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CSPI03G40700 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G40700
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr3:34857925..34858793
RNA-Seq ExpressionCSPI03G40700
SyntenyCSPI03G40700
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057194.1 hypothetical protein E6C27_scaffold280G00230 [Cucumis melo var. makuwa]2.5e-4284.55Show/hide
Query:  MGLDDWELLDCHEDHDQEKSRPHENVVISGQKLIGDTKNEMEAVAEFDVEEEEKVDSRGGMDMAMEKRKQWGRTVVCSFGIAVAATICSVLLGSHSHHHG
        MGLDDWELLDCHED  +EKSR HEN VISGQKLI DTK E+E VAEF+VEEEEK +SR GMDMA EK+KQ GR VVCSFGIAVAATICSVLLGSHSHHHG
Subjt:  MGLDDWELLDCHEDHDQEKSRPHENVVISGQKLIGDTKNEMEAVAEFDVEEEEKVDSRGGMDMAMEKRKQWGRTVVCSFGIAVAATICSVLLGSHSHHHG

Query:  GGAFVNKRHC
        GGAFVNKRHC
Subjt:  GGAFVNKRHC
KGN59752.1 hypothetical protein Csa_001232 [Cucumis sativus]7.9e-57100Show/hide
Query:  MGLDDWELLDCHEDHDQEKSRPHENVVISGQKLIGDTKNEMEAVAEFDVEEEEKVDSRGGMDMAMEKRKQWGRTVVCSFGIAVAATICSVLLGSHSHHHG
        MGLDDWELLDCHEDHDQEKSRPHENVVISGQKLIGDTKNEMEAVAEFDVEEEEKVDSRGGMDMAMEKRKQWGRTVVCSFGIAVAATICSVLLGSHSHHHG
Subjt:  MGLDDWELLDCHEDHDQEKSRPHENVVISGQKLIGDTKNEMEAVAEFDVEEEEKVDSRGGMDMAMEKRKQWGRTVVCSFGIAVAATICSVLLGSHSHHHG

Query:  GGAFVNKRHC
        GGAFVNKRHC
Subjt:  GGAFVNKRHC
TrEMBL top hitse value%identityAlignment
A0A0A0LG95 Uncharacterized protein3.8e-57100Show/hide
Query:  MGLDDWELLDCHEDHDQEKSRPHENVVISGQKLIGDTKNEMEAVAEFDVEEEEKVDSRGGMDMAMEKRKQWGRTVVCSFGIAVAATICSVLLGSHSHHHG
        MGLDDWELLDCHEDHDQEKSRPHENVVISGQKLIGDTKNEMEAVAEFDVEEEEKVDSRGGMDMAMEKRKQWGRTVVCSFGIAVAATICSVLLGSHSHHHG
Subjt:  MGLDDWELLDCHEDHDQEKSRPHENVVISGQKLIGDTKNEMEAVAEFDVEEEEKVDSRGGMDMAMEKRKQWGRTVVCSFGIAVAATICSVLLGSHSHHHG

Query:  GGAFVNKRHC
        GGAFVNKRHC
Subjt:  GGAFVNKRHC
A0A5D3D5E0 Uncharacterized protein1.2e-4284.55Show/hide
Query:  MGLDDWELLDCHEDHDQEKSRPHENVVISGQKLIGDTKNEMEAVAEFDVEEEEKVDSRGGMDMAMEKRKQWGRTVVCSFGIAVAATICSVLLGSHSHHHG
        MGLDDWELLDCHED  +EKSR HEN VISGQKLI DTK E+E VAEF+VEEEEK +SR GMDMA EK+KQ GR VVCSFGIAVAATICSVLLGSHSHHHG
Subjt:  MGLDDWELLDCHEDHDQEKSRPHENVVISGQKLIGDTKNEMEAVAEFDVEEEEKVDSRGGMDMAMEKRKQWGRTVVCSFGIAVAATICSVLLGSHSHHHG

Query:  GGAFVNKRHC
        GGAFVNKRHC
Subjt:  GGAFVNKRHC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACTCGACGACTGGGAACTCCTCGATTGCCATGAAGACCATGATCAAGAGAAAAGCAGGCCGCACGAAAACGTAGTAATTTCCGGCCAGAAGTTGATCGGCGACAC
GAAGAACGAGATGGAAGCGGTCGCGGAGTTTGATGTGGAGGAAGAGGAAAAGGTGGATTCAAGAGGAGGGATGGATATGGCGATGGAGAAAAGGAAACAATGGGGGAGAA
CGGTTGTTTGTTCGTTTGGAATTGCTGTGGCGGCTACAATTTGTAGTGTGTTGTTGGGAAGCCATAGCCACCACCATGGGGGAGGTGCGTTTGTGAATAAACGCCATTGT
TGA
mRNA sequenceShow/hide mRNA sequence
CTAGCTTAAGAAAAGAGAGATTGGAGGAGTACCATGTTCATAAGCAACGGAGGCTCAAGGGTTTTGGAAGTATCCCAAGAAGCTTTATCCAAATAGAACTTCACATCCAT
TATTGACAACGATGTAGATATTGATTCAAACCAAGACGTGGCTGCCATGGCTGCTCCTTTCAATCAATTCCACTCTCCCCTAATTTCTTTCAACCAATAATTCACTTCAA
ACCTTCCTTCCATATTTAATTTAGTTTGGAATATCATATCCACCAATATAATTTCCAAAAAATGGGACTCGACGACTGGGAACTCCTCGATTGCCATGAAGACCATGATC
AAGAGAAAAGCAGGCCGCACGAAAACGTAGTAATTTCCGGCCAGAAGTTGATCGGCGACACGAAGAACGAGATGGAAGCGGTCGCGGAGTTTGATGTGGAGGAAGAGGAA
AAGGTGGATTCAAGAGGAGGGATGGATATGGCGATGGAGAAAAGGAAACAATGGGGGAGAACGGTTGTTTGTTCGTTTGGAATTGCTGTGGCGGCTACAATTTGTAGTGT
GTTGTTGGGAAGCCATAGCCACCACCATGGGGGAGGTGCGTTTGTGAATAAACGCCATTGTTGAACGTTGAATACTACAATAGGTTTTCTATTTATTACCGATCAAAACT
AGCAAAGCATGTATGATAATTTTGAACTCTCTCGTTACTTTTTGTTTTTTCTTGGTGATTAGTTTTCTATTAGTTATTATTCTTACAATAATGGATCAATTGTAATGAAA
TTGAATTCATGGATCGTTTATAATGAATATCAATTGCAAACATAGTTTGATGGCTTTCGATGATGTTTATCAAAATAGCAAACGTAATTTTATGACTTT
Protein sequenceShow/hide protein sequence
MGLDDWELLDCHEDHDQEKSRPHENVVISGQKLIGDTKNEMEAVAEFDVEEEEKVDSRGGMDMAMEKRKQWGRTVVCSFGIAVAATICSVLLGSHSHHHGGGAFVNKRHC