHVILRLKPSSLFMAC-------GQVISLEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSDPPFSLFQYFQISLNLL--RKFDLLT

Query:  ILKAAGLNPQTSQNLGIQNIMAPIQRTTKKYPGIRCNKNVKTGKSQLNEIVLCLEKDGATLIDCPTFVSSTCAKSFVW
        IL  AGL P  +     Q I   IQ  T K PG+RCNKN ++ + QL EI+LC +K+G TLI+C  F   TC   FVW
Subjt:  ILKAAGLNPQTSQNLGIQNIMAPIQRTTKKYPGIRCNKNVKTGKSQLNEIVLCLEKDGATLIDCPTFVSSTCAKSFVW

SwissProt top hitse value%identityAlignment
P23540 Ribonuclease MC4.1e-2134.29Show/hide
Query:  QVISLEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSDPPFSLFQYFQISLNLLRKFDLLTILK--AAGLNPQTSQNLGIQNIMAPIQRTTKKYPGIRCNK
        ++  L+ QLN  WP++   NN +FW HEW  HG CS+  F+   YF++++++   +D++  L+  AAG N +T     I+     ++    K+PG+RC  
Subjt:  QVISLEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSDPPFSLFQYFQISLNLLRKFDLLTILK--AAGLNPQTSQNLGIQNIMAPIQRTTKKYPGIRCNK

Query:  NVKTGKSQLNEIVLCLEKDGATLIDCPTFVSSTCAKSFVW
        + +T  S L ++V C  +DG+TLIDC      TC  +F++
Subjt:  NVKTGKSQLNEIVLCLEKDGATLIDCPTFVSSTCAKSFVW

P42813 Ribonuclease 11.1e-1837.4Show/hide
Query:  SWPDL--KYGNNDKFWGHEWDTHGKCSDPPFSLFQYFQISLNLLRKFDLLTILKAAGLNPQTSQNLGIQNIMAPIQRTTKKYPGIRCNKNVKTGKSQLNE
        SWP L    G+ + FW HEW+ HG CS+      +YFQ +LNL +K +LL  L  AG+NP   ++  +++I   I+ +    P + CN++  +G SQL +
Subjt:  SWPDL--KYGNNDKFWGHEWDTHGKCSDPPFSLFQYFQISLNLLRKFDLLTILKAAGLNPQTSQNLGIQNIMAPIQRTTKKYPGIRCNKNVKTGKSQLNE

Query:  IVLCLEKDGATLIDCPTFVSSTC
        + LC+++ G+ LI+CP F    C
Subjt:  IVLCLEKDGATLIDCPTFVSSTC

P42815 Ribonuclease 31.5e-1534.33Show/hide
Query:  QVISLEGQLNISWPDLKYGNND--KFWGHEWDTHGKCSDPPFSLFQYFQISLNLLRKFDLLTILKAAGLNPQTSQNLGIQNIMAPIQRTTKKYPGIRCNK
        +V  L   L   WP L   +ND  KFW HEW+ HG C++       YF+  L L +K +LL  L  AG+ P   +   +++I   I++     PGI CNK
Subjt:  QVISLEGQLNISWPDLKYGNND--KFWGHEWDTHGKCSDPPFSLFQYFQISLNLLRKFDLLTILKAAGLNPQTSQNLGIQNIMAPIQRTTKKYPGIRCNK

Query:  NVKTGKSQLNEIVLCLEKDGATLIDCPTFVSSTC
        +  +  SQL +I LC++   +  I+CP      C
Subjt:  NVKTGKSQLNEIVLCLEKDGATLIDCPTFVSSTC

P80022 Extracellular ribonuclease LE1.8e-1632.61Show/hide
Query:  QVISLEGQLNISWPDL--KYGNNDKFWGHEWDTHGKCSDPPF-SLFQYFQISLNLLRKFDLLTILKAAGLNPQTSQNLGIQNIMAPIQRTTKKYPGIRCN
        Q+  L   +  +WP L    G+   FW HEW+ HG C++    +   YF+ +L+L  + DLL+IL+ A ++P   ++  + NI   I+      P I+CN
Subjt:  QVISLEGQLNISWPDL--KYGNNDKFWGHEWDTHGKCSDPPF-SLFQYFQISLNLLRKFDLLTILKAAGLNPQTSQNLGIQNIMAPIQRTTKKYPGIRCN

Query:  KNVKTGKSQLNEIVLCLEKDGATLIDCPTFVSSTCAKS
         + ++G SQL ++ +C++  G++LI+CP F    C  S
Subjt:  KNVKTGKSQLNEIVLCLEKDGATLIDCPTFVSSTCAKS

Q38717 Ribonuclease S-41.5e-1534.4Show/hide
Query:  LEGQLNISWPDLKY----GNNDKFWGHEWDTHGKCSDPPFSLFQYFQISLNLLRKFDLLTILKAAGLNPQTSQNLGIQNIMAPIQRTTKKYPGIRCNKNV
        +E ++  SWPDLK     G +  FW  +W  HG C  PP     YF  +L L  + D+LTIL+    NP T Q   +  +   I R   K P ++C    
Subjt:  LEGQLNISWPDLKY----GNNDKFWGHEWDTHGKCSDPPFSLFQYFQISLNLLRKFDLLTILKAAGLNPQTSQNLGIQNIMAPIQRTTKKYPGIRCNKNV

Query:  KTGKSQLNEIVLCLEKDGATLIDCP
           +S L E+V+C++ +GA+++ CP
Subjt:  KTGKSQLNEIVLCLEKDGATLIDCP

Arabidopsis top hitse value%identityAlignment
AT1G14220.1 Ribonuclease T2 family protein5.7e-1834.33Show/hide
Query:  QVISLEGQLNISWPDLKYGNND--KFWGHEWDTHGKCSDPPFSLFQYFQISLNLLRKFDLLTILKAAGLNPQTSQNLGIQNIMAPIQRTTKKYPGIRCNK
        Q+  L   L  +WP L   +N+   FW HEW+ HG CS+      +YF+ +L L +K +LL ILK +G+NP       +  I   I+      PGI CNK
Subjt:  QVISLEGQLNISWPDLKYGNND--KFWGHEWDTHGKCSDPPFSLFQYFQISLNLLRKFDLLTILKAAGLNPQTSQNLGIQNIMAPIQRTTKKYPGIRCNK

Query:  NVKTGKSQLNEIVLCLEKDGATLIDCPTFVSSTC
        + +   +QL++I +C++  G   I+CP     +C
Subjt:  NVKTGKSQLNEIVLCLEKDGATLIDCPTFVSSTC

AT1G26820.1 ribonuclease 31.1e-1634.33Show/hide
Query:  QVISLEGQLNISWPDLKYGNND--KFWGHEWDTHGKCSDPPFSLFQYFQISLNLLRKFDLLTILKAAGLNPQTSQNLGIQNIMAPIQRTTKKYPGIRCNK
        +V  L   L   WP L   +ND  KFW HEW+ HG C++       YF+  L L +K +LL  L  AG+ P   +   +++I   I++     PGI CNK
Subjt:  QVISLEGQLNISWPDLKYGNND--KFWGHEWDTHGKCSDPPFSLFQYFQISLNLLRKFDLLTILKAAGLNPQTSQNLGIQNIMAPIQRTTKKYPGIRCNK

Query:  NVKTGKSQLNEIVLCLEKDGATLIDCPTFVSSTC
        +  +  SQL +I LC++   +  I+CP      C
Subjt:  NVKTGKSQLNEIVLCLEKDGATLIDCPTFVSSTC

AT2G02990.1 ribonuclease 17.9e-2037.4Show/hide
Query:  SWPDL--KYGNNDKFWGHEWDTHGKCSDPPFSLFQYFQISLNLLRKFDLLTILKAAGLNPQTSQNLGIQNIMAPIQRTTKKYPGIRCNKNVKTGKSQLNE
        SWP L    G+ + FW HEW+ HG CS+      +YFQ +LNL +K +LL  L  AG+NP   ++  +++I   I+ +    P + CN++  +G SQL +
Subjt:  SWPDL--KYGNNDKFWGHEWDTHGKCSDPPFSLFQYFQISLNLLRKFDLLTILKAAGLNPQTSQNLGIQNIMAPIQRTTKKYPGIRCNKNVKTGKSQLNE

Query:  IVLCLEKDGATLIDCPTFVSSTC
        + LC+++ G+ LI+CP F    C
Subjt:  IVLCLEKDGATLIDCPTFVSSTC

AT2G39780.1 ribonuclease 26.7e-1130.4Show/hide
Query:  QVISLEGQLNISWPDLKYGN-------NDKFWGHEWDTHGKCSDPPF-SLFQYFQISLNLLRKFDLLTILKAAGLNPQTSQNLGIQNIMAPIQRTTKKYP
        ++ +L   L   WP L  G+          FWGHEW+ HG CS P F   + YF  +LNL  K ++  +L  AG     S+   +  I+  IQ      P
Subjt:  QVISLEGQLNISWPDLKYGN-------NDKFWGHEWDTHGKCSDPPF-SLFQYFQISLNLLRKFDLLTILKAAGLNPQTSQNLGIQNIMAPIQRTTKKYP

Query:  GIRCNKNVKTGKSQLNEIVLCLEKD
         + C ++       ++EI +C  KD
Subjt:  GIRCNKNVKTGKSQLNEIVLCLEKD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCGTTCCATTTGAGTTCTTCCAATTCGTGGAACAGTGGGGGCCGAATGTATGTAATACCGGTGCTCGTGTCTCTCCATGTCATACTCCGCCTCAAGCCAAGTTC
ACTATTCATGGCTTGTGGCCAAGTTATATCACTTGAAGGACAACTGAATATATCTTGGCCAGATTTAAAATATGGAAATAACGATAAATTTTGGGGTCATGAATGGGACA
CTCATGGGAAATGTTCAGATCCTCCTTTTAGCTTATTTCAATATTTCCAAATTTCTTTGAATCTCCTACGAAAATTTGATCTATTGACAATCTTAAAGGCTGCTGGGCTC
AACCCTCAAACCTCCCAAAACCTTGGAATCCAAAACATCATGGCCCCTATTCAAAGGACAACAAAAAAGTATCCTGGAATCCGCTGCAACAAAAATGTTAAAACTGGCAA
GTCGCAGTTGAATGAAATTGTATTGTGTTTGGAAAAAGATGGTGCTACCCTCATCGACTGTCCTACATTTGTTAGTAGCACTTGTGCAAAATCATTTGTATGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCGTTCCATTTGAGTTCTTCCAATTCGTGGAACAGTGGGGGCCGAATGTATGTAATACCGGTGCTCGTGTCTCTCCATGTCATACTCCGCCTCAAGCCAAGTTC
ACTATTCATGGCTTGTGGCCAAGTTATATCACTTGAAGGACAACTGAATATATCTTGGCCAGATTTAAAATATGGAAATAACGATAAATTTTGGGGTCATGAATGGGACA
CTCATGGGAAATGTTCAGATCCTCCTTTTAGCTTATTTCAATATTTCCAAATTTCTTTGAATCTCCTACGAAAATTTGATCTATTGACAATCTTAAAGGCTGCTGGGCTC
AACCCTCAAACCTCCCAAAACCTTGGAATCCAAAACATCATGGCCCCTATTCAAAGGACAACAAAAAAGTATCCTGGAATCCGCTGCAACAAAAATGTTAAAACTGGCAA
GTCGCAGTTGAATGAAATTGTATTGTGTTTGGAAAAAGATGGTGCTACCCTCATCGACTGTCCTACATTTGTTAGTAGCACTTGTGCAAAATCATTTGTATGGTAG
Protein sequenceShow/hide protein sequence
MAAFHLSSSNSWNSGGRMYVIPVLVSLHVILRLKPSSLFMACGQVISLEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSDPPFSLFQYFQISLNLLRKFDLLTILKAAGL
NPQTSQNLGIQNIMAPIQRTTKKYPGIRCNKNVKTGKSQLNEIVLCLEKDGATLIDCPTFVSSTCAKSFVW