; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G40520 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G40520
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptiondouble-stranded RNA-binding protein 1-like
Genome locationChr3:34704816..34710955
RNA-Seq ExpressionCSPI03G40520
SyntenyCSPI03G40520
Gene Ontology termsGO:0003725 - double-stranded RNA binding (molecular function)
InterPro domainsIPR014720 - Double-stranded RNA-binding domain
IPR044450 - AtDRB-like, first double-stranded RNA binding domain, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057203.1 double-stranded RNA-binding protein 1 isoform X1 [Cucumis melo var. makuwa]5.6e-14793.68Show/hide
Query:  MSNMDVKFTAQSVEPRIQNTNKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENA
        MSNMDVKF  QSVEP+I NT+KSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKR LTLPMYTCERDGPPHASRFRCKVEIDGKTY S EFHGTLKDAENA
Subjt:  MSNMDVKFTAQSVEPRIQNTNKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENA

Query:  VAKVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRKR
        VAKVALM LCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVA+FTIKEGSQSISTRKR
Subjt:  VAKVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRKR

Query:  APSCDLALEVPCDIATSSHNVAQPGQSKDYVSRIVSRLEAGKSSSSKRIFVCPRQPNMTIPKESSVLPISDDQWVAFSFETGPSQ
        APSCDLA+EVP  IATSSHNVAQPG+S DYVSRIVS+LEAGKSSSSKRIFVCPRQPNMTIPKESSVLPISDDQWVAFS ETG SQ
Subjt:  APSCDLALEVPCDIATSSHNVAQPGQSKDYVSRIVSRLEAGKSSSSKRIFVCPRQPNMTIPKESSVLPISDDQWVAFSFETGPSQ

XP_004141127.1 double-stranded RNA-binding protein 1 [Cucumis sativus]3.5e-15799.3Show/hide
Query:  MSNMDVKFTAQSVEPRIQNTNKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENA
        MSNMDVKFTAQSVEPRIQNTNKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENA
Subjt:  MSNMDVKFTAQSVEPRIQNTNKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENA

Query:  VAKVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRKR
        VAKVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRKR
Subjt:  VAKVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRKR

Query:  APSCDLALEVPCDIATSSHNVAQPGQSKDYVSRIVSRLEAGKSSSSKRIFVCPRQPNMTIPKESSVLPISDDQWVAFSFETGPSQ
        APSCDLALE+P DIATSSHNVAQPGQSKDYVSRIVSRLEAGKSSSSKRIFVCPRQPNMTIPKESSVLPISDDQWVAFSFETGPSQ
Subjt:  APSCDLALEVPCDIATSSHNVAQPGQSKDYVSRIVSRLEAGKSSSSKRIFVCPRQPNMTIPKESSVLPISDDQWVAFSFETGPSQ

XP_008464954.1 PREDICTED: double-stranded RNA-binding protein 1 isoform X1 [Cucumis melo]5.6e-14793.68Show/hide
Query:  MSNMDVKFTAQSVEPRIQNTNKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENA
        MSNMDVKF  QSVEP+I NT+KSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKR LTLPMYTCERDGPPHASRFRCKVEIDGKTY S EFHGTLKDAENA
Subjt:  MSNMDVKFTAQSVEPRIQNTNKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENA

Query:  VAKVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRKR
        VAKVALM LCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVA+FTIKEGSQSISTRKR
Subjt:  VAKVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRKR

Query:  APSCDLALEVPCDIATSSHNVAQPGQSKDYVSRIVSRLEAGKSSSSKRIFVCPRQPNMTIPKESSVLPISDDQWVAFSFETGPSQ
        APSCDLA+EVP  IATSSHNVAQPG+S DYVSRIVS+LEAGKSSSSKRIFVCPRQPNMTIPKESSVLPISDDQWVAFS ETG SQ
Subjt:  APSCDLALEVPCDIATSSHNVAQPGQSKDYVSRIVSRLEAGKSSSSKRIFVCPRQPNMTIPKESSVLPISDDQWVAFSFETGPSQ

XP_008464955.1 PREDICTED: double-stranded RNA-binding protein 1 isoform X2 [Cucumis melo]1.8e-12985.31Show/hide
Query:  MSNMDVKFTA-QSVEPRIQNTNKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAEN
        ++N+D K T+    E +++  NKS  +++  K      GMQHLYKNKLQNFSQKR LTLPMYTCERDGPPHASRFRCKVEIDGKTY S EFHGTLKDAEN
Subjt:  MSNMDVKFTA-QSVEPRIQNTNKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAEN

Query:  AVAKVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRK
        AVAKVALM LCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVA+FTIKEGSQSISTRK
Subjt:  AVAKVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRK

Query:  RAPSCDLALEVPCDIATSSHNVAQPGQSKDYVSRIVSRLEAGKSSSSKRIFVCPRQPNMTIPKESSVLPISDDQWVAFSFETGPSQ
        RAPSCDLA+EVP  IATSSHNVAQPG+S DYVSRIVS+LEAGKSSSSKRIFVCPRQPNMTIPKESSVLPISDDQWVAFS ETG SQ
Subjt:  RAPSCDLALEVPCDIATSSHNVAQPGQSKDYVSRIVSRLEAGKSSSSKRIFVCPRQPNMTIPKESSVLPISDDQWVAFSFETGPSQ

XP_038904852.1 double-stranded RNA-binding protein 1-like isoform X1 [Benincasa hispida]3.2e-12673.51Show/hide
Query:  MSNMDVKFTAQSVEPRIQNTNKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENA
        MSNMDVKF AQ VEP+IQNT+KSPVVEDFDKECLKLTGMQHLYKNKLQN +QKRGL+LPMYTCERDGPPHASRFRCKVEIDGKTYES EFHGTLKDAENA
Subjt:  MSNMDVKFTAQSVEPRIQNTNKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENA

Query:  VAKVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKE----------
        VAKVAL+SLCQDGAQE  DSGLYKNLLQEMAQK GLGLP YSTSQSGEVHVPVFVSTVKVGEE  EGKPSRTKKQAEMSAAKVAYFTIKE          
Subjt:  VAKVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKE----------

Query:  ----------------------------------------GSQSISTRKRAPSCDLALEVPCDIATSSHNVAQPGQSKDYVSR-IVSRLEAGKSSSSKRI
                                                GSQSISTRKRAPSCDL +E   DIA SSHNVA  G+S DYVS  +VS+LEAGKSSSSKR+
Subjt:  ----------------------------------------GSQSISTRKRAPSCDLALEVPCDIATSSHNVAQPGQSKDYVSR-IVSRLEAGKSSSSKRI

Query:  FVCPRQPNMTIPKESSVLPISDDQWVAFSFETGPSQ
         VCPRQPNMT PK ++VLPISDD+WV FS ETG SQ
Subjt:  FVCPRQPNMTIPKESSVLPISDDQWVAFSFETGPSQ

TrEMBL top hitse value%identityAlignment
A0A0A0LG88 Uncharacterized protein7.1e-15699.29Show/hide
Query:  MDVKFTAQSVEPRIQNTNKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENAVAK
        MDVKFTAQSVEPRIQNTNKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENAVAK
Subjt:  MDVKFTAQSVEPRIQNTNKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENAVAK

Query:  VALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRKRAPS
        VALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRKRAPS
Subjt:  VALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRKRAPS

Query:  CDLALEVPCDIATSSHNVAQPGQSKDYVSRIVSRLEAGKSSSSKRIFVCPRQPNMTIPKESSVLPISDDQWVAFSFETGPSQ
        CDLALE+P DIATSSHNVAQPGQSKDYVSRIVSRLEAGKSSSSKRIFVCPRQPNMTIPKESSVLPISDDQWVAFSFETGPSQ
Subjt:  CDLALEVPCDIATSSHNVAQPGQSKDYVSRIVSRLEAGKSSSSKRIFVCPRQPNMTIPKESSVLPISDDQWVAFSFETGPSQ

A0A1S3CMN7 double-stranded RNA-binding protein 1 isoform X28.8e-13085.31Show/hide
Query:  MSNMDVKFTA-QSVEPRIQNTNKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAEN
        ++N+D K T+    E +++  NKS  +++  K      GMQHLYKNKLQNFSQKR LTLPMYTCERDGPPHASRFRCKVEIDGKTY S EFHGTLKDAEN
Subjt:  MSNMDVKFTA-QSVEPRIQNTNKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAEN

Query:  AVAKVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRK
        AVAKVALM LCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVA+FTIKEGSQSISTRK
Subjt:  AVAKVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRK

Query:  RAPSCDLALEVPCDIATSSHNVAQPGQSKDYVSRIVSRLEAGKSSSSKRIFVCPRQPNMTIPKESSVLPISDDQWVAFSFETGPSQ
        RAPSCDLA+EVP  IATSSHNVAQPG+S DYVSRIVS+LEAGKSSSSKRIFVCPRQPNMTIPKESSVLPISDDQWVAFS ETG SQ
Subjt:  RAPSCDLALEVPCDIATSSHNVAQPGQSKDYVSRIVSRLEAGKSSSSKRIFVCPRQPNMTIPKESSVLPISDDQWVAFSFETGPSQ

A0A1S3CMT3 double-stranded RNA-binding protein 1 isoform X12.7e-14793.68Show/hide
Query:  MSNMDVKFTAQSVEPRIQNTNKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENA
        MSNMDVKF  QSVEP+I NT+KSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKR LTLPMYTCERDGPPHASRFRCKVEIDGKTY S EFHGTLKDAENA
Subjt:  MSNMDVKFTAQSVEPRIQNTNKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENA

Query:  VAKVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRKR
        VAKVALM LCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVA+FTIKEGSQSISTRKR
Subjt:  VAKVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRKR

Query:  APSCDLALEVPCDIATSSHNVAQPGQSKDYVSRIVSRLEAGKSSSSKRIFVCPRQPNMTIPKESSVLPISDDQWVAFSFETGPSQ
        APSCDLA+EVP  IATSSHNVAQPG+S DYVSRIVS+LEAGKSSSSKRIFVCPRQPNMTIPKESSVLPISDDQWVAFS ETG SQ
Subjt:  APSCDLALEVPCDIATSSHNVAQPGQSKDYVSRIVSRLEAGKSSSSKRIFVCPRQPNMTIPKESSVLPISDDQWVAFSFETGPSQ

A0A5D3D5D0 Double-stranded RNA-binding protein 1 isoform X12.7e-14793.68Show/hide
Query:  MSNMDVKFTAQSVEPRIQNTNKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENA
        MSNMDVKF  QSVEP+I NT+KSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKR LTLPMYTCERDGPPHASRFRCKVEIDGKTY S EFHGTLKDAENA
Subjt:  MSNMDVKFTAQSVEPRIQNTNKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENA

Query:  VAKVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRKR
        VAKVALM LCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVA+FTIKEGSQSISTRKR
Subjt:  VAKVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRKR

Query:  APSCDLALEVPCDIATSSHNVAQPGQSKDYVSRIVSRLEAGKSSSSKRIFVCPRQPNMTIPKESSVLPISDDQWVAFSFETGPSQ
        APSCDLA+EVP  IATSSHNVAQPG+S DYVSRIVS+LEAGKSSSSKRIFVCPRQPNMTIPKESSVLPISDDQWVAFS ETG SQ
Subjt:  APSCDLALEVPCDIATSSHNVAQPGQSKDYVSRIVSRLEAGKSSSSKRIFVCPRQPNMTIPKESSVLPISDDQWVAFSFETGPSQ

A0A6J1IZS6 double-stranded RNA-binding protein 1-like isoform X23.2e-12480.35Show/hide
Query:  SNMDVKFTAQSVEPRIQNTNKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENAV
        SNM VKF+AQSVEP+IQNT+KSPVV+ FDKEC KLTGM+HLYKNKLQNF+QK+ LTLP+YTCERDGPPHASRFRCKVEIDGKTYES EFH TLKDAENAV
Subjt:  SNMDVKFTAQSVEPRIQNTNKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENAV

Query:  AKVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRKRA
        AKVAL+S CQDG QE  DSGLYKNLLQEMAQK GLGLP YSTSQSGE+HVPVFVSTVK+GE NFEG+ SRTKKQAEMSAAK AY +IKEGSQSISTRKRA
Subjt:  AKVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRKRA

Query:  P-SCDLALEVPCDIATSSHNVAQPGQSKDYVSRIVSRLEAGKSSSSKRIFVCPRQPNMTIPKESSVLPISDDQWVAFSFETGPSQ
        P SCD+  EV  DIA SS NVAQPG + DYV  +VS+LEAGKSSSSKR+ VCPRQPNMT PK+ +VLP+SDDQWVAFS  T  +Q
Subjt:  P-SCDLALEVPCDIATSSHNVAQPGQSKDYVSRIVSRLEAGKSSSSKRIFVCPRQPNMTIPKESSVLPISDDQWVAFSFETGPSQ

SwissProt top hitse value%identityAlignment
Q5N8Z0 Double-stranded RNA-binding protein 16.0e-3548.81Show/hide
Query:  QHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENAVAKVALMSLCQDGAQEDS---DSGLYKNLLQEMAQKGGL
        Q  YK++LQ ++QK+G  LP Y   R+GP HASRF+  V +DGK +ES E+  T+K+AE+A AK+ALMSL Q+ +  +        YKNLLQE+AQK G 
Subjt:  QHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENAVAKVALMSLCQDGAQEDS---DSGLYKNLLQEMAQKGGL

Query:  GLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAY--FTIKEGSQSISTRKRAP
         LP YST+  G V VP+F STV   + +F+G+P+ TKKQAEM+AA+VA+  F  +  +   ST  R P
Subjt:  GLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAY--FTIKEGSQSISTRKRAP

Q5N8Z0 Double-stranded RNA-binding protein 12.7e-0344.68Show/hide
Query:  VSRLEAGKSSSSKRIFVCPRQPNMTIPKESSVLPISDDQWVAFSFET
        VS    G S  + R+ V PR+P++ +P+ ++VLP SDD WVA S  T
Subjt:  VSRLEAGKSSSSKRIFVCPRQPNMTIPKESSVLPISDDQWVAFSFET

Q8H1D4 Double-stranded RNA-binding protein 41.0e-3444.74Show/hide
Query:  MQHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENAVAKVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGL
        M H+YK +LQ ++ +  L LP+Y  ER+GPPHA RFRC V   G+T++S EF  TLK AE+A AK+A+ SL    + E  D   YKNLLQE+AQK    L
Subjt:  MQHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENAVAKVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGL

Query:  PAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRKRAPSCDLALEVPCDIATSSHNVAQPGQSK
        P Y+T+ SG  H P F STV+   + F G+ ++TKK AEMSAAKVA+ +IK G+ + +     PS +   +V  ++ +S   +     SK
Subjt:  PAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRKRAPSCDLALEVPCDIATSSHNVAQPGQSK

Q9AV50 Double-stranded RNA-binding protein 61.2e-3044.52Show/hide
Query:  LYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENAVAKVALMSLCQDG------AQEDSDSGLYKNLLQEMAQKGG
        +YKN+LQ  +Q+    LP YTC R+GP HA RF+  V  +G+ +ES  F  TL+ AE+A A+VAL +L + G      A+   ++G+YKNLLQE+AQ+ G
Subjt:  LYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENAVAKVALMSLCQDG------AQEDSDSGLYKNLLQEMAQKGG

Query:  LGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKE
          LP+Y+T +SG  H+PVF  TV++    F G P++ KKQAE +AA  A+ ++++
Subjt:  LGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKE

Q9LJF5 Double-stranded RNA-binding protein 31.2e-3041.94Show/hide
Query:  LYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENAVAKVALMSLCQDGAQED------SDSGLYKNLLQEMAQKGG
        +YKN+LQ  +Q+   +LP YTC R+GP HA RF+  V  +G+ +ES  +  TL+ AE++ A+VAL +L   G  +        ++G+YKNLLQE A + G
Subjt:  LYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENAVAKVALMSLCQDGAQED------SDSGLYKNLLQEMAQKGG

Query:  LGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKE
        L LP Y++ +SG  H+P F  TV++   +F G+ ++TKKQAE +AA  A+F++++
Subjt:  LGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKE

Q9SKN2 Double-stranded RNA-binding protein 23.1e-3135.44Show/hide
Query:  LYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENAVAKVALMSLCQDGAQED------SDSGLYKNLLQEMAQKGG
        +YKN+LQ  +Q+    LP YTC R+GP HA RF+  V  +G+ +ES ++  TL+ AE++ A+VAL +L   G           ++G+YKNLLQE+AQ+ G
Subjt:  LYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENAVAKVALMSLCQDGAQED------SDSGLYKNLLQEMAQKGG

Query:  LGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRKRAPSCDLALE------------VPCDIAT-SSHNVA
          LP Y+T +SG  H PVF  TV++    F G P++ KKQAE +AA  A+ ++K+ ++  S+    P     LE            +  +I T SS +  
Subjt:  LGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRKRAPSCDLALE------------VPCDIAT-SSHNVA

Query:  QPGQSKDYVSRIVSRLEAGKSSSSKRI--FVCPRQPN
         P   K ++  +         +++ RI  F+CP+QP+
Subjt:  QPGQSKDYVSRIVSRLEAGKSSSSKRI--FVCPRQPN

Arabidopsis top hitse value%identityAlignment
AT2G28380.1 dsRNA-binding protein 22.2e-3235.44Show/hide
Query:  LYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENAVAKVALMSLCQDGAQED------SDSGLYKNLLQEMAQKGG
        +YKN+LQ  +Q+    LP YTC R+GP HA RF+  V  +G+ +ES ++  TL+ AE++ A+VAL +L   G           ++G+YKNLLQE+AQ+ G
Subjt:  LYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENAVAKVALMSLCQDGAQED------SDSGLYKNLLQEMAQKGG

Query:  LGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRKRAPSCDLALE------------VPCDIAT-SSHNVA
          LP Y+T +SG  H PVF  TV++    F G P++ KKQAE +AA  A+ ++K+ ++  S+    P     LE            +  +I T SS +  
Subjt:  LGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRKRAPSCDLALE------------VPCDIAT-SSHNVA

Query:  QPGQSKDYVSRIVSRLEAGKSSSSKRI--FVCPRQPN
         P   K ++  +         +++ RI  F+CP+QP+
Subjt:  QPGQSKDYVSRIVSRLEAGKSSSSKRI--FVCPRQPN

AT3G26932.1 dsRNA-binding protein 38.3e-3241.94Show/hide
Query:  LYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENAVAKVALMSLCQDGAQED------SDSGLYKNLLQEMAQKGG
        +YKN+LQ  +Q+   +LP YTC R+GP HA RF+  V  +G+ +ES  +  TL+ AE++ A+VAL +L   G  +        ++G+YKNLLQE A + G
Subjt:  LYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENAVAKVALMSLCQDGAQED------SDSGLYKNLLQEMAQKGG

Query:  LGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKE
        L LP Y++ +SG  H+P F  TV++   +F G+ ++TKKQAE +AA  A+F++++
Subjt:  LGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKE

AT3G62800.1 double-stranded-RNA-binding protein 47.3e-3644.74Show/hide
Query:  MQHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENAVAKVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGL
        M H+YK +LQ ++ +  L LP+Y  ER+GPPHA RFRC V   G+T++S EF  TLK AE+A AK+A+ SL    + E  D   YKNLLQE+AQK    L
Subjt:  MQHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENAVAKVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGL

Query:  PAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRKRAPSCDLALEVPCDIATSSHNVAQPGQSK
        P Y+T+ SG  H P F STV+   + F G+ ++TKK AEMSAAKVA+ +IK G+ + +     PS +   +V  ++ +S   +     SK
Subjt:  PAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRKRAPSCDLALEVPCDIATSSHNVAQPGQSK

AT3G62800.2 double-stranded-RNA-binding protein 47.3e-3644.74Show/hide
Query:  MQHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENAVAKVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGL
        M H+YK +LQ ++ +  L LP+Y  ER+GPPHA RFRC V   G+T++S EF  TLK AE+A AK+A+ SL    + E  D   YKNLLQE+AQK    L
Subjt:  MQHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENAVAKVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGL

Query:  PAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRKRAPSCDLALEVPCDIATSSHNVAQPGQSK
        P Y+T+ SG  H P F STV+   + F G+ ++TKK AEMSAAKVA+ +IK G+ + +     PS +   +V  ++ +S   +     SK
Subjt:  PAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRKRAPSCDLALEVPCDIATSSHNVAQPGQSK

AT3G62800.3 double-stranded-RNA-binding protein 47.3e-3644.74Show/hide
Query:  MQHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENAVAKVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGL
        M H+YK +LQ ++ +  L LP+Y  ER+GPPHA RFRC V   G+T++S EF  TLK AE+A AK+A+ SL    + E  D   YKNLLQE+AQK    L
Subjt:  MQHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENAVAKVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGL

Query:  PAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRKRAPSCDLALEVPCDIATSSHNVAQPGQSK
        P Y+T+ SG  H P F STV+   + F G+ ++TKK AEMSAAKVA+ +IK G+ + +     PS +   +V  ++ +S   +     SK
Subjt:  PAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRKRAPSCDLALEVPCDIATSSHNVAQPGQSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAATATGGACGTCAAATTTACAGCACAATCAGTTGAACCAAGAATTCAAAACACTAACAAGTCTCCCGTGGTTGAAGACTTCGACAAAGAATGCCTTAAATTGAC
TGGTATGCAACATTTATACAAGAATAAGCTGCAAAATTTCTCCCAGAAGAGAGGCCTCACTTTACCCATGTACACATGTGAGCGTGATGGCCCACCCCATGCTAGTCGCT
TCAGATGTAAAGTGGAAATAGATGGAAAGACCTATGAAAGTCTAGAATTTCATGGCACATTGAAAGATGCTGAGAATGCAGTTGCAAAAGTTGCTTTAATGTCTTTATGT
CAAGATGGAGCTCAAGAGGATTCTGATTCTGGCCTTTACAAAAATCTCTTACAAGAGATGGCCCAAAAAGGAGGCCTAGGTTTACCAGCTTATTCAACATCTCAATCCGG
TGAAGTTCATGTACCGGTCTTTGTTTCTACAGTGAAAGTAGGAGAAGAAAATTTCGAAGGGAAACCATCAAGAACTAAGAAACAAGCTGAAATGAGTGCTGCAAAAGTTG
CTTATTTTACCATAAAGGAGGGATCTCAAAGCATTTCAACAAGAAAGAGAGCTCCATCGTGTGACCTTGCTCTTGAAGTTCCCTGTGATATTGCTACATCATCCCATAAT
GTTGCTCAACCAGGTCAGAGCAAGGATTACGTCTCCAGGATAGTCTCAAGGCTAGAAGCTGGAAAAAGCTCATCTTCCAAAAGGATATTTGTTTGTCCTCGTCAGCCGAA
TATGACAATTCCAAAGGAAAGTTCAGTATTACCAATAAGTGATGACCAATGGGTTGCATTCTCGTTCGAAACTGGACCTAGTCAATAA
mRNA sequenceShow/hide mRNA sequence
TTTGGCCTTGCTGCAATTGTTTGTTATCCTGGACAACACAAAGTCAAGAGGGTAAGTTAAGGTAATTTTGGTGCAATAACTAACCTGGACAACAAAGTTACTTCCCCACC
GAGACCCGAAGTAAAGCATGACGTGTCATACAAATCTTCTGAACTTAAGGAATCTAGTAAAGATTCTCCCATCATGAGTAATATGGACGTCAAATTTACAGCACAATCAG
TTGAACCAAGAATTCAAAACACTAACAAGTCTCCCGTGGTTGAAGACTTCGACAAAGAATGCCTTAAATTGACTGGTATGCAACATTTATACAAGAATAAGCTGCAAAAT
TTCTCCCAGAAGAGAGGCCTCACTTTACCCATGTACACATGTGAGCGTGATGGCCCACCCCATGCTAGTCGCTTCAGATGTAAAGTGGAAATAGATGGAAAGACCTATGA
AAGTCTAGAATTTCATGGCACATTGAAAGATGCTGAGAATGCAGTTGCAAAAGTTGCTTTAATGTCTTTATGTCAAGATGGAGCTCAAGAGGATTCTGATTCTGGCCTTT
ACAAAAATCTCTTACAAGAGATGGCCCAAAAAGGAGGCCTAGGTTTACCAGCTTATTCAACATCTCAATCCGGTGAAGTTCATGTACCGGTCTTTGTTTCTACAGTGAAA
GTAGGAGAAGAAAATTTCGAAGGGAAACCATCAAGAACTAAGAAACAAGCTGAAATGAGTGCTGCAAAAGTTGCTTATTTTACCATAAAGGAGGGATCTCAAAGCATTTC
AACAAGAAAGAGAGCTCCATCGTGTGACCTTGCTCTTGAAGTTCCCTGTGATATTGCTACATCATCCCATAATGTTGCTCAACCAGGTCAGAGCAAGGATTACGTCTCCA
GGATAGTCTCAAGGCTAGAAGCTGGAAAAAGCTCATCTTCCAAAAGGATATTTGTTTGTCCTCGTCAGCCGAATATGACAATTCCAAAGGAAAGTTCAGTATTACCAATA
AGTGATGACCAATGGGTTGCATTCTCGTTCGAAACTGGACCTAGTCAATAACTTTGCCATGAATATCAGAGTTTTGAACTGTAACTTAACCTTGCTCAGGACTGAAGTAT
GTCAACTCCTAATACTTAGGTAGATACATATGTATCTATTAAGTATTTAACTCAAAATTGTTGACAATACTTGGAACAACACCGTCGATGTATGCTTTCTTCTGTGGTTT
AGGATTATTGGTAGGCTTAGTTTTTACCTGCAACTTGATCTTCATTGTCAAAAGGTGTATTATAATAATTATATATGATCGGATGTTACTTTTTCTTTTTGCTTTTAAAT
CTGTTATTAGTAGGAGGCTATTATCTCTTGAGTTTTGCACAATATAGAAGTATTCTCATTGTTG
Protein sequenceShow/hide protein sequence
MSNMDVKFTAQSVEPRIQNTNKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENAVAKVALMSLC
QDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRKRAPSCDLALEVPCDIATSSHN
VAQPGQSKDYVSRIVSRLEAGKSSSSKRIFVCPRQPNMTIPKESSVLPISDDQWVAFSFETGPSQ