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CSPI03G35780 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G35780
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionML domain-containing protein
Genome locationChr3:31192847..31196420
RNA-Seq ExpressionCSPI03G35780
SyntenyCSPI03G35780
Gene Ontology termsGO:0015918 - sterol transport (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsIPR003172 - MD-2-related lipid-recognition domain
IPR014756 - Immunoglobulin E-set
IPR039670 - Sterol transport protein NPC2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136524.1 MD-2-related lipid-recognition protein ROSY1 [Cucumis sativus]3.2e-8699.35Show/hide
Query:  MEPIFQMKLIFPFLLWLCFFPQFSFATRLQLCDETAKYDITVKGVEISPNPVVRGHPTNMIFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
        MEPIFQMKLIFPFLLWLCFFPQFSF+TRLQLCDETAKYDITVKGVEISPNPVVRGHPTNMIFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
Subjt:  MEPIFQMKLIFPFLLWLCFFPQFSFATRLQLCDETAKYDITVKGVEISPNPVVRGHPTNMIFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP

Query:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
Subjt:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

XP_008442939.1 PREDICTED: uncharacterized protein LOC103486693 [Cucumis melo]4.3e-8394.84Show/hide
Query:  MEPIFQMKLIFPFLLWLCFFPQFSFATRLQLCDETAKYDITVKGVEISPNPVVRGHPTNMIFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
        MEP FQMKLIFPFLLWLCFFPQFSFATR+QLCDETA+YDITVKGVEISP+P+VRGHPTNM FNL+IG PIIAGKMVVDISYFGWHIYSDSHDICVETSCP
Subjt:  MEPIFQMKLIFPFLLWLCFFPQFSFATRLQLCDETAKYDITVKGVEISPNPVVRGHPTNMIFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP

Query:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
Subjt:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

XP_022151451.1 uncharacterized protein LOC111019382 [Momordica charantia]3.1e-7387.1Show/hide
Query:  MEPIFQMKLIFPFLLWLCFFPQFSFATRLQLCDETAKYDITVKGVEISPNPVVRGHPTNMIFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
        MEP FQMKLIF FL++LC   QFS AT +QLCDETA YDI VKGVEISP+P+VRGHPTNM FNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
Subjt:  MEPIFQMKLIFPFLLWLCFFPQFSFATRLQLCDETAKYDITVKGVEISPNPVVRGHPTNMIFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP

Query:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        Y  GDFAL PLRTPLAFF PGSYHMQI IVDGDDNKLTCFGFDYELVIASLFGDS
Subjt:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

XP_022983145.1 uncharacterized protein LOC111481784 [Cucurbita maxima]1.7e-7185.16Show/hide
Query:  MEPIFQMKLIFPFLLWLCFFPQFSFATRLQLCDETAKYDITVKGVEISPNPVVRGHPTNMIFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
        MEP   MKLIF  LLWLCF  QFSFATR+QLCDETAKYDI VKGV+ISP+P+VRG P  M FNLIIGKPIIAGKMVVDISYFGWH+Y DSHDICVETSCP
Subjt:  MEPIFQMKLIFPFLLWLCFFPQFSFATRLQLCDETAKYDITVKGVEISPNPVVRGHPTNMIFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP

Query:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        Y  GDFAL PL+TPLAFFLPGSYHMQITIVDGDDNKL CFGFDYELVIASLFGDS
Subjt:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

XP_038905833.1 uncharacterized protein LOC120091785 [Benincasa hispida]8.3e-7990.97Show/hide
Query:  MEPIFQMKLIFPFLLWLCFFPQFSFATRLQLCDETAKYDITVKGVEISPNPVVRGHPTNMIFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
        MEP FQMKLIFP LLWLCF PQFSFAT++QLCDETAKYD+TVKGVEISP+P+VRGHPTNM FNLIIGKPIIAGKMVVDISYFGWHIYS+SHDICVETSCP
Subjt:  MEPIFQMKLIFPFLLWLCFFPQFSFATRLQLCDETAKYDITVKGVEISPNPVVRGHPTNMIFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP

Query:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        Y  GDFALPP RTPLAFFLPGSYHMQITIVDGDDNKLTCF FDYELVIASLFGDS
Subjt:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

TrEMBL top hitse value%identityAlignment
A0A1S3B7M8 uncharacterized protein LOC1034866932.1e-8394.84Show/hide
Query:  MEPIFQMKLIFPFLLWLCFFPQFSFATRLQLCDETAKYDITVKGVEISPNPVVRGHPTNMIFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
        MEP FQMKLIFPFLLWLCFFPQFSFATR+QLCDETA+YDITVKGVEISP+P+VRGHPTNM FNL+IG PIIAGKMVVDISYFGWHIYSDSHDICVETSCP
Subjt:  MEPIFQMKLIFPFLLWLCFFPQFSFATRLQLCDETAKYDITVKGVEISPNPVVRGHPTNMIFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP

Query:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
Subjt:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

A0A5D3DP69 Putative phosphatidylglycerol/phosphatidylinositol transfer protein2.1e-8394.84Show/hide
Query:  MEPIFQMKLIFPFLLWLCFFPQFSFATRLQLCDETAKYDITVKGVEISPNPVVRGHPTNMIFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
        MEP FQMKLIFPFLLWLCFFPQFSFATR+QLCDETA+YDITVKGVEISP+P+VRGHPTNM FNL+IG PIIAGKMVVDISYFGWHIYSDSHDICVETSCP
Subjt:  MEPIFQMKLIFPFLLWLCFFPQFSFATRLQLCDETAKYDITVKGVEISPNPVVRGHPTNMIFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP

Query:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
Subjt:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

A0A6J1DDJ6 uncharacterized protein LOC1110193821.5e-7387.1Show/hide
Query:  MEPIFQMKLIFPFLLWLCFFPQFSFATRLQLCDETAKYDITVKGVEISPNPVVRGHPTNMIFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
        MEP FQMKLIF FL++LC   QFS AT +QLCDETA YDI VKGVEISP+P+VRGHPTNM FNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
Subjt:  MEPIFQMKLIFPFLLWLCFFPQFSFATRLQLCDETAKYDITVKGVEISPNPVVRGHPTNMIFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP

Query:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        Y  GDFAL PLRTPLAFF PGSYHMQI IVDGDDNKLTCFGFDYELVIASLFGDS
Subjt:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

A0A6J1FIH7 uncharacterized protein LOC111445883 isoform X22.6e-7083.87Show/hide
Query:  MEPIFQMKLIFPFLLWLCFFPQFSFATRLQLCDETAKYDITVKGVEISPNPVVRGHPTNMIFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
        MEP   MKLIF FLLWL F PQF FATR+ LCDETAKYDI VKGVEISP+P+VRGHPTNM  NLIIGKPIIAGKMVVDI YFGWH+YSDS+DICVETSCP
Subjt:  MEPIFQMKLIFPFLLWLCFFPQFSFATRLQLCDETAKYDITVKGVEISPNPVVRGHPTNMIFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP

Query:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        Y SGDFAL P +TPLAFF+PGSYHMQITI+DG DNKLTCFGFDYELVIASLFG S
Subjt:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

A0A6J1J1A9 uncharacterized protein LOC1114817848.2e-7285.16Show/hide
Query:  MEPIFQMKLIFPFLLWLCFFPQFSFATRLQLCDETAKYDITVKGVEISPNPVVRGHPTNMIFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
        MEP   MKLIF  LLWLCF  QFSFATR+QLCDETAKYDI VKGV+ISP+P+VRG P  M FNLIIGKPIIAGKMVVDISYFGWH+Y DSHDICVETSCP
Subjt:  MEPIFQMKLIFPFLLWLCFFPQFSFATRLQLCDETAKYDITVKGVEISPNPVVRGHPTNMIFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP

Query:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        Y  GDFAL PL+TPLAFFLPGSYHMQITIVDGDDNKL CFGFDYELVIASLFGDS
Subjt:  YLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

SwissProt top hitse value%identityAlignment
Q9AST8 MD-2-related lipid-recognition protein ROSY14.1e-0428.93Show/hide
Query:  LLWLCFFPQFSFATRLQLCDETAKYDITVKGVEISPNPVVRGHPTNMIFNLIIGKPIIAGKMV-VDISYFGWHIYSDSHDICVETSCPYLSGD--FALPP
        LL   FF       + Q CD   +Y + V  VEISP+PV R     +    +  K I  G  V + ++   + + + S+ +C  T+CP   G     LP 
Subjt:  LLWLCFFPQFSFATRLQLCDETAKYDITVKGVEISPNPVVRGHPTNMIFNLIIGKPIIAGKMV-VDISYFGWHIYSDSHDICVETSCPYLSGD--FALPP

Query:  LRTPLAFFLPGSYHMQITIVD
        + TP        Y + I+I D
Subjt:  LRTPLAFFLPGSYHMQITIVD

Arabidopsis top hitse value%identityAlignment
AT2G16005.1 MD-2-related lipid recognition domain-containing protein2.9e-0528.93Show/hide
Query:  LLWLCFFPQFSFATRLQLCDETAKYDITVKGVEISPNPVVRGHPTNMIFNLIIGKPIIAGKMV-VDISYFGWHIYSDSHDICVETSCPYLSGD--FALPP
        LL   FF       + Q CD   +Y + V  VEISP+PV R     +    +  K I  G  V + ++   + + + S+ +C  T+CP   G     LP 
Subjt:  LLWLCFFPQFSFATRLQLCDETAKYDITVKGVEISPNPVVRGHPTNMIFNLIIGKPIIAGKMV-VDISYFGWHIYSDSHDICVETSCPYLSGD--FALPP

Query:  LRTPLAFFLPGSYHMQITIVD
        + TP        Y + I+I D
Subjt:  LRTPLAFFLPGSYHMQITIVD

AT3G11780.1 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein2.1e-2737.98Show/hide
Query:  ATRLQLCDETAKYDITVKGVEISPNPVVRGHPTNMIFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLAFFLPGSYHM
        AT +  CD   +Y++ V+GV+I+P P+ RG P     +      I +GK+V+++SYFGWHI+S++HD+C ETSCP   GDF +   +    +  PGSY +
Subjt:  ATRLQLCDETAKYDITVKGVEISPNPVVRGHPTNMIFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLAFFLPGSYHM

Query:  QITIVDGDDNKLTCFGFDYELVIASLFGD
        ++ ++DG   +LTC  F +++   S   D
Subjt:  QITIVDGDDNKLTCFGFDYELVIASLFGD

AT3G11780.2 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein3.3e-2535.37Show/hide
Query:  ATRLQLCDETAKYDITVKGVEISPNPVVRGHPTNMIFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDF------ALPPLRTP-----
        AT +  CD   +Y++ V+GV+I+P P+ RG P     +      I +GK+V+++SYFGWHI+S++HD+C ETSCP   GDF       LP    P     
Subjt:  ATRLQLCDETAKYDITVKGVEISPNPVVRGHPTNMIFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDF------ALPPLRTP-----

Query:  -------LAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGD
                 F + GSY +++ ++DG   +LTC  F +++   S   D
Subjt:  -------LAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGD

AT3G44100.1 MD-2-related lipid recognition domain-containing protein2.3e-1834.31Show/hide
Query:  LLWLCFFPQFSFATRLQLCDETAKYDITVKGVEISPNPVVRGHPTNMIFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRT
        LL   FF     AT    CD+     + V GV+ISP+PVV G           G+ I  GK+V+ + Y G  +++++HD+C ET+CP   G F L   +T
Subjt:  LLWLCFFPQFSFATRLQLCDETAKYDITVKGVEISPNPVVRGHPTNMIFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRT

Query:  PLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIAS
          +   PG+Y +++TI D +  +LTC  F +++ + S
Subjt:  PLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIAS

AT5G06480.1 Immunoglobulin E-set superfamily protein7.1e-2837.21Show/hide
Query:  ATRLQLCDETAKYDITVKGVEISPNPVVRGHPTNMIFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLAFFLPGSYHM
        A  +  C+E A+Y++ VK V+ISPNP+  G P     +   G+ I  GK+V+++SYFGWH++S++HD+C ETSCP  +GDF +   +    +  PGSY +
Subjt:  ATRLQLCDETAKYDITVKGVEISPNPVVRGHPTNMIFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLAFFLPGSYHM

Query:  QITIVDGDDNKLTCFGFDYELVIASLFGD
        ++ ++D    +LTC  F +++ + +   D
Subjt:  QITIVDGDDNKLTCFGFDYELVIASLFGD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCTCAAAAAAGAGCATTTCCATGGAACCCATTTTTCAGATGAAGCTGATTTTCCCATTTCTTCTTTGGTTGTGCTTTTTTCCACAGTTCTCTTTTGCCACTCGACT
CCAACTATGTGATGAGACCGCTAAGTATGATATCACGGTGAAAGGAGTAGAGATATCTCCCAACCCCGTAGTTAGAGGTCATCCAACAAATATGATCTTCAATCTAATTA
TAGGTAAGCCAATCATTGCAGGAAAAATGGTAGTTGATATTTCATATTTCGGATGGCACATATATAGTGACAGCCATGACATTTGTGTTGAGACGTCCTGCCCTTACTTG
TCTGGTGATTTTGCACTCCCTCCACTGCGAACACCTCTGGCGTTCTTTTTACCTGGTTCGTATCATATGCAGATAACCATTGTTGATGGAGATGATAATAAACTTACATG
CTTTGGCTTTGATTATGAATTGGTGATTGCATCACTATTTGGAGATAGCTAA
mRNA sequenceShow/hide mRNA sequence
CATAATTTTTTGGAATTTTATCATCATCCCATTTGCTAGACTCCGACGAAGAAGGGATTTTTCTCACTCACCAATGACCTCAAAAAAGAGCATTTCCATGGAACCCATTT
TTCAGATGAAGCTGATTTTCCCATTTCTTCTTTGGTTGTGCTTTTTTCCACAGTTCTCTTTTGCCACTCGACTCCAACTATGTGATGAGACCGCTAAGTATGATATCACG
GTGAAAGGAGTAGAGATATCTCCCAACCCCGTAGTTAGAGGTCATCCAACAAATATGATCTTCAATCTAATTATAGGTAAGCCAATCATTGCAGGAAAAATGGTAGTTGA
TATTTCATATTTCGGATGGCACATATATAGTGACAGCCATGACATTTGTGTTGAGACGTCCTGCCCTTACTTGTCTGGTGATTTTGCACTCCCTCCACTGCGAACACCTC
TGGCGTTCTTTTTACCTGGTTCGTATCATATGCAGATAACCATTGTTGATGGAGATGATAATAAACTTACATGCTTTGGCTTTGATTATGAATTGGTGATTGCATCACTA
TTTGGAGATAGCTAA
Protein sequenceShow/hide protein sequence
MTSKKSISMEPIFQMKLIFPFLLWLCFFPQFSFATRLQLCDETAKYDITVKGVEISPNPVVRGHPTNMIFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYL
SGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS