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CSPI03G33880 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G33880
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr3:29737247..29737528
RNA-Seq ExpressionCSPI03G33880
SyntenyCSPI03G33880
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003724 - RNA helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043949.1 hypothetical protein E6C27_scaffold236G002920 [Cucumis melo var. makuwa]8.6e-1288.1Show/hide
Query:  MDGVDGIWWLRSNYARQIELTEMAKFGAYAAFGSSLRLYVGT
        M+G DGIWWLR+NY R IELTEMAKFGAYAAFGSSLRLYVGT
Subjt:  MDGVDGIWWLRSNYARQIELTEMAKFGAYAAFGSSLRLYVGT
KGN59218.2 hypothetical protein Csa_001496, partial [Cucumis sativus]2.5e-43100Show/hide
Query:  MDGVDGIWWLRSNYARQIELTEMAKFGAYAAFGSSLRLYVGTRSAFPLRLILFLNILINGSHSSTCPVFTALILTSNHERPYSRLLSPHE
        MDGVDGIWWLRSNYARQIELTEMAKFGAYAAFGSSLRLYVGTRSAFPLRLILFLNILINGSHSSTCPVFTALILTSNHERPYSRLLSPHE
Subjt:  MDGVDGIWWLRSNYARQIELTEMAKFGAYAAFGSSLRLYVGTRSAFPLRLILFLNILINGSHSSTCPVFTALILTSNHERPYSRLLSPHE
TrEMBL top hitse value%identityAlignment
A0A0A0LB76 Uncharacterized protein4.9e-45100Show/hide
Query:  MDGVDGIWWLRSNYARQIELTEMAKFGAYAAFGSSLRLYVGTRSAFPLRLILFLNILINGSHSSTCPVFTALILTSNHERPYSRLLSPHEVLA
        MDGVDGIWWLRSNYARQIELTEMAKFGAYAAFGSSLRLYVGTRSAFPLRLILFLNILINGSHSSTCPVFTALILTSNHERPYSRLLSPHEVLA
Subjt:  MDGVDGIWWLRSNYARQIELTEMAKFGAYAAFGSSLRLYVGTRSAFPLRLILFLNILINGSHSSTCPVFTALILTSNHERPYSRLLSPHEVLA
A0A5A7TRW0 Uncharacterized protein4.2e-1288.1Show/hide
Query:  MDGVDGIWWLRSNYARQIELTEMAKFGAYAAFGSSLRLYVGT
        M+G DGIWWLR+NY R IELTEMAKFGAYAAFGSSLRLYVGT
Subjt:  MDGVDGIWWLRSNYARQIELTEMAKFGAYAAFGSSLRLYVGT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGGTGTGGATGGGATTTGGTGGCTTAGGAGTAATTACGCCCGTCAGATTGAATTGACAGAGATGGCAAAGTTTGGCGCTTACGCTGCTTTTGGATCTTCCTTGCG
TCTCTACGTTGGCACCAGGTCGGCCTTTCCTCTACGCTTGATCTTATTCTTAAACATTCTCATCAACGGCTCTCATTCCTCCACGTGTCCTGTATTTACAGCTTTGATCT
TGACGTCGAATCATGAACGTCCATATTCCCGTTTACTTTCCCCACATGAGGTTCTCGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGACGGTGTGGATGGGATTTGGTGGCTTAGGAGTAATTACGCCCGTCAGATTGAATTGACAGAGATGGCAAAGTTTGGCGCTTACGCTGCTTTTGGATCTTCCTTGCG
TCTCTACGTTGGCACCAGGTCGGCCTTTCCTCTACGCTTGATCTTATTCTTAAACATTCTCATCAACGGCTCTCATTCCTCCACGTGTCCTGTATTTACAGCTTTGATCT
TGACGTCGAATCATGAACGTCCATATTCCCGTTTACTTTCCCCACATGAGGTTCTCGCATAA
Protein sequenceShow/hide protein sequence
MDGVDGIWWLRSNYARQIELTEMAKFGAYAAFGSSLRLYVGTRSAFPLRLILFLNILINGSHSSTCPVFTALILTSNHERPYSRLLSPHEVLA