; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G33960 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G33960
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionNIMA-related kinase 4
Genome locationChr3:29793496..29794458
RNA-Seq ExpressionCSPI03G33960
SyntenyCSPI03G33960
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER34891.1 NIMA-related kinase 4 [Striga asiatica]1.4e-0747.47Show/hide
Query:  SSSWSTSFMQGLSTFFSLKQESASSIKCFKLISILLDGLSLISCLSMASMHAPFCTCWITYIARLTPSSSLVKSMAFLEVKSSRRTTPKLYTSLLSVNW
        S S +TSF+ GL   FS +  +A +   F ++S        +S  S+ASM     T  +TYIA+ T S SL KS+A   VKSS +TTPKLYTSLLSVNW
Subjt:  SSSWSTSFMQGLSTFFSLKQESASSIKCFKLISILLDGLSLISCLSMASMHAPFCTCWITYIARLTPSSSLVKSMAFLEVKSSRRTTPKLYTSLLSVNW
TrEMBL top hitse value%identityAlignment
A0A5A7PQL8 NIMA-related kinase 46.7e-0847.47Show/hide
Query:  SSSWSTSFMQGLSTFFSLKQESASSIKCFKLISILLDGLSLISCLSMASMHAPFCTCWITYIARLTPSSSLVKSMAFLEVKSSRRTTPKLYTSLLSVNW
        S S +TSF+ GL   FS +  +A +   F ++S        +S  S+ASM     T  +TYIA+ T S SL KS+A   VKSS +TTPKLYTSLLSVNW
Subjt:  SSSWSTSFMQGLSTFFSLKQESASSIKCFKLISILLDGLSLISCLSMASMHAPFCTCWITYIARLTPSSSLVKSMAFLEVKSSRRTTPKLYTSLLSVNW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTCAAGTTCTTGGAGTACATCTTTCATGCAAGGCCTTTCCACTTTCTTCTCCCTCAAACAGGAGAGTGCGAGCTCCATAAAATGCTTTAAACTGATCAGTATCTT
GCTGGACGGATTGTCACTGATAAGTTGTTTATCGATGGCGTCAATGCATGCACCATTTTGCACTTGTTGGATCACATATATTGCTAGATTGACACCATCTTCATCTCTTG
TGAAATCTATGGCCTTCTTGGAGGTTAAAAGCTCGAGGAGGACAACTCCAAAGCTATACACATCACTTTTATCTGTTAACTGGTAA
mRNA sequenceShow/hide mRNA sequence
GCATCTGATCCCAATTGTCTCTTCCTTTTCTTTTTTCTTTTTTCTCTTTCCTAACACCCAAGAATCCATCATTGGCATCTGTCATTCTACGAGTGTTTCATGGAATCATT
CCTGGTCTTTTTTTAATAATGAATATTCAAAGAGTACAGGAGATTAACACACCAAATCCAGTAGTCTAAAACCTTTTAAAGACTTTTAAGGATTACCCTCTTCAGCAATT
GTTTCTGGATTGTCCAATATTTGAGTTATGTATTCAAGTTCTTGGAGTACATCTTTCATGCAAGGCCTTTCCACTTTCTTCTCCCTCAAACAGGAGAGTGCGAGCTCCAT
AAAATGCTTTAAACTGATCAGTATCTTGCTGGACGGATTGTCACTGATAAGTTGTTTATCGATGGCGTCAATGCATGCACCATTTTGCACTTGTTGGATCACATATATTG
CTAGATTGACACCATCTTCATCTCTTGTGAAATCTATGGCCTTCTTGGAGGTTAAAAGCTCGAGGAGGACAACTCCAAAGCTATACACATCACTTTTATCTGTTAACTGG
TAATTTCGATAGTATTCTGGGTCTAGGTAACCTAATGTACCCTGTGCACAAGTTGAAACATGGCTTATTCCTGGCAAAGCCAATCTAGAAAGTCCAAAATCTGAGACTTT
GGCATTGAAGTTATCATCTAAAAGAATATTTGTCGACTTGACATCTCTATGATAGATGGGAGGGTATGCAGCTGAATGCAGATAAGCTAATGCTTCAGCAGTTTGTGAAG
CAATTTTTAGCCTTTTTCTCCAATCCAAGAAAGTAGGAACCTTACCATGTAAATGGTCATGCAAGGTACCATTGGAAATGTATTCATACACCATCAATGGTTGCTCAGTT
TCTACGCAACAACCTATAAGTTTCACAAGATTCCTGTGATTTACTTGAGATAGTATTCCGACTTCATTGAGTATTTGTTCAGT
Protein sequenceShow/hide protein sequence
MYSSSWSTSFMQGLSTFFSLKQESASSIKCFKLISILLDGLSLISCLSMASMHAPFCTCWITYIARLTPSSSLVKSMAFLEVKSSRRTTPKLYTSLLSVNW