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CSPI03G34780 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G34780
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionprotein LITTLE ZIPPER 4
Genome locationChr3:30551555..30551770
RNA-Seq ExpressionCSPI03G34780
SyntenyCSPI03G34780
Gene Ontology termsNA
InterPro domainsIPR039312 - Protein LITTLE ZIPPER


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3441681.1 hypothetical protein FNV43_RR15596 [Rhamnella rubrinervis]5.9e-2186.67Show/hide
Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKANASKSIPDLNLSSA---NPSKSSN
        MERLNS+LYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKL+K NSK+NA+KSIPDLNLSS    NPS SSN
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKANASKSIPDLNLSSA---NPSKSSN

XP_008442826.1 PREDICTED: protein LITTLE ZIPPER 4 [Cucumis melo]1.0e-2598.61Show/hide
Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKANASKSIPDLNLSSANPSKSSN
        MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKANASKSIPDLNLSSANPS SSN
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKANASKSIPDLNLSSANPSKSSN

XP_015898769.1 protein LITTLE ZIPPER 3 [Ziziphus jujuba]1.0e-2085.33Show/hide
Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKANASKSIPDLNLSSA---NPSKSSN
        MERLNS+LYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKL+K NSK+NA+K+IPDLNLSS+   NPS SSN
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKANASKSIPDLNLSSA---NPSKSSN

XP_022144704.1 protein LITTLE ZIPPER 4 [Momordica charantia]1.0e-2086.84Show/hide
Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKANA-SKSIPDLNLSSA---NPSKSSN
        MERLNS+LYLQNCYIMKENERLRKKAQ+LNQENQALLSELKQKLSKG+SK NA SKSIPDLNLSSA   NPS S+N
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKANA-SKSIPDLNLSSA---NPSKSSN

XP_022935644.1 protein LITTLE ZIPPER 4 [Cucurbita moschata]8.9e-2595.83Show/hide
Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKANASKSIPDLNLSSANPSKSSN
        MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKG+SKAN+SKSIPDLNLSSANPS SSN
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKANASKSIPDLNLSSANPSKSSN

TrEMBL top hitse value%identityAlignment
A0A0A0LE03 Uncharacterized protein5.1e-2698.61Show/hide
Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKANASKSIPDLNLSSANPSKSSN
        MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKANASKSIPDLNLSSANPS SSN
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKANASKSIPDLNLSSANPSKSSN

A0A1S3B7E3 protein LITTLE ZIPPER 45.1e-2698.61Show/hide
Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKANASKSIPDLNLSSANPSKSSN
        MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKANASKSIPDLNLSSANPS SSN
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKANASKSIPDLNLSSANPSKSSN

A0A6J1F606 protein LITTLE ZIPPER 44.3e-2595.83Show/hide
Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKANASKSIPDLNLSSANPSKSSN
        MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKG+SKAN+SKSIPDLNLSSANPS SSN
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKANASKSIPDLNLSSANPSKSSN

A0A6J1J6J7 protein LITTLE ZIPPER 44.3e-2595.83Show/hide
Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKANASKSIPDLNLSSANPSKSSN
        MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKG+SKAN+SKSIPDLNLSSANPS SSN
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKANASKSIPDLNLSSANPSKSSN

A0A6P4ALE9 protein LITTLE ZIPPER 34.9e-2185.33Show/hide
Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKANASKSIPDLNLSSA---NPSKSSN
        MERLNS+LYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKL+K NSK+NA+K+IPDLNLSS+   NPS SSN
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKANASKSIPDLNLSSA---NPSKSSN

SwissProt top hitse value%identityAlignment
Q56WL5 Protein LITTLE ZIPPER 47.3e-1469.12Show/hide
Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLS--KGNSKANASKSIPDLNLSSAN
        MERLNS+LYLQNCYI+KENERLRKKAQ+LNQENQ LL ELKQKLS  K +S +N   +  + NLSS++
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLS--KGNSKANASKSIPDLNLSSAN

Q9LXI8 Protein LITTLE ZIPPER 31.4e-1266.67Show/hide
Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKANASKSIPDLNLSSAN
        MERLNS+L+++NCYIMKENERLRKKA+LLNQENQ LL +LKQKLSK  +  N S +  D   SSA+
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKANASKSIPDLNLSSAN

Arabidopsis top hitse value%identityAlignment
AT2G45450.1 protein binding1.4e-0453.49Show/hide
Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQK
        ME +N +LY++N  I++ENE+L+KKA LL+QEN+ L S L+ K
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQK

AT3G52770.1 protein binding9.8e-1466.67Show/hide
Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKANASKSIPDLNLSSAN
        MERLNS+L+++NCYIMKENERLRKKA+LLNQENQ LL +LKQKLSK  +  N S +  D   SSA+
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKANASKSIPDLNLSSAN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGGCTAAACTCAGAGTTATACTTGCAAAACTGTTACATAATGAAGGAAAATGAGAGACTGAGGAAGAAAGCTCAACTTTTGAACCAAGAAAATCAAGCTCTTCT
TTCAGAACTGAAGCAGAAATTATCAAAAGGAAATTCAAAAGCCAATGCTTCAAAATCAATTCCTGATCTTAATCTCTCCTCTGCAAATCCTTCTAAATCTTCCAAT
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGGCTAAACTCAGAGTTATACTTGCAAAACTGTTACATAATGAAGGAAAATGAGAGACTGAGGAAGAAAGCTCAACTTTTGAACCAAGAAAATCAAGCTCTTCT
TTCAGAACTGAAGCAGAAATTATCAAAAGGAAATTCAAAAGCCAATGCTTCAAAATCAATTCCTGATCTTAATCTCTCCTCTGCAAATCCTTCTAAATCTTCCAAT
Protein sequenceShow/hide protein sequence
MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGNSKANASKSIPDLNLSSANPSKSSN