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CSPI03G37470 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G37470
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionaladin
Genome locationChr3:32478640..32479156
RNA-Seq ExpressionCSPI03G37470
SyntenyCSPI03G37470
Gene Ontology termsGO:0006913 - nucleocytoplasmic transport (biological process)
GO:0005643 - nuclear pore (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651166.1 hypothetical protein Csa_002057 [Cucumis sativus]5.3e-1980.95Show/hide
Query:  GGLCLLHASKGRICIWAASFPGNDASVRPGAMSFLGSFSRGSGVRYTLVDFLRSHDEQCKPLS
        GG  L  A KG ICIWAASFPGN ASVRPGA+SFLGSFSRGSGVRYTLVDFLRSHDEQ   L+
Subjt:  GGLCLLHASKGRICIWAASFPGNDASVRPGAMSFLGSFSRGSGVRYTLVDFLRSHDEQCKPLS
XP_008443209.1 PREDICTED: aladin [Cucumis melo]1.1e-1975.34Show/hide
Query:  GGLCLLHASKGRICIWAASFPGNDASVRPGAMSFLGSFSRGSGVRYTLVDFLRSHDEQCKPLSLWKNPSNDFL
        GG  L  A KG ICIWAASFPGN ASVRPGA+SFLGSFSRGSGVRYTLVDFLRSHDEQ   LS W +P+  +L
Subjt:  GGLCLLHASKGRICIWAASFPGNDASVRPGAMSFLGSFSRGSGVRYTLVDFLRSHDEQCKPLSLWKNPSNDFL
XP_011652161.1 aladin [Cucumis sativus]2.4e-1982.54Show/hide
Query:  GGLCLLHASKGRICIWAASFPGNDASVRPGAMSFLGSFSRGSGVRYTLVDFLRSHDEQCKPLS
        GG  L  A KG ICIWAASFPGN ASVRPGA+SFLGSFSRGSGVRYTLVDFLRSHDEQ   LS
Subjt:  GGLCLLHASKGRICIWAASFPGNDASVRPGAMSFLGSFSRGSGVRYTLVDFLRSHDEQCKPLS
XP_022152054.1 aladin isoform X2 [Momordica charantia]1.3e-1777.78Show/hide
Query:  GGLCLLHASKGRICIWAASFPGNDASVRPGAMSFLGSFSRGSGVRYTLVDFLRSHDEQCKPLS
        GG  L  A KG ICIWAASFPGN A VRPGA+SFLGSFSRGSGVRYTLVDFL+S DEQ   LS
Subjt:  GGLCLLHASKGRICIWAASFPGNDASVRPGAMSFLGSFSRGSGVRYTLVDFLRSHDEQCKPLS
XP_038905166.1 aladin [Benincasa hispida]4.1e-1980.95Show/hide
Query:  GGLCLLHASKGRICIWAASFPGNDASVRPGAMSFLGSFSRGSGVRYTLVDFLRSHDEQCKPLS
        GG  L  A KG ICIWAASFPGN ASVRPGA+SFLGSFSRGSGVRYTLVDFLRSHDEQ   +S
Subjt:  GGLCLLHASKGRICIWAASFPGNDASVRPGAMSFLGSFSRGSGVRYTLVDFLRSHDEQCKPLS
TrEMBL top hitse value%identityAlignment
A0A0A0LBK3 Uncharacterized protein2.4e-3391.14Show/hide
Query:  MTCKEMLKFLSGDQTPGGLCLLHASKGRICIWAASFPGNDASVRPGAMSFLGSFSRGSGVRYTLVDFLRSHDEQCKPLS
        MTCK MLKFLSGDQT GGLCLLHASKG ICIWAASFPGNDASVRPGAMSFLGSFSRG GVRYTLVDFLRSHDEQ   LS
Subjt:  MTCKEMLKFLSGDQTPGGLCLLHASKGRICIWAASFPGNDASVRPGAMSFLGSFSRGSGVRYTLVDFLRSHDEQCKPLS
A0A0A0LH99 WD_REPEATS_REGION domain-containing protein1.2e-1982.54Show/hide
Query:  GGLCLLHASKGRICIWAASFPGNDASVRPGAMSFLGSFSRGSGVRYTLVDFLRSHDEQCKPLS
        GG  L  A KG ICIWAASFPGN ASVRPGA+SFLGSFSRGSGVRYTLVDFLRSHDEQ   LS
Subjt:  GGLCLLHASKGRICIWAASFPGNDASVRPGAMSFLGSFSRGSGVRYTLVDFLRSHDEQCKPLS
A0A1S3B899 aladin5.2e-2075.34Show/hide
Query:  GGLCLLHASKGRICIWAASFPGNDASVRPGAMSFLGSFSRGSGVRYTLVDFLRSHDEQCKPLSLWKNPSNDFL
        GG  L  A KG ICIWAASFPGN ASVRPGA+SFLGSFSRGSGVRYTLVDFLRSHDEQ   LS W +P+  +L
Subjt:  GGLCLLHASKGRICIWAASFPGNDASVRPGAMSFLGSFSRGSGVRYTLVDFLRSHDEQCKPLSLWKNPSNDFL
A0A6J1DDU6 aladin isoform X16.3e-1877.78Show/hide
Query:  GGLCLLHASKGRICIWAASFPGNDASVRPGAMSFLGSFSRGSGVRYTLVDFLRSHDEQCKPLS
        GG  L  A KG ICIWAASFPGN A VRPGA+SFLGSFSRGSGVRYTLVDFL+S DEQ   LS
Subjt:  GGLCLLHASKGRICIWAASFPGNDASVRPGAMSFLGSFSRGSGVRYTLVDFLRSHDEQCKPLS
A0A6J1DEW4 aladin isoform X26.3e-1877.78Show/hide
Query:  GGLCLLHASKGRICIWAASFPGNDASVRPGAMSFLGSFSRGSGVRYTLVDFLRSHDEQCKPLS
        GG  L  A KG ICIWAASFPGN A VRPGA+SFLGSFSRGSGVRYTLVDFL+S DEQ   LS
Subjt:  GGLCLLHASKGRICIWAASFPGNDASVRPGAMSFLGSFSRGSGVRYTLVDFLRSHDEQCKPLS
SwissProt top hitse value%identityAlignment
Q8GWR1 Aladin2.9e-1259.38Show/hide
Query:  GGLCLLHASKGRICIWAASFPGNDASVRPGAMSFLGSFSRGSGVRYTLVDFLR-SHDEQCKPLS
        GG  L  A +G ICIWAAS+PGN A VR G  +  GS SRGSG R+ LVDFLR  +DEQ   LS
Subjt:  GGLCLLHASKGRICIWAASFPGNDASVRPGAMSFLGSFSRGSGVRYTLVDFLR-SHDEQCKPLS
Arabidopsis top hitse value%identityAlignment
AT3G56900.1 Transducin/WD40 repeat-like superfamily protein2.1e-1359.38Show/hide
Query:  GGLCLLHASKGRICIWAASFPGNDASVRPGAMSFLGSFSRGSGVRYTLVDFLR-SHDEQCKPLS
        GG  L  A +G ICIWAAS+PGN A VR G  +  GS SRGSG R+ LVDFLR  +DEQ   LS
Subjt:  GGLCLLHASKGRICIWAASFPGNDASVRPGAMSFLGSFSRGSGVRYTLVDFLR-SHDEQCKPLS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTGCAAAGAGATGTTAAAGTTCTTGAGTGGAGACCAAACGCCGGGAGGACTCTGTCTGTTGCATGCAAGCAAAGGTAGAATTTGTATATGGGCTGCTTCTTTCCC
TGGAAATGATGCTTCCGTGAGACCTGGTGCCATGTCTTTCTTAGGATCATTCTCAAGAGGCTCCGGGGTTCGATATACGCTAGTTGATTTTCTTCGAAGCCATGATGAAC
AGTGCAAACCCCTTTCTCTGTGGAAGAATCCATCAAATGATTTTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTTGCAAAGAGATGTTAAAGTTCTTGAGTGGAGACCAAACGCCGGGAGGACTCTGTCTGTTGCATGCAAGCAAAGGTAGAATTTGTATATGGGCTGCTTCTTTCCC
TGGAAATGATGCTTCCGTGAGACCTGGTGCCATGTCTTTCTTAGGATCATTCTCAAGAGGCTCCGGGGTTCGATATACGCTAGTTGATTTTCTTCGAAGCCATGATGAAC
AGTGCAAACCCCTTTCTCTGTGGAAGAATCCATCAAATGATTTTCTTTGA
Protein sequenceShow/hide protein sequence
MTCKEMLKFLSGDQTPGGLCLLHASKGRICIWAASFPGNDASVRPGAMSFLGSFSRGSGVRYTLVDFLRSHDEQCKPLSLWKNPSNDFL