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CSPI03G38120 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G38120
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionATP-dependent RNA helicase DBP3-like
Genome locationChr3:32988161..32988579
RNA-Seq ExpressionCSPI03G38120
SyntenyCSPI03G38120
Gene Ontology termsGO:0004386 - helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016899655.1 PREDICTED: ATP-dependent RNA helicase DBP3-like [Cucumis melo]5.4e-2383.65Show/hide
Query:  MAGIMKKIQETVQSHKKQHDGENGAHEGVGIVEKIKEKIHGYKEKNKEKKKQRKERKEKKEKEKKEKKAKQKAEEEEEEEEEDGGEDGGESSDGDSDDSG
        MAGIMKKI+ETVQSHKKQHDGENGA EG GIVEK+KEKIHGYKEKNKEKKKQRKERKEKKEKE KEKKAK KAE           EDGGESSDGDSDDSG
Subjt:  MAGIMKKIQETVQSHKKQHDGENGAHEGVGIVEKIKEKIHGYKEKNKEKKKQRKERKEKKEKEKKEKKAKQKAEEEEEEEEEDGGEDGGESSDGDSDDSG

Query:  GGSD
        GGSD
Subjt:  GGSD
XP_031737596.1 dehydrin HIRD11-like [Cucumis sativus]4.6e-3092.31Show/hide
Query:  MAGIMKKIQETVQSHKKQHDGENGAHEGVGIVEKIKEKIHGYKEKNKEKKKQRKERKEKKEKEKKEKKAKQKAEEEEEEEEEDGGEDGGESSDGDSDDSG
        MAGIMKKIQETVQSHKKQHDGENGAHEGVGIVEK+KEKIHGYKEKNKEKKKQRKERKEKKEKEKKEKKAKQKAEE EEE      EDGGESSDGDSDDSG
Subjt:  MAGIMKKIQETVQSHKKQHDGENGAHEGVGIVEKIKEKIHGYKEKNKEKKKQRKERKEKKEKEKKEKKAKQKAEEEEEEEEEDGGEDGGESSDGDSDDSG

Query:  GGSD
        GGSD
Subjt:  GGSD
TrEMBL top hitse value%identityAlignment
A0A0A0LCI3 Uncharacterized protein2.2e-3092.31Show/hide
Query:  MAGIMKKIQETVQSHKKQHDGENGAHEGVGIVEKIKEKIHGYKEKNKEKKKQRKERKEKKEKEKKEKKAKQKAEEEEEEEEEDGGEDGGESSDGDSDDSG
        MAGIMKKIQETVQSHKKQHDGENGAHEGVGIVEK+KEKIHGYKEKNKEKKKQRKERKEKKEKEKKEKKAKQKAEE EEE      EDGGESSDGDSDDSG
Subjt:  MAGIMKKIQETVQSHKKQHDGENGAHEGVGIVEKIKEKIHGYKEKNKEKKKQRKERKEKKEKEKKEKKAKQKAEEEEEEEEEDGGEDGGESSDGDSDDSG

Query:  GGSD
        GGSD
Subjt:  GGSD
A0A1S4DVB9 ATP-dependent RNA helicase DBP3-like2.6e-2383.65Show/hide
Query:  MAGIMKKIQETVQSHKKQHDGENGAHEGVGIVEKIKEKIHGYKEKNKEKKKQRKERKEKKEKEKKEKKAKQKAEEEEEEEEEDGGEDGGESSDGDSDDSG
        MAGIMKKI+ETVQSHKKQHDGENGA EG GIVEK+KEKIHGYKEKNKEKKKQRKERKEKKEKE KEKKAK KAE           EDGGESSDGDSDDSG
Subjt:  MAGIMKKIQETVQSHKKQHDGENGAHEGVGIVEKIKEKIHGYKEKNKEKKKQRKERKEKKEKEKKEKKAKQKAEEEEEEEEEDGGEDGGESSDGDSDDSG

Query:  GGSD
        GGSD
Subjt:  GGSD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGGAATAATGAAGAAGATCCAGGAAACAGTGCAGAGCCATAAGAAGCAACACGATGGGGAGAATGGAGCTCATGAAGGAGTTGGGATTGTGGAGAAGATTAAGGA
GAAGATCCATGGTTACAAAGAGAAAAACAAAGAGAAGAAGAAGCAAAGGAAGGAGAGGAAGGAGAAAAAAGAAAAAGAGAAGAAGGAGAAAAAAGCCAAACAAAAAGCAG
AAGAAGAAGAAGAAGAAGAAGAAGAAGATGGGGGTGAAGATGGGGGTGAAAGCAGCGATGGCGATAGTGACGACAGTGGTGGCGGGAGCGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGGAATAATGAAGAAGATCCAGGAAACAGTGCAGAGCCATAAGAAGCAACACGATGGGGAGAATGGAGCTCATGAAGGAGTTGGGATTGTGGAGAAGATTAAGGA
GAAGATCCATGGTTACAAAGAGAAAAACAAAGAGAAGAAGAAGCAAAGGAAGGAGAGGAAGGAGAAAAAAGAAAAAGAGAAGAAGGAGAAAAAAGCCAAACAAAAAGCAG
AAGAAGAAGAAGAAGAAGAAGAAGAAGATGGGGGTGAAGATGGGGGTGAAAGCAGCGATGGCGATAGTGACGACAGTGGTGGCGGGAGCGACTAATAAGTACTGTGTGTC
TTAGCGTTTCGTCCTTTCTTCTTCTTCTCCTTTTCGATTCCTTTTTAGCTTTATGTTAGAATAATATTGCATGATTAAATATGGATCGG
Protein sequenceShow/hide protein sequence
MAGIMKKIQETVQSHKKQHDGENGAHEGVGIVEKIKEKIHGYKEKNKEKKKQRKERKEKKEKEKKEKKAKQKAEEEEEEEEEDGGEDGGESSDGDSDDSGGGSD