| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0053863.1 DNA-directed RNA polymerase V subunit 5A [Cucumis melo var. makuwa] | 7.7e-115 | 96.82 | Show/hide |
Query: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSP+ID SLQQFR+ FGQ+PDVDRLKL AAHHSDPSKRVLVVFCGTGAV
Subjt: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Query: GLEKGQVVKVTYDGDMTRAH
GLEKGQVVKVTYDGDMT AH
Subjt: GLEKGQVVKVTYDGDMTRAH
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| XP_004136650.1 DNA-directed RNA polymerase V subunit 5A [Cucumis sativus] | 3.1e-124 | 100 | Show/hide |
Query: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
Subjt: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Query: GLEKGQVVKVTYDGDMTRAHITYRCVW
GLEKGQVVKVTYDGDMTRAHITYRCVW
Subjt: GLEKGQVVKVTYDGDMTRAHITYRCVW
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| XP_008443287.1 PREDICTED: DNA-directed RNA polymerase V subunit 5A [Cucumis melo] | 4.7e-120 | 96.48 | Show/hide |
Query: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSP+ID SLQQFR+ FGQ+PDVDRLKL AAHHSDPSKRVLVVFCGTGAV
Subjt: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Query: GLEKGQVVKVTYDGDMTRAHITYRCVW
GLEKGQVVKVTYDGDMT AH+TYRCVW
Subjt: GLEKGQVVKVTYDGDMTRAHITYRCVW
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| XP_023539155.1 DNA-directed RNA polymerase V subunit 5A [Cucurbita pepo subsp. pepo] | 6.7e-111 | 88.11 | Show/hide |
Query: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
MEEDGF EPN VE GTCLSSYIDDGTTESHRY+LSRRTV+EML+DRGYTIN +ID +LQQFRE +GQFPDVDRLKLSAAH +DPSKR+LV+FCGTGAV
Subjt: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
KV+AIRNIAGQI NK++LHGLILIVQNQITNQAMKAVE+FSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLL+QYSIEEKQLPRMLRTDAIARYY
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Query: GLEKGQVVKVTYDGDMTRAHITYRCVW
GLEKGQ+VKVTYDGDMTR+H+TYRCVW
Subjt: GLEKGQVVKVTYDGDMTRAHITYRCVW
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| XP_038903402.1 DNA-directed RNA polymerase V subunit 5A [Benincasa hispida] | 1.9e-113 | 90.75 | Show/hide |
Query: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
MEEDGFE EPN VEFGTCLSSYID+GTTESHRYFLSRRTV+EML+DRGYT+NS +ID SLQQFRE +GQ PDVDRLKLSA H SDPSKRVLV+FCGTGAV
Subjt: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVL+EEEKQKLL+QYSIEEKQLPRMLR DA+ARYY
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Query: GLEKGQVVKVTYDGDMTRAHITYRCVW
GLEKGQVVKVTYDGDMTR+H+TYRCVW
Subjt: GLEKGQVVKVTYDGDMTRAHITYRCVW
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LCG9 Uncharacterized protein | 1.5e-124 | 100 | Show/hide |
Query: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
Subjt: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Query: GLEKGQVVKVTYDGDMTRAHITYRCVW
GLEKGQVVKVTYDGDMTRAHITYRCVW
Subjt: GLEKGQVVKVTYDGDMTRAHITYRCVW
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| A0A1S3B7M5 DNA-directed RNA polymerase V subunit 5A | 2.3e-120 | 96.48 | Show/hide |
Query: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSP+ID SLQQFR+ FGQ+PDVDRLKL AAHHSDPSKRVLVVFCGTGAV
Subjt: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Query: GLEKGQVVKVTYDGDMTRAHITYRCVW
GLEKGQVVKVTYDGDMT AH+TYRCVW
Subjt: GLEKGQVVKVTYDGDMTRAHITYRCVW
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| A0A5D3DQJ3 DNA-directed RNA polymerase V subunit 5A | 3.7e-115 | 96.82 | Show/hide |
Query: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSP+ID SLQQFR+ FGQ+PDVDRLKL AAHHSDPSKRVLVVFCGTGAV
Subjt: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Query: GLEKGQVVKVTYDGDMTRAH
GLEKGQVVKVTYDGDMT AH
Subjt: GLEKGQVVKVTYDGDMTRAH
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| A0A6J1GH86 DNA-directed RNA polymerase V subunit 5A isoform X2 | 2.8e-110 | 87.67 | Show/hide |
Query: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
MEEDGF EPN VE GTCLSSYIDDGTTESHRY+LSRRTV+EML+DRGYTIN +ID +LQQFRE +GQF DVDRLKLSAAH +DPSKR+LV+FCGTGAV
Subjt: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
KV+AIRNIAGQI NK++LHGLILIVQNQITNQAMKAVE+FSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLL+QYSIEEKQLPRMLRTDAIARYY
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Query: GLEKGQVVKVTYDGDMTRAHITYRCVW
GLEKGQ+VKVTYDGDMTR+H+TYRCVW
Subjt: GLEKGQVVKVTYDGDMTRAHITYRCVW
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| A0A6J1I733 DNA-directed RNA polymerase V subunit 5A isoform X2 | 1.6e-110 | 87.67 | Show/hide |
Query: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
MEEDGF EPN VE GTCLSSYIDDGTTESHRY+LSRRTV+EML+DRGYTIN +ID +LQQFRE +GQFPDVDRLKLSAAH +DPSKR+LV+FCGTGAV
Subjt: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
KV+AIRNIAGQI NK++LHGLILIVQNQITNQAMKAVE+FSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLL+QYSIEEKQLPRMLRTDAIARYY
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Query: GLEKGQVVKVTYDGDMTRAHITYRCVW
LEKGQ+VKVTYDGDMTR+H+TYRCVW
Subjt: GLEKGQVVKVTYDGDMTRAHITYRCVW
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| A8XGH1 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 3.6e-30 | 34.93 | Show/hide |
Query: DGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDR-----LKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLH
D E++R + R+TV++M+ DRGY + +D L+ F+ETFG P + L + AH+ DP+ ++ V F + + I+ I Q+ + ++
Subjt: DGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDR-----LKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLH
Query: GLILIVQNQITNQAMKAVELFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMT
I++VQ +T A +++ + + +E F +L+VNIT+H L P H V+T EEK +LL +Y +++ QLPR+ + D +ARY+GL +GQVVK+ +
Subjt: GLILIVQNQITNQAMKAVELFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMT
Query: RAHITYRCV
+ITYR V
Subjt: RAHITYRCV
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| Q9M1H8 DNA-directed RNA polymerase V subunit 5C | 5.3e-50 | 43.36 | Show/hide |
Query: EEDGFEAEPNPVEFGT-CLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
EE E + + GT C+S D G ES R++L+R T EML+DRGY +N + +L +FR FG+ P+++RL++ SDP K++LVVF GT +
Subjt: EEDGFEAEPNPVEFGT-CLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
V ++R + QI+N LH +IL++Q+++ + A KA+ F F VE F I DLLVNITKH +P ++L +EEK++LL+++++E+KQLP + D+ RYY
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Query: GLEKGQVVKVTYDGDMTRAHITYRCV
GL+K QVVK+TY + +TYRC+
Subjt: GLEKGQVVKVTYDGDMTRAHITYRCV
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| Q9M1J2 DNA-directed RNA polymerase V subunit 5A | 1.8e-74 | 61.9 | Show/hide |
Query: CLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDS
CLS Y+D + ESHRY+L+RR ++ML+DRGY ++ +I+ SL FR +G+ PDVDRL++SA H SD +K+V +VF GT VKVNAIR++ I ++++
Subjt: CLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDS
Query: LHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMT
+ GLIL++QN +TNQA+KA+ELFSFKVEIFQITDLLVNITKH+LKP HQVL +EEK LLK++SIEEKQLPR+ + DAI RYYGLEKGQVVKV Y G++T
Subjt: LHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMT
Query: RAHITYRCVW
+H+ +RCVW
Subjt: RAHITYRCVW
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| Q9N5K2 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 1.5e-28 | 33.49 | Show/hide |
Query: DGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDR-----LKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLH
D E++R + R+TV++M+ DRGY + +D L+ F+ +G P + L + AH+ DP+ ++ V F + + I+ I Q+ + ++
Subjt: DGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDR-----LKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLH
Query: GLILIVQNQITNQAMKAVELFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMT
I++VQ +T A +++ + + +E F +L+VNIT+H L P H V+T EEK +LL +Y +++ QLPR+ + D +ARY+GL +GQVVK+ +
Subjt: GLILIVQNQITNQAMKAVELFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMT
Query: RAHITYRCV
+ITYR V
Subjt: RAHITYRCV
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| Q9ZVB9 DNA-directed RNA polymerases IV and V subunit 5B | 5.1e-69 | 59.31 | Show/hide |
Query: IDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLHGLI
I + E H+Y+L+RRT +EML+DRGY ++ +I+ SLQQFR +G+ PDVD L++SA H D SK++ VVFCGTG VKVNA+R IA + +++++ GLI
Subjt: IDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLHGLI
Query: LIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRAHIT
L++Q+ ITNQA+KAVELFSFKVE+F+ITDLLVN++KH L+P HQVL ++EK+ LLK++SIEEKQLPR+ D I RYYGLE GQV+KVTY +++ +H+T
Subjt: LIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRAHIT
Query: YRCV
YRCV
Subjt: YRCV
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G41340.1 RNA polymerase II fifth largest subunit, D | 3.6e-70 | 59.31 | Show/hide |
Query: IDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLHGLI
I + E H+Y+L+RRT +EML+DRGY ++ +I+ SLQQFR +G+ PDVD L++SA H D SK++ VVFCGTG VKVNA+R IA + +++++ GLI
Subjt: IDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLHGLI
Query: LIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRAHIT
L++Q+ ITNQA+KAVELFSFKVE+F+ITDLLVN++KH L+P HQVL ++EK+ LLK++SIEEKQLPR+ D I RYYGLE GQV+KVTY +++ +H+T
Subjt: LIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRAHIT
Query: YRCV
YRCV
Subjt: YRCV
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| AT3G22320.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 6.9e-29 | 36 | Show/hide |
Query: ESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLHGLILIVQNQ
E R + ++T+++ML+DRGY I + + QQF G + L A +D S ++ + F V V ++ ++ +++ IL+VQ
Subjt: ESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLHGLILIVQNQ
Query: ITNQAMKAVELFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRAHITYRCV
+T A + S F +E+FQ ++LVNI +H L P HQVLT EEK+ LL++Y+++E QLPR+ TD IARY+GL++GQVVK+ + ++TYR V
Subjt: ITNQAMKAVELFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRAHITYRCV
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| AT3G54490.1 RNA polymerase II fifth largest subunit, E | 3.7e-51 | 43.36 | Show/hide |
Query: EEDGFEAEPNPVEFGT-CLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
EE E + + GT C+S D G ES R++L+R T EML+DRGY +N + +L +FR FG+ P+++RL++ SDP K++LVVF GT +
Subjt: EEDGFEAEPNPVEFGT-CLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
V ++R + QI+N LH +IL++Q+++ + A KA+ F F VE F I DLLVNITKH +P ++L +EEK++LL+++++E+KQLP + D+ RYY
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Query: GLEKGQVVKVTYDGDMTRAHITYRCV
GL+K QVVK+TY + +TYRC+
Subjt: GLEKGQVVKVTYDGDMTRAHITYRCV
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| AT3G57080.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 1.3e-75 | 61.9 | Show/hide |
Query: CLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDS
CLS Y+D + ESHRY+L+RR ++ML+DRGY ++ +I+ SL FR +G+ PDVDRL++SA H SD +K+V +VF GT VKVNAIR++ I ++++
Subjt: CLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDS
Query: LHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMT
+ GLIL++QN +TNQA+KA+ELFSFKVEIFQITDLLVNITKH+LKP HQVL +EEK LLK++SIEEKQLPR+ + DAI RYYGLEKGQVVKV Y G++T
Subjt: LHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMT
Query: RAHITYRCVW
+H+ +RCVW
Subjt: RAHITYRCVW
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| AT5G57980.1 RNA polymerase II fifth largest subunit, C | 3.2e-26 | 34.3 | Show/hide |
Query: IDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQF---PDVDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLH
+ D E R F RRTV++ML+DRGYTI +++ ++F + F + + + L +SA +P+ ++ V + V V I+ D +H
Subjt: IDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQF---PDVDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLH
Query: GLILIVQNQITNQAMKAVELFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMT
I++V IT A AV + +E+F+ +L+ NIT+H L + VL ++ K+KLL Y++++ QLPR+L TD +ARYYGL++GQVVK+ +
Subjt: GLILIVQNQITNQAMKAVELFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMT
Query: RAHITYR
+ TYR
Subjt: RAHITYR
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