; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G39610 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G39610
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionHMA domain-containing protein
Genome locationChr3:33986049..33988746
RNA-Seq ExpressionCSPI03G39610
SyntenyCSPI03G39610
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581006.1 hypothetical protein SDJN03_21008, partial [Cucurbita argyrosperma subsp. sororia]4.2e-6377.3Show/hide
Query:  MASISTFPALHF----PFSKSSPIPSHSFSLPSPTNFTLSAASFRHSPLQGRSLPRVLRQVRAVEEDASVPELGVESEASSPSPSDPPAVTVPVSPSDVL
        MASIS FPALH       +  SPI   SF+LPS ++FT+SAASFRHS ++GRS  R L+QVR VEEDAS+PE GVE EA SPSPS+ PAVTVPVS SD+L
Subjt:  MASISTFPALHF----PFSKSSPIPSHSFSLPSPTNFTLSAASFRHSPLQGRSLPRVLRQVRAVEEDASVPELGVESEASSPSPSDPPAVTVPVSPSDVL

Query:  TMFFQAEGTLNESAIPSVTGALEQTEGISGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
        TMFFQAEGTLNESA+PSVT ALEQT+GI+GLKVQ+VEGIASV LTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFED+EEVFV
Subjt:  TMFFQAEGTLNESAIPSVTGALEQTEGISGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV

XP_004147445.1 uncharacterized protein LOC101219347 [Cucumis sativus]2.4e-8799.45Show/hide
Query:  MASISTFPALHFPFSKSSPIPSHSFSLPSPTNFTLSAASFRHSPLQGRSLPRVLRQVRAVEEDASVPELGVESEASSPSPSDPPAVTVPVSPSDVLTMFF
        MASISTFPALHFPFSKSSPIPSHSFSLPSPTNFTLSAASFRHSPLQGRSLPRVL+QVRAVEEDASVPELGVESEASSPSPSDPPAVTVPVSPSDVLTMFF
Subjt:  MASISTFPALHFPFSKSSPIPSHSFSLPSPTNFTLSAASFRHSPLQGRSLPRVLRQVRAVEEDASVPELGVESEASSPSPSDPPAVTVPVSPSDVLTMFF

Query:  QAEGTLNESAIPSVTGALEQTEGISGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
        QAEGTLNESAIPSVTGALEQTEGISGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
Subjt:  QAEGTLNESAIPSVTGALEQTEGISGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV

XP_008443474.1 PREDICTED: uncharacterized protein LOC103487059 isoform X1 [Cucumis melo]4.2e-7991.71Show/hide
Query:  MASISTFPALHFPFSKSSPIPSHSFSLPSPTNFTLSAASFRHSPLQGRSLPRVLRQVRAVEEDASVPELGVESEASSPSPSDPPAVTVPVSPSDVLTMFF
        MASISTFPALH PF  SSP+P  SFSLPS TNFTLSAASFRHSP+QGRSLPR L+QVRAVEEDASVPELGVE+EASSPSPSDPPAVTVPVSPSDVLTMFF
Subjt:  MASISTFPALHFPFSKSSPIPSHSFSLPSPTNFTLSAASFRHSPLQGRSLPRVLRQVRAVEEDASVPELGVESEASSPSPSDPPAVTVPVSPSDVLTMFF

Query:  QAEGTLNESAIPSVTGALEQTEGISGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
        QAEGTLNESAIPSVT ALEQTEGI+GLKVQV EGIASV LTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
Subjt:  QAEGTLNESAIPSVTGALEQTEGISGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV

XP_023526965.1 uncharacterized protein LOC111790332 [Cucurbita pepo subsp. pepo]1.6e-6275.68Show/hide
Query:  MASISTFPALHF----PFSKSSPIPSHSFSLPSPTNFTLSAASFRHSPLQGRSLPRVLRQVRAVEEDASVPELGVESEASSPSPSDPPAVTVPVSPSDVL
        MASIS FPALH       +  SPI    F+LPS ++FT+SAASFRHS ++GRS PR L+Q R VEEDAS+PE GVE E  SPSPS+ PAVTVPVS SD+L
Subjt:  MASISTFPALHF----PFSKSSPIPSHSFSLPSPTNFTLSAASFRHSPLQGRSLPRVLRQVRAVEEDASVPELGVESEASSPSPSDPPAVTVPVSPSDVL

Query:  TMFFQAEGTLNESAIPSVTGALEQTEGISGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
        TMFFQAEGTLNESA+PSVT ALEQT+GI+GLKVQ+VEGIASV LTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFED+EEVF+
Subjt:  TMFFQAEGTLNESAIPSVTGALEQTEGISGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV

XP_038903053.1 uncharacterized protein LOC120089747 [Benincasa hispida]3.4e-6580.75Show/hide
Query:  MASI-STFPALH----FPFSKSSPIPSHSFSLPSPTNFTLSAA-SFRHSPLQGRSLPRVLRQVRAVEEDASVPELGVESEASSPSPSDPPAVTVPVSPSD
        MASI STFPALH      F   SPIP  SFSLPS TNFTL+AA SF HSP+ GRS  R L+Q +AVEEDAS+PE GVE E  SPSPSD PAVTVPVSPSD
Subjt:  MASI-STFPALH----FPFSKSSPIPSHSFSLPSPTNFTLSAA-SFRHSPLQGRSLPRVLRQVRAVEEDASVPELGVESEASSPSPSDPPAVTVPVSPSD

Query:  VLTMFFQAEGTLNESAIPSVTGALEQTEGISGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
        +LTMFFQAEGTLNESAIP+VT ALEQTEGI+GLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFED+EE FV
Subjt:  VLTMFFQAEGTLNESAIPSVTGALEQTEGISGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV

TrEMBL top hitse value%identityAlignment
A0A0A0LC88 HMA domain-containing protein1.2e-8799.45Show/hide
Query:  MASISTFPALHFPFSKSSPIPSHSFSLPSPTNFTLSAASFRHSPLQGRSLPRVLRQVRAVEEDASVPELGVESEASSPSPSDPPAVTVPVSPSDVLTMFF
        MASISTFPALHFPFSKSSPIPSHSFSLPSPTNFTLSAASFRHSPLQGRSLPRVL+QVRAVEEDASVPELGVESEASSPSPSDPPAVTVPVSPSDVLTMFF
Subjt:  MASISTFPALHFPFSKSSPIPSHSFSLPSPTNFTLSAASFRHSPLQGRSLPRVLRQVRAVEEDASVPELGVESEASSPSPSDPPAVTVPVSPSDVLTMFF

Query:  QAEGTLNESAIPSVTGALEQTEGISGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
        QAEGTLNESAIPSVTGALEQTEGISGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
Subjt:  QAEGTLNESAIPSVTGALEQTEGISGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV

A0A1S3B868 uncharacterized protein LOC103487059 isoform X12.0e-7991.71Show/hide
Query:  MASISTFPALHFPFSKSSPIPSHSFSLPSPTNFTLSAASFRHSPLQGRSLPRVLRQVRAVEEDASVPELGVESEASSPSPSDPPAVTVPVSPSDVLTMFF
        MASISTFPALH PF  SSP+P  SFSLPS TNFTLSAASFRHSP+QGRSLPR L+QVRAVEEDASVPELGVE+EASSPSPSDPPAVTVPVSPSDVLTMFF
Subjt:  MASISTFPALHFPFSKSSPIPSHSFSLPSPTNFTLSAASFRHSPLQGRSLPRVLRQVRAVEEDASVPELGVESEASSPSPSDPPAVTVPVSPSDVLTMFF

Query:  QAEGTLNESAIPSVTGALEQTEGISGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
        QAEGTLNESAIPSVT ALEQTEGI+GLKVQV EGIASV LTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
Subjt:  QAEGTLNESAIPSVTGALEQTEGISGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV

A0A5A7UJN3 HMA domain-containing protein2.5e-6183.83Show/hide
Query:  SKSSPIPSHSFSLPSPTNFTLSAASFRHSPLQGRSLPRVLRQVRAVEEDASVPELGVESEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSV
        S  S   S S  +PSP +        RHSP+QGRSLPR L+QVRAVEEDASVPELGVE+EASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSV
Subjt:  SKSSPIPSHSFSLPSPTNFTLSAASFRHSPLQGRSLPRVLRQVRAVEEDASVPELGVESEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSV

Query:  TGALEQTEGISGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
        T ALEQTEGI+GLKVQV EGIASV LTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
Subjt:  TGALEQTEGISGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV

A0A5D3D1F9 Heavy-metal-associated domain-containing protein2.0e-7991.71Show/hide
Query:  MASISTFPALHFPFSKSSPIPSHSFSLPSPTNFTLSAASFRHSPLQGRSLPRVLRQVRAVEEDASVPELGVESEASSPSPSDPPAVTVPVSPSDVLTMFF
        MASISTFPALH PF  SSP+P  SFSLPS TNFTLSAASFRHSP+QGRSLPR L+QVRAVEEDASVPELGVE+EASSPSPSDPPAVTVPVSPSDVLTMFF
Subjt:  MASISTFPALHFPFSKSSPIPSHSFSLPSPTNFTLSAASFRHSPLQGRSLPRVLRQVRAVEEDASVPELGVESEASSPSPSDPPAVTVPVSPSDVLTMFF

Query:  QAEGTLNESAIPSVTGALEQTEGISGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
        QAEGTLNESAIPSVT ALEQTEGI+GLKVQV EGIASV LTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
Subjt:  QAEGTLNESAIPSVTGALEQTEGISGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV

A0A6J1F3X5 uncharacterized protein LOC1114419461.3e-6276.76Show/hide
Query:  MASISTFPALHF----PFSKSSPIPSHSFSLPSPTNFTLSAASFRHSPLQGRSLPRVLRQVRAVEEDASVPELGVESEASSPSPSDPPAVTVPVSPSDVL
        MASIS FPALH       +  SPI   SF+LPS ++FT+SAASF HS ++GRS  R L+QVR VEEDAS+PE GVE EA SPSPS+ PAVTVPVS SD+L
Subjt:  MASISTFPALHF----PFSKSSPIPSHSFSLPSPTNFTLSAASFRHSPLQGRSLPRVLRQVRAVEEDASVPELGVESEASSPSPSDPPAVTVPVSPSDVL

Query:  TMFFQAEGTLNESAIPSVTGALEQTEGISGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
        TMFFQAEGTLNESA+PSVT ALEQT+GI+GLKVQ+VEGIASV LTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFED+EEVFV
Subjt:  TMFFQAEGTLNESAIPSVTGALEQTEGISGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G14910.1 Heavy metal transport/detoxification superfamily protein1.3e-3350Show/hide
Query:  MASISTFPALHFPFSKSSPIPSHSFSLPSPTNFTLSAASFRHSPLQGRSLPRVLRQVR-AVEEDASVPELGVESEASSPSPSDPPAVTVPVSPSDVLTMF
        MASI+     H      SP  S +  LP   N      +  +S  +  S    ++Q R  + + +S+ E G     +   P +   V+VPVSPSD+LTMF
Subjt:  MASISTFPALHFPFSKSSPIPSHSFSLPSPTNFTLSAASFRHSPLQGRSLPRVLRQVR-AVEEDASVPELGVESEASSPSPSDPPAVTVPVSPSDVLTMF

Query:  FQAEGTLNESAIPSVTGALEQTEGISGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
        FQA+GTLNE+AIP+VT AL+  +G+S LKVQV EG+A V L KQTT+Q+TGVAS+L+ETIQGAGFKLQTLNLSFED++EV V
Subjt:  FQAEGTLNESAIPSVTGALEQTEGISGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAATCTCCACCTTCCCCGCCCTTCACTTTCCATTTTCAAAATCATCACCAATTCCCAGCCATTCCTTCTCTCTTCCTTCCCCCACGAACTTCACTCTCTCTGC
CGCCTCCTTCAGACATTCTCCGCTTCAGGGCCGGAGCCTGCCACGCGTCCTCAGACAAGTCAGGGCAGTTGAAGAGGATGCCTCTGTTCCCGAGCTAGGAGTTGAAAGCG
AAGCGTCGTCACCTTCTCCATCTGACCCGCCTGCCGTCACCGTCCCCGTCTCCCCCTCTGATGTTCTCACCATGTTCTTTCAGGCAGAGGGGACGCTAAATGAATCAGCT
ATTCCTTCTGTAACTGGGGCTTTGGAGCAAACGGAGGGTATTTCCGGGTTGAAAGTCCAAGTCGTTGAGGGCATTGCATCAGTTGCGCTTACAAAACAAACAACAATACA
ATCTACAGGAGTGGCCTCGAGTTTGATCGAGACCATTCAAGGTGCAGGTTTTAAGTTACAAACCTTGAATTTGAGTTTTGAGGATGAGGAAGAAGTTTTTGTTTAG
mRNA sequenceShow/hide mRNA sequence
AAGAAAAATCATATGTTATTTAAATAAGTAAATAGAGAAGAAGAAAAAAAAGGTTTGAAAGAGGGGAGTGAGTGTAGCGGATAAGCAGAGGATAGGAATCCCAAAATTCA
CAAACACAAAACACACTCAAACCGTCGAGGAAAATGGCTTCAATCTCCACCTTCCCCGCCCTTCACTTTCCATTTTCAAAATCATCACCAATTCCCAGCCATTCCTTCTC
TCTTCCTTCCCCCACGAACTTCACTCTCTCTGCCGCCTCCTTCAGACATTCTCCGCTTCAGGGCCGGAGCCTGCCACGCGTCCTCAGACAAGTCAGGGCAGTTGAAGAGG
ATGCCTCTGTTCCCGAGCTAGGAGTTGAAAGCGAAGCGTCGTCACCTTCTCCATCTGACCCGCCTGCCGTCACCGTCCCCGTCTCCCCCTCTGATGTTCTCACCATGTTC
TTTCAGGCAGAGGGGACGCTAAATGAATCAGCTATTCCTTCTGTAACTGGGGCTTTGGAGCAAACGGAGGGTATTTCCGGGTTGAAAGTCCAAGTCGTTGAGGGCATTGC
ATCAGTTGCGCTTACAAAACAAACAACAATACAATCTACAGGAGTGGCCTCGAGTTTGATCGAGACCATTCAAGGTGCAGGTTTTAAGTTACAAACCTTGAATTTGAGTT
TTGAGGATGAGGAAGAAGTTTTTGTTTAGGTACTCTTGATTGTGAAGTGTAAGAATTGGAGAGAGGGAAAGAGAGAAAAATCTGGAGATAGATAAGGTAGGGAAGCTTAA
TTAAGAGCTCCATTGATCATTTCACGGAAGATTAGACAATGCAGATGGTGAAAACCTACCATTTCCAAAATGCCCTCAAAGTGCTTAAATGTATCAGGTTTGATGAGATT
AATCTTTTGCCATTGCTTGATTTTTGTGTATGAACTGTGGGGTTAAAGTTTTCTTTATCTTTAGACCATTAGAATAGAAATATGGAATGTCATTAAACCAAATGGCCATT
TGTTTTTTAAATCAATCCCTTTTCTTGCATACTGCATTATAGTGTCATTTATTTTGTGGGAATCTTGGATGGTACCCAAAACATGGTATAGTATGTGGTGAAATTAACGT
CTTAAATTAGTAATGGGTG
Protein sequenceShow/hide protein sequence
MASISTFPALHFPFSKSSPIPSHSFSLPSPTNFTLSAASFRHSPLQGRSLPRVLRQVRAVEEDASVPELGVESEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESA
IPSVTGALEQTEGISGLKVQVVEGIASVALTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV