; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G37890 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G37890
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionribosomal RNA small subunit methyltransferase NEP1
Genome locationChr3:32820503..32823081
RNA-Seq ExpressionCSPI03G37890
SyntenyCSPI03G37890
Gene Ontology termsGO:0070475 - rRNA base methylation (biological process)
GO:0019843 - rRNA binding (molecular function)
GO:0070037 - rRNA (pseudouridine) methyltransferase activity (molecular function)
InterPro domainsIPR005304 - Ribosomal biogenesis, methyltransferase, EMG1/NEP1
IPR029026 - tRNA (guanine-N1-)-methyltransferase, N-terminal
IPR029028 - Alpha/beta knot methyltransferases


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017643.1 Ribosomal RNA small subunit methyltransferase NEP1, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-13790.32Show/hide
Query:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEP----AKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDH
        MVRPFAAKGKKRKK+E+YDRD+D EEST+ +KK M+ENEPDE+P    A+E+FHELEGIPI PKDPK+DS AGVIF+LERASLEVAKVGKNYQLLNSDDH
Subjt:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEP----AKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDH

Query:  SNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP
        SN+LRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP
Subjt:  SNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP

Query:  ANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        +N RKMGFSHSSDKLVKVR YLDAV+DDVDLVFVVGAMAHGKIET YTDDLLAISEYPLSASCCIADICKDLA+KWNVG
Subjt:  ANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

XP_004136640.2 ribosomal RNA small subunit methyltransferase nep-1 [Cucumis sativus]2.3e-150100Show/hide
Query:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYL
        MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYL
Subjt:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYL

Query:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR
        RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR
Subjt:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR

Query:  KMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        KMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Subjt:  KMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

XP_008443268.1 PREDICTED: ribosomal RNA small subunit methyltransferase NEP1 [Cucumis melo]6.0e-14696.36Show/hide
Query:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYL
        MVRPFAAKGKKRKK+EKYDRDED EES+SP+KKVM+ENEPDEEP KEDFHELEGIPI PKDPK D+NAGVIFILERASLEVAKVGKNYQLLNSDDHSNYL
Subjt:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYL

Query:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR
        RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR
Subjt:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR

Query:  KMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        KMGFSHSSDKLVK+RNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Subjt:  KMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

XP_022935622.1 ribosomal RNA small subunit methyltransferase nep-1 [Cucurbita moschata]3.9e-13790.32Show/hide
Query:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEP----AKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDH
        MVRPFAAKGKKRKK+E+YDRD+D EEST+ +KK M+ENEPDE+P    A+E+FHELEGIPI PKDPK+DS AGVIF+LERASLEVAKVGKNYQLLNSDDH
Subjt:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEP----AKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDH

Query:  SNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP
        SN+LRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP
Subjt:  SNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP

Query:  ANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        +N RKMGFSHSSDKLVKVR YLDAV+DDVDLVFVVGAMAHGKIET YTDDLLAISEYPLSASCCIADICKDLA+KWNVG
Subjt:  ANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

XP_038905075.1 ribosomal RNA small subunit methyltransferase nep-1 [Benincasa hispida]1.2e-13891.64Show/hide
Query:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYL
        MVRPFAAKGKKRKKSEKYDRD+D  EST P+KK   ENEPDEEP KEDFHELEGIPI PKDP +D +AGVIF+LERASLEVAKVGKNYQLLNSDDHSN+L
Subjt:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYL

Query:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR
        R+NNRNPGDYRPDILHQALLAIFDSRIAKAGRLK VYVKTEKGLLIE+KPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPAN R
Subjt:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR

Query:  KMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        KMGFSHSSDKLVK+RNYLDAV+DDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWN+G
Subjt:  KMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

TrEMBL top hitse value%identityAlignment
A0A0A0LFI3 Uncharacterized protein1.1e-150100Show/hide
Query:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYL
        MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYL
Subjt:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYL

Query:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR
        RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR
Subjt:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR

Query:  KMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        KMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Subjt:  KMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

A0A1S3B7L0 ribosomal RNA small subunit methyltransferase NEP12.9e-14696.36Show/hide
Query:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYL
        MVRPFAAKGKKRKK+EKYDRDED EES+SP+KKVM+ENEPDEEP KEDFHELEGIPI PKDPK D+NAGVIFILERASLEVAKVGKNYQLLNSDDHSNYL
Subjt:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYL

Query:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR
        RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR
Subjt:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR

Query:  KMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        KMGFSHSSDKLVK+RNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Subjt:  KMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

A0A5D3DPQ6 Ribosomal RNA small subunit methyltransferase NEP12.9e-14696.36Show/hide
Query:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYL
        MVRPFAAKGKKRKK+EKYDRDED EES+SP+KKVM+ENEPDEEP KEDFHELEGIPI PKDPK D+NAGVIFILERASLEVAKVGKNYQLLNSDDHSNYL
Subjt:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYL

Query:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR
        RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR
Subjt:  RRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCR

Query:  KMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        KMGFSHSSDKLVK+RNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Subjt:  KMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

A0A6J1F634 ribosomal RNA small subunit methyltransferase nep-11.9e-13790.32Show/hide
Query:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEP----AKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDH
        MVRPFAAKGKKRKK+E+YDRD+D EEST+ +KK M+ENEPDE+P    A+E+FHELEGIPI PKDPK+DS AGVIF+LERASLEVAKVGKNYQLLNSDDH
Subjt:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEP----AKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDH

Query:  SNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP
        SN+LRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP
Subjt:  SNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP

Query:  ANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        +N RKMGFSHSSDKLVKVR YLDAV+DDVDLVFVVGAMAHGKIET YTDDLLAISEYPLSASCCIADICKDLA+KWNVG
Subjt:  ANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

A0A6J1J0G6 ribosomal RNA small subunit methyltransferase nep-19.3e-13789.96Show/hide
Query:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEP----AKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDH
        MVRPFAAKGKKRKK+E+YDRD+D EES + +KK M+ENEPDE+P    A+E+FHELEGIPI PKDPK+DS AGVIF+LERASLEVAKVGKNYQLLNSDDH
Subjt:  MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEP----AKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDH

Query:  SNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP
        SN+LRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP
Subjt:  SNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLP

Query:  ANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        +N RKMGFSHSSDKLVKVR YLDAV+DDVDLVFVVGAMAHGKIET YTDDLLAISEYPLSASCCIADICKDLA+KWNVG
Subjt:  ANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

SwissProt top hitse value%identityAlignment
O35130 Ribosomal RNA small subunit methyltransferase NEP17.8e-4847.8Show/hide
Query:  VIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLL
        +I +LE ASLE  KVGK Y+LLN D H + L +N R+PG+ RPDI HQ+LL + DS + +AG L+ VY+ T+K +LIE+ P  R+PRT  RF G+M+QLL
Subjt:  VIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLL

Query:  QKLSITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLA
         KLS+ AA   +KL +VIKNPV+ + P  C K+G S S + +  +R   + V     +VFVVGA AHGK+  +YT+ +++IS YPLSA+   A +     
Subjt:  QKLSITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLA

Query:  EKWNV
        E W V
Subjt:  EKWNV

Q06287 Ribosomal RNA small subunit methyltransferase NEP12.1e-4543.04Show/hide
Query:  IPIAPK--DPKNDSNAGVIFILERASLEVAKVGKN------YQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLI
        +P AP     K+     +I +L  ASLE  K+  N      Y LLN DDH   L++  R+  + RPDI HQ LL + DS I KAG+L+ VY++T +G+LI
Subjt:  IPIAPK--DPKNDSNAGVIFILERASLEVAKVGKN------YQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLI

Query:  EIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGK--IETDYT
        E+ P VR+PRT KRF G+M+QLL KLSI +    EKL +VIKNP+T +LP  CRK+  S  +  +++V++Y++ + DD  +   VGAMA GK     +Y 
Subjt:  EIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGK--IETDYT

Query:  DDLLAISEYPLSASCCIADICKDLAEKWNV
        D+ + +S YPLSAS   +  C    + WN+
Subjt:  DDLLAISEYPLSASCCIADICKDLAEKWNV

Q92979 Ribosomal RNA small subunit methyltransferase NEP13.0e-4743.98Show/hide
Query:  EPDEEPAKEDFHELEGIPIAPKDPKNDSNAGV-----IFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRL
        +P E    E   + + +P  PK P+  +   +     I +LE ASLE  KVGK Y+LLN D H + L +N R+PG+ RPDI HQ+LL + DS + +AG L
Subjt:  EPDEEPAKEDFHELEGIPIAPKDPKNDSNAGV-----IFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRL

Query:  KVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGA
        + VY+ T+K +LIE+ P  R+PRT  RF G+M+QLL KLS+ AA   +KL +VIKNPV+ + P  C K+G S S   +  VR   + V     +VFVVGA
Subjt:  KVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGA

Query:  MAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNV
         AHGK+  +YT+ +++IS YPLSA+   A +     E W V
Subjt:  MAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNV

Q9W4J5 Ribosomal RNA small subunit methyltransferase NEP11.1e-4644.91Show/hide
Query:  NDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG
        N +   +I +LE A LE  KV   ++LLN DDH+  +R+N R+PG  RPDI HQ LL +FDS + +AG L+ V+V+TE  +LIEI P  R+PRT KRF G
Subjt:  NDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYG

Query:  VMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYL-----DAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSAS
        +M+QLL K  I A     +L  VIKNP+T ++P  C+K   S S   L   R+ +      +   D  +V V+GA AHG ++TDYT++L +IS YPLSA+
Subjt:  VMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYL-----DAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSAS

Query:  CCIADICKDLAEKWNV
           + IC    E W V
Subjt:  CCIADICKDLAEKWNV

Q9XX15 Ribosomal RNA small subunit methyltransferase nep-14.7e-4547.03Show/hide
Query:  ILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKL
        +LE  SLE AKVG  Y +L+SD H+N+LR+  ++P DYRPDILHQ LL + DS + +AG+L+ V+ +T K +L+++ P  R+PRT  RF G+M+QLL KL
Subjt:  ILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKL

Query:  SITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKW
        SI AA   +KL  V+KNPV+ +LP   RKM  S +  +L  + N L A + D  LV ++G +A GKI  DY D    IS YPLSA+   A +   L E W
Subjt:  SITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKW

Query:  NV
         +
Subjt:  NV

Arabidopsis top hitse value%identityAlignment
AT3G57000.1 nucleolar essential protein-related2.5e-8155.67Show/hide
Query:  MVRPFAAKGKKRK-KSEKYDRDED-------------AEESTSPSKK---VMLENEPDEE-------PAKEDFHELEGIPIAPKDPKNDSNAGVIFILER
        MVRP+  K  KRK + E+YD++ED             A ES+  +KK      E + DEE        A ED   + GIPI    P N   +G++F+LE+
Subjt:  MVRPFAAKGKKRK-KSEKYDRDED-------------AEESTSPSKK---VMLENEPDEE-------PAKEDFHELEGIPIAPKDPKNDSNAGVIFILER

Query:  ASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITA
        ASLEVAKVGK YQLLNSDDH+N+L++NNRNP DYRPDI HQALL I DS + KAGRLK VYV+TEKG+L E+KP+VR+PRT KRF G+MLQLLQKLSITA
Subjt:  ASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITA

Query:  AGKREKLFRVIKNPVTQ-YLPANCRKMGFSHSSDKLVKVRNYLDAV-KDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNV
           REKL R +KNP+ + +LP N  ++GFSHSS+KLV ++ +L  V  DD D VFVVGAMAHGKI+ +Y D+ +++SEYPLSA+ CI+ IC+ LA  WN+
Subjt:  AGKREKLFRVIKNPVTQ-YLPANCRKMGFSHSSDKLVKVRNYLDAV-KDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCGACCATTTGCGGCGAAGGGGAAGAAGAGAAAGAAGTCGGAGAAATACGACAGAGACGAAGATGCCGAAGAATCCACCTCTCCGTCCAAGAAAGTTATGTTGGA
GAACGAACCTGATGAAGAACCAGCCAAGGAGGACTTTCATGAACTTGAAGGTATTCCTATTGCTCCGAAAGACCCCAAGAATGATAGCAATGCTGGTGTTATCTTCATCC
TTGAAAGAGCTTCTCTGGAAGTTGCCAAAGTTGGGAAGAATTACCAGCTGTTGAATTCTGATGACCACTCCAATTATTTGCGGAGGAATAACAGAAATCCTGGGGATTAT
AGACCTGATATCTTGCATCAAGCGCTTTTGGCGATTTTCGATAGCCGAATTGCAAAGGCTGGAAGATTGAAAGTTGTTTATGTGAAAACTGAGAAAGGTTTATTAATTGA
AATTAAACCATACGTTCGTCTTCCAAGGACGCAGAAACGATTTTATGGAGTTATGTTGCAATTGCTACAAAAGTTAAGCATCACAGCTGCGGGTAAGCGTGAGAAACTCT
TTCGGGTGATAAAGAACCCTGTAACTCAGTACTTACCTGCCAATTGTCGTAAAATGGGCTTCTCGCATAGTTCGGATAAGTTGGTCAAGGTGCGAAATTATCTGGATGCT
GTCAAAGATGATGTAGACCTTGTTTTTGTGGTGGGTGCAATGGCTCATGGGAAAATTGAGACTGATTACACGGATGATCTATTAGCAATTTCTGAATATCCTCTTAGTGC
TAGTTGCTGTATTGCGGATATTTGCAAAGATTTGGCAGAGAAATGGAATGTAGGGTGA
mRNA sequenceShow/hide mRNA sequence
TTTATTATTATTATTTTTTCAGTTTGGGTGCTGATTATGGGCCATGCACTCTAATTCACAGGCCGGATAAGAAAAGACGATAGAGCCCAGCCCATAAATCTGCTAAAGCA
AAAGGTTTCAACTACTCTACAATCAATCTATTCCAAGGGTTTTAGCACTAAGCTTCGACTACCGTCAAGGAAGTTCCTGCTCGGACGAACCATGGTTCGACCATTTGCGG
CGAAGGGGAAGAAGAGAAAGAAGTCGGAGAAATACGACAGAGACGAAGATGCCGAAGAATCCACCTCTCCGTCCAAGAAAGTTATGTTGGAGAACGAACCTGATGAAGAA
CCAGCCAAGGAGGACTTTCATGAACTTGAAGGTATTCCTATTGCTCCGAAAGACCCCAAGAATGATAGCAATGCTGGTGTTATCTTCATCCTTGAAAGAGCTTCTCTGGA
AGTTGCCAAAGTTGGGAAGAATTACCAGCTGTTGAATTCTGATGACCACTCCAATTATTTGCGGAGGAATAACAGAAATCCTGGGGATTATAGACCTGATATCTTGCATC
AAGCGCTTTTGGCGATTTTCGATAGCCGAATTGCAAAGGCTGGAAGATTGAAAGTTGTTTATGTGAAAACTGAGAAAGGTTTATTAATTGAAATTAAACCATACGTTCGT
CTTCCAAGGACGCAGAAACGATTTTATGGAGTTATGTTGCAATTGCTACAAAAGTTAAGCATCACAGCTGCGGGTAAGCGTGAGAAACTCTTTCGGGTGATAAAGAACCC
TGTAACTCAGTACTTACCTGCCAATTGTCGTAAAATGGGCTTCTCGCATAGTTCGGATAAGTTGGTCAAGGTGCGAAATTATCTGGATGCTGTCAAAGATGATGTAGACC
TTGTTTTTGTGGTGGGTGCAATGGCTCATGGGAAAATTGAGACTGATTACACGGATGATCTATTAGCAATTTCTGAATATCCTCTTAGTGCTAGTTGCTGTATTGCGGAT
ATTTGCAAAGATTTGGCAGAGAAATGGAATGTAGGGTGAACTCTGCTTACAACTCCATCAAAATCAGTGCCTCAACTATCTTGTTTCATATGTTTAGTTATTATTTCAGA
AAATATAATCCAGCAGAGTTTTTAGGTTTATTAGTGGAACCATAATAGATCAATATTCCATTTTTTAAATTAAAATATTAATACCTCTTCTAAATTTAATTGAAAGCATA
GAACTTTTAGCTGTAAGAAGTGATTGTACTGAATTTTGTCTGAGTTCTTTGCTGTTATCACTTGTGAAGTAAAAGTTTCAACTTATTTATGTCCATTCAATAGGTTGAAA
TTGAAATCGAGGGTATGTAAGAATTGATCCACGAACTCACTTTTTTTCCCCTTCCA
Protein sequenceShow/hide protein sequence
MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPKDPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDY
RPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKREKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDA
VKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG