CuGenDBv2

Gene ID	CSPI03G40710
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	CDT1-like protein a
Genome location	Chr3:34859931..34861760
RNA-Seq Expression	CSPI03G40710
Synteny	CSPI03G40710
Gene Ontology terms	GO:0000076 - DNA replication checkpoint (biological process) GO:0000278 - mitotic cell cycle (biological process) GO:0030174 - regulation of DNA-dependent DNA replication initiation (biological process) GO:0071163 - DNA replication preinitiation complex assembly (biological process) GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function) GO:0070182 - DNA polymerase binding (molecular function)
InterPro domains	IPR014939 - CDT1 Geminin-binding domain-like IPR036390 - Winged helix DNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0051017.1 CDT1-like protein b [Cucumis melo var. makuwa]

3.4e-86

65.29

Show/hide

Query:  MAGASNKI-SSPSSTLPFKSNKNVSSNSTSLLKDPQSLSSKTPKKPAE-RTRKR-KKVALSIKEVERAAQSVHESNSQLLPHDLTTEGSKVVRRRMDSRS
        MA AS KI SS SSTLPFK  K + SN  SLL+D QSLSSKTP+KPAE  TR R +KVALSIKEV++AA+SV ESN Q LP DL TE  K VRR++DS S
Subjt:  MAGASNKI-SSPSSTLPFKSNKNVSSNSTSLLKDPQSLSSKTPKKPAE-RTRKR-KKVALSIKEVERAAQSVHESNSQLLPHDLTTEGSKVVRRRMDSRS

Query:  NESQSSSSNTTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPE
        NESQS       V+NK S KLPEKFE+LCKFF  L+ AMRLLRCKGVASNFSNVC K+E LTDRRFSY HLAQ KFILPEAIV+KKV V+DE T   KP+
Subjt:  NESQSSSSNTTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPE

Query:  LHISFNFGVLAVDSKENHYTQLRKLFRIQLSEFID------DVP------AFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENHGF
        LHISFNF VL  ++KE+ Y QLRKLFR +LSEF+       DVP       FNFR+QDL++K+ +LS +KTSIEQLAP QPMPS +GI  NH+SEEN GF
Subjt:  LHISFNFGVLAVDSKENHYTQLRKLFRIQLSEFID------DVP------AFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENHGF

Query:  PMIKSTMTGHGPNK
         ++KSTM+  G +K
Subjt:  PMIKSTMTGHGPNK

XP_004151978.3 CDT1-like protein a, chloroplastic [Cucumis sativus]

5.4e-108

74.92

Show/hide

Query:  MAGASNKISSPSSTLPFKSNKNVSSNSTSLLKDPQSLSSKTPKKPAERTRKRKKVALSIKEVERAAQSVHESNSQLLPHDLTTEGSKVVRRRMDSRSNES
        MA ASNKISS SSTLPFKS KN+ SNS+SLLKDPQSLSS+TP+KP ER RKR KVALSIKEV++AAQSVHESN Q L HDLTT GSK+VRR+MDS SNES
Subjt:  MAGASNKISSPSSTLPFKSNKNVSSNSTSLLKDPQSLSSKTPKKPAERTRKRKKVALSIKEVERAAQSVHESNSQLLPHDLTTEGSKVVRRRMDSRSNES

Query:  QSSSSNTTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPELHI
        QSS S  TCVDNK SNKLPEKFELLCKFFDCL+ AMRLLR KGVASNFS+VC+KIEVLTDRRFSYSHLAQLKFILPEAI++KKV VFDE T+  KP+LHI
Subjt:  QSSSSNTTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPELHI

Query:  SFNFGVLAVDSKENHYTQLRKLFRIQLSEF------IDDVP------AFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENHGFPMI
        SFNFGVL  +SKE+ Y QLRKLFR +LSEF      IDD+P       FNFR+ +L  +T +LS VKTSIEQLAP QP+PSA+ I SNH+SE N GF +I
Subjt:  SFNFGVLAVDSKENHYTQLRKLFRIQLSEF------IDDVP------AFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENHGFPMI

Query:  KSTMTGHGPNK
        KSTMTGHGPNK
Subjt:  KSTMTGHGPNK

XP_008447443.1 PREDICTED: CDT1-like protein a, chloroplastic [Cucumis melo]

5.5e-105

74.28

Show/hide

Query:  MAGASNKISSPSSTLPFKSNKNVSSNSTSLLKDPQSLSSKTPKKPAERTRKRKKVALSIKEVERAAQSVHESNSQLLPHDLTTEGSKVVRRRMDSRSNES
        MA AS+ ISSPSSTLPFKS KN+ SN  SLLKDPQSLSSKTP+KPAERTRKR KVALSIKEV+RAAQSV+ESN Q LPHDLTT+GSK+VRR+MDS SNES
Subjt:  MAGASNKISSPSSTLPFKSNKNVSSNSTSLLKDPQSLSSKTPKKPAERTRKRKKVALSIKEVERAAQSVHESNSQLLPHDLTTEGSKVVRRRMDSRSNES

Query:  QSSSSNTTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPELHI
         SS S  TCVD K SNKLPEKFELLCKFFDCL+ AMRLLR KGVASNFSNVC+KIEVLTDRRFSY+HLAQLKFILPEAI++KKV VFDE T+  KP+LHI
Subjt:  QSSSSNTTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPELHI

Query:  SFNFGVLAVDSKENHYTQLRKLFRIQLSEF------IDDVP------AFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENHGFPMI
        SFNF +L  +SKE+ Y QLRKLFR +LSEF      IDDVP       FNFR+Q+L  KT  LS VKTSIEQL P QPMPSA+G+ SNH+ EEN GF +I
Subjt:  SFNFGVLAVDSKENHYTQLRKLFRIQLSEF------IDDVP------AFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENHGFPMI

Query:  KSTMTGHGPNK
        KS  T HGPNK
Subjt:  KSTMTGHGPNK

XP_031737520.1 CDT1-like protein a, chloroplastic [Cucumis sativus]

7.7e-107

74.28

Show/hide

Query:  MAGASNKISSPSSTLPFKSNKNVSSNSTSLLKDPQSLSSKTPKKPAERTRKRKKVALSIKEVERAAQSVHESNSQLLPHDLTTEGSKVVRRRMDSRSNES
        MA ASNKISS SSTLPFKS KN+ SNS+SLLKDPQSLSS+TP+KP ER RKR KVALSIKEV++AAQSVHESN Q L HDLTT GSK+VRR+MDS S ES
Subjt:  MAGASNKISSPSSTLPFKSNKNVSSNSTSLLKDPQSLSSKTPKKPAERTRKRKKVALSIKEVERAAQSVHESNSQLLPHDLTTEGSKVVRRRMDSRSNES

Query:  QSSSSNTTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPELHI
        QSS S  TCVDNK SNK PEKFELLCKFFDCL+ AMRLLR KGVASNFS+VC+KIEVLTDRRFSYSHLAQLKFILPEAI++KKV VFDE T+  KP+LHI
Subjt:  QSSSSNTTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPELHI

Query:  SFNFGVLAVDSKENHYTQLRKLFRIQLSEF------IDDVP------AFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENHGFPMI
        SFNFGVL  +SKE+ Y QLRKLFR +LSEF      IDD+P       FNFR+ +L  +T +LS VKTSIEQLAP QP+PSA+ I SNH+SE N GF +I
Subjt:  SFNFGVLAVDSKENHYTQLRKLFRIQLSEF------IDDVP------AFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENHGFPMI

Query:  KSTMTGHGPNK
        KSTMTGHGPNK
Subjt:  KSTMTGHGPNK

XP_031739146.1 CDT1-like protein a, chloroplastic [Cucumis sativus]

9.0e-156

97.32

Show/hide

Query:  MAGASNKISSPSSTLPFKSNKNVSSNSTSLLKDPQSLSSKTPKKPAERTRKRKKVALSIKEVERAAQSVHESNSQLLPHDLTTEGSKVVRRRMDSRSNES
        MAGASNKISSPSSTLPFKSNKNVSSNSTSLLKDPQSLSSKTP+KPAERTRKRKKVALSI+EVERAAQSVHESNSQLLPHDLTTEGSKVVRRRMDSRSNES
Subjt:  MAGASNKISSPSSTLPFKSNKNVSSNSTSLLKDPQSLSSKTPKKPAERTRKRKKVALSIKEVERAAQSVHESNSQLLPHDLTTEGSKVVRRRMDSRSNES

Query:  QSSSSNTTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPELHI
        QSSSS++TCVDNK+SNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFS+VCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPELHI
Subjt:  QSSSSNTTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPELHI

Query:  SFNFGVLAVDSKENHYTQLRKLFRIQLSEFIDDVPAFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENHGFPMIKSTMTGHGPNK
        SFNFGVLAVDSKENHYTQLRKLFRIQLSEFIDDVPAFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEEN GFP+IKSTMTGHGPNK
Subjt:  SFNFGVLAVDSKENHYTQLRKLFRIQLSEFIDDVPAFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENHGFPMIKSTMTGHGPNK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L7I7 CDT1 domain-containing protein

1.1e-106

74.28

Show/hide

Query:  MAGASNKISSPSSTLPFKSNKNVSSNSTSLLKDPQSLSSKTPKKPAERTRKRKKVALSIKEVERAAQSVHESNSQLLPHDLTTEGSKVVRRRMDSRSNES
        MA ASNKISS SSTLPFKS KN+ SNS+SLLKDPQSLSS+TP+KP ER RKR KVALSIKEV++AAQSVHESN Q L HDLTT GSK+VRR+MDS SNES
Subjt:  MAGASNKISSPSSTLPFKSNKNVSSNSTSLLKDPQSLSSKTPKKPAERTRKRKKVALSIKEVERAAQSVHESNSQLLPHDLTTEGSKVVRRRMDSRSNES

Query:  QSSSSNTTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPELHI
        QSS S  TCVDNK SNKLPEKFELLCKFFDCL+ AMRLLR KGVASNFS+VC+KIEVLTDRRFSYSHLAQLKFILPEAI++KKV VF   T+  KP+LHI
Subjt:  QSSSSNTTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPELHI

Query:  SFNFGVLAVDSKENHYTQLRKLFRIQLSEF------IDDVP------AFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENHGFPMI
        SFNFGVL  +SKE+ Y QLRKLFR +LSEF      IDD+P       FNFR+ +L  +T +LS VKTSIEQLAP QP+PSA+ I SNH+SE N GF +I
Subjt:  SFNFGVLAVDSKENHYTQLRKLFRIQLSEF------IDDVP------AFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENHGFPMI

Query:  KSTMTGHGPNK
        KSTMTGHGPNK
Subjt:  KSTMTGHGPNK

A0A1S3BGW9 CDT1-like protein a, chloroplastic

2.7e-105

74.28

Show/hide

Query:  MAGASNKISSPSSTLPFKSNKNVSSNSTSLLKDPQSLSSKTPKKPAERTRKRKKVALSIKEVERAAQSVHESNSQLLPHDLTTEGSKVVRRRMDSRSNES
        MA AS+ ISSPSSTLPFKS KN+ SN  SLLKDPQSLSSKTP+KPAERTRKR KVALSIKEV+RAAQSV+ESN Q LPHDLTT+GSK+VRR+MDS SNES
Subjt:  MAGASNKISSPSSTLPFKSNKNVSSNSTSLLKDPQSLSSKTPKKPAERTRKRKKVALSIKEVERAAQSVHESNSQLLPHDLTTEGSKVVRRRMDSRSNES

Query:  QSSSSNTTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPELHI
         SS S  TCVD K SNKLPEKFELLCKFFDCL+ AMRLLR KGVASNFSNVC+KIEVLTDRRFSY+HLAQLKFILPEAI++KKV VFDE T+  KP+LHI
Subjt:  QSSSSNTTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPELHI

Query:  SFNFGVLAVDSKENHYTQLRKLFRIQLSEF------IDDVP------AFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENHGFPMI
        SFNF +L  +SKE+ Y QLRKLFR +LSEF      IDDVP       FNFR+Q+L  KT  LS VKTSIEQL P QPMPSA+G+ SNH+ EEN GF +I
Subjt:  SFNFGVLAVDSKENHYTQLRKLFRIQLSEF------IDDVP------AFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENHGFPMI

Query:  KSTMTGHGPNK
        KS  T HGPNK
Subjt:  KSTMTGHGPNK

A0A1S3CEP6 CDT1-like protein b

1.6e-86

65.29

Show/hide

Query:  MAGASNKI-SSPSSTLPFKSNKNVSSNSTSLLKDPQSLSSKTPKKPAE-RTRKR-KKVALSIKEVERAAQSVHESNSQLLPHDLTTEGSKVVRRRMDSRS
        MA AS KI SS SSTLPFK  K + SN  SLL+D QSLSSKTP+KPAE  TR R +KVALSIKEV++AA+SV ESN Q LP DL TE  K VRR++DS S
Subjt:  MAGASNKI-SSPSSTLPFKSNKNVSSNSTSLLKDPQSLSSKTPKKPAE-RTRKR-KKVALSIKEVERAAQSVHESNSQLLPHDLTTEGSKVVRRRMDSRS

Query:  NESQSSSSNTTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPE
        NESQS       V+NK S KLPEKFE+LCKFF  L+ AMRLLRCKGVASNFSNVC K+E LTDRRFSY HLAQ KFILPEAIV+KKV V+DE T   KP+
Subjt:  NESQSSSSNTTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPE

Query:  LHISFNFGVLAVDSKENHYTQLRKLFRIQLSEFID------DVP------AFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENHGF
        LHISFNF VL  ++KE+ Y QLRKLFR +LSEF+       DVP       FNFR+QDL++K+ +LS +KTSIEQLAP QPMPS +GI  NH+SEEN GF
Subjt:  LHISFNFGVLAVDSKENHYTQLRKLFRIQLSEFID------DVP------AFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENHGF

Query:  PMIKSTMTGHGPNK
         ++KSTM+  G +K
Subjt:  PMIKSTMTGHGPNK

A0A5A7T8X4 CDT1-like protein a

2.7e-105

74.28

Show/hide

Query:  MAGASNKISSPSSTLPFKSNKNVSSNSTSLLKDPQSLSSKTPKKPAERTRKRKKVALSIKEVERAAQSVHESNSQLLPHDLTTEGSKVVRRRMDSRSNES
        MA AS+ ISSPSSTLPFKS KN+ SN  SLLKDPQSLSSKTP+KPAERTRKR KVALSIKEV+RAAQSV+ESN Q LPHDLTT+GSK+VRR+MDS SNES
Subjt:  MAGASNKISSPSSTLPFKSNKNVSSNSTSLLKDPQSLSSKTPKKPAERTRKRKKVALSIKEVERAAQSVHESNSQLLPHDLTTEGSKVVRRRMDSRSNES

Query:  QSSSSNTTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPELHI
         SS S  TCVD K SNKLPEKFELLCKFFDCL+ AMRLLR KGVASNFSNVC+KIEVLTDRRFSY+HLAQLKFILPEAI++KKV VFDE T+  KP+LHI
Subjt:  QSSSSNTTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPELHI

Query:  SFNFGVLAVDSKENHYTQLRKLFRIQLSEF------IDDVP------AFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENHGFPMI
        SFNF +L  +SKE+ Y QLRKLFR +LSEF      IDDVP       FNFR+Q+L  KT  LS VKTSIEQL P QPMPSA+G+ SNH+ EEN GF +I
Subjt:  SFNFGVLAVDSKENHYTQLRKLFRIQLSEF------IDDVP------AFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENHGFPMI

Query:  KSTMTGHGPNK
        KS  T HGPNK
Subjt:  KSTMTGHGPNK

A0A5D3BZJ0 CDT1-like protein b

1.6e-86

65.29

Show/hide

Query:  MAGASNKI-SSPSSTLPFKSNKNVSSNSTSLLKDPQSLSSKTPKKPAE-RTRKR-KKVALSIKEVERAAQSVHESNSQLLPHDLTTEGSKVVRRRMDSRS
        MA AS KI SS SSTLPFK  K + SN  SLL+D QSLSSKTP+KPAE  TR R +KVALSIKEV++AA+SV ESN Q LP DL TE  K VRR++DS S
Subjt:  MAGASNKI-SSPSSTLPFKSNKNVSSNSTSLLKDPQSLSSKTPKKPAE-RTRKR-KKVALSIKEVERAAQSVHESNSQLLPHDLTTEGSKVVRRRMDSRS

Query:  NESQSSSSNTTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPE
        NESQS       V+NK S KLPEKFE+LCKFF  L+ AMRLLRCKGVASNFSNVC K+E LTDRRFSY HLAQ KFILPEAIV+KKV V+DE T   KP+
Subjt:  NESQSSSSNTTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPE

Query:  LHISFNFGVLAVDSKENHYTQLRKLFRIQLSEFID------DVP------AFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENHGF
        LHISFNF VL  ++KE+ Y QLRKLFR +LSEF+       DVP       FNFR+QDL++K+ +LS +KTSIEQLAP QPMPS +GI  NH+SEEN GF
Subjt:  LHISFNFGVLAVDSKENHYTQLRKLFRIQLSEFID------DVP------AFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENHGF

Query:  PMIKSTMTGHGPNK
         ++KSTM+  G +K
Subjt:  PMIKSTMTGHGPNK

SwissProt top hits

e value

%identity

Alignment

Q9M1S9 CDT1-like protein b

2.1e-22

48.28

Show/hide

Query:  KLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPELHISFNFGVLAVDSK--EN
        KLPE+FE+L +FF+ L+ A+RLL+ KG ++ ++N+C KIE LT+R FSY HLAQ+K I PEAI +K+V  F E T   KP LHI  N   + V+      
Subjt:  KLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPELHISFNFGVLAVDSK--EN

Query:  HYTQLRKLFRIQLSEF
         Y +LRK+F  +L +F
Subjt:  HYTQLRKLFRIQLSEF

Q9SJW9 CDT1-like protein a, chloroplastic

4.4e-28

36.52

Show/hide

Query:  ISSPSS--TLPFKSNKNV-----SSNSTSLLKDPQSLSSKTPKKPAERTRKR---KKVALSIKEVERAAQSVHESNSQLLPHDLTTEGSKVVRRRMDSRS
        +S+P S  ++PFKS K +     SS S +   +P S++  TP+KP E    R   + VALS+KE+ +AA S   S       D     +K       S S
Subjt:  ISSPSS--TLPFKSNKNV-----SSNSTSLLKDPQSLSSKTPKKPAERTRKR---KKVALSIKEVERAAQSVHESNSQLLPHDLTTEGSKVVRRRMDSRS

Query:  NESQSSSSNTTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPE
        + S+  SSN     N    KLPEK+E L KFF+ L+ +M L + +G    FSN+  +IE LT+RRF YSHLAQ+K ILPEAI +K+V + DE T   KP+
Subjt:  NESQSSSSNTTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPE

Query:  LHISFNFGVLAVDSK---ENHYTQLRKLFRIQLSEFI------DDVP------AFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISS
        LH++ N   +  + K   E+    LRK+FR +L++F+      D+VP       FN R + + +    +  V + +E++A    +P++K  SS
Subjt:  LHISFNFGVLAVDSK---ENHYTQLRKLFRIQLSEFI------DDVP------AFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISS

Arabidopsis top hits

e value

%identity

Alignment

AT2G31270.1 homolog of yeast CDT1 A

3.1e-29

36.52

Show/hide

Query:  ISSPSS--TLPFKSNKNV-----SSNSTSLLKDPQSLSSKTPKKPAERTRKR---KKVALSIKEVERAAQSVHESNSQLLPHDLTTEGSKVVRRRMDSRS
        +S+P S  ++PFKS K +     SS S +   +P S++  TP+KP E    R   + VALS+KE+ +AA S   S       D     +K       S S
Subjt:  ISSPSS--TLPFKSNKNV-----SSNSTSLLKDPQSLSSKTPKKPAERTRKR---KKVALSIKEVERAAQSVHESNSQLLPHDLTTEGSKVVRRRMDSRS

Query:  NESQSSSSNTTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPE
        + S+  SSN     N    KLPEK+E L KFF+ L+ +M L + +G    FSN+  +IE LT+RRF YSHLAQ+K ILPEAI +K+V + DE T   KP+
Subjt:  NESQSSSSNTTCVDNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPE

Query:  LHISFNFGVLAVDSK---ENHYTQLRKLFRIQLSEFI------DDVP------AFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISS
        LH++ N   +  + K   E+    LRK+FR +L++F+      D+VP       FN R + + +    +  V + +E++A    +P++K  SS
Subjt:  LHISFNFGVLAVDSK---ENHYTQLRKLFRIQLSEFI------DDVP------AFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISS

AT3G54710.1 homolog of yeast CDT1 B homolog of yeast CDT1 B

1.5e-23

48.28

Show/hide

Query:  KLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPELHISFNFGVLAVDSK--EN
        KLPE+FE+L +FF+ L+ A+RLL+ KG ++ ++N+C KIE LT+R FSY HLAQ+K I PEAI +K+V  F E T   KP LHI  N   + V+      
Subjt:  KLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPELHISFNFGVLAVDSK--EN

Query:  HYTQLRKLFRIQLSEF
         Y +LRK+F  +L +F
Subjt:  HYTQLRKLFRIQLSEF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGGGTGCTTCAAACAAGATTTCTTCACCTTCATCTACTTTACCCTTCAAATCCAACAAAAATGTGAGCTCCAACTCCACATCATTGCTTAAGGATCCGCAGTCTTT
GAGCTCCAAGACGCCGAAGAAGCCGGCGGAGCGAACTAGGAAACGGAAGAAGGTTGCGCTTTCCATTAAAGAGGTTGAACGAGCTGCTCAGAGCGTCCATGAATCTAATA
GTCAGTTGCTGCCTCATGATCTGACCACTGAAGGGAGTAAAGTAGTTAGAAGACGGATGGATTCGCGATCGAATGAAAGTCAATCTAGTAGCTCCAATACTACTTGTGTT
GATAATAAGTTCTCCAATAAATTGCCTGAGAAATTTGAGCTGCTGTGTAAGTTCTTTGATTGCTTGAATTTTGCAATGCGGTTGTTACGATGTAAAGGTGTAGCCTCCAA
CTTCTCCAACGTTTGCTCTAAGATTGAAGTCCTCACTGATAGGAGGTTTTCATACAGTCATTTGGCTCAACTGAAGTTTATTTTACCTGAAGCAATTGTGGTTAAGAAAG
TTGCGGTCTTTGATGAGTGTACCAACTGGAAGAAGCCAGAACTTCATATATCTTTCAATTTTGGTGTCCTCGCTGTAGACAGTAAGGAAAACCATTATACGCAATTGAGG
AAGTTGTTTAGGATACAGCTTTCAGAATTTATTGATGACGTTCCAGCATTCAATTTCAGAACCCAAGATCTTCTCTCAAAAACCAAGACGTTATCTTATGTCAAGACATC
AATTGAGCAACTAGCGCCTGGGCAACCAATGCCATCAGCAAAAGGCATTTCCTCTAATCATAATTCAGAAGAAAATCATGGTTTCCCAATGATTAAATCTACCATGACTG
GTCATGGCCCAAATAAA

mRNA sequence

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Protein sequence

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MAGASNKISSPSSTLPFKSNKNVSSNSTSLLKDPQSLSSKTPKKPAERTRKRKKVALSIKEVERAAQSVHESNSQLLPHDLTTEGSKVVRRRMDSRSNESQSSSSNTTCV
DNKFSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSNVCSKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPELHISFNFGVLAVDSKENHYTQLR
KLFRIQLSEFIDDVPAFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENHGFPMIKSTMTGHGPNK

CSPI03G40710 (gene) of Cucumber (PI 183967) v1 genome