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CSPI03G40960 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G40960
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2
Genome locationChr3:35035003..35040855
RNA-Seq ExpressionCSPI03G40960
SyntenyCSPI03G40960
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR007741 - Ribosomal protein/NADH dehydrogenase domain
IPR016464 - NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141152.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis sativus]2.1e-45100Show/hide
Query:  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

XP_008465169.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis melo]6.0e-4598.95Show/hide
Query:  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRG+LSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

XP_022152373.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Momordica charantia]1.1e-4394.74Show/hide
Query:  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRG LSKNLKELRILLCQ+SPSSAPARAFVEKNYKDLK+LNPKFPILIRECSG+EPQLWARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

XP_022935669.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita moschata]5.1e-4495.79Show/hide
Query:  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRG+LSKNLKELRILLCQ+SPSSAPARAFVEKNYK+LKTLNPKFPILIRECSG+EPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

XP_038906356.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Benincasa hispida]3.0e-4495.79Show/hide
Query:  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRG+LSKNLKELRILLCQSSPSSAPAR FVEKNYKDLKTLNPKFPILIRECSG+EPQLWARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

TrEMBL top hitse value%identityAlignment
A0A0A0LDA2 L51_S25_CI-B8 domain-containing protein1.0e-45100Show/hide
Query:  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

A0A1S3CN67 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 22.9e-4598.95Show/hide
Query:  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRG+LSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

A0A5A7T2I6 NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 22.9e-4598.95Show/hide
Query:  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRG+LSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

A0A6J1DEP8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 25.5e-4494.74Show/hide
Query:  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRG LSKNLKELRILLCQ+SPSSAPARAFVEKNYKDLK+LNPKFPILIRECSG+EPQLWARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

A0A6J1F628 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like2.5e-4495.79Show/hide
Query:  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRG+LSKNLKELRILLCQ+SPSSAPARAFVEKNYK+LKTLNPKFPILIRECSG+EPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

SwissProt top hitse value%identityAlignment
P0CB79 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 21.3e-1851.76Show/hide
Query:  LKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS ++P+LWARY  G E+   L   S  Q+++ALE+++K  AS
Subjt:  LKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

P0CB80 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 21.3e-1851.76Show/hide
Query:  LKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS ++P+LWARY  G E+   L   S  Q+++ALE+++K  AS
Subjt:  LKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

Q02370 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 21.7e-1851.72Show/hide
Query:  RGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLV
        RGKL   L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS ++P+LWARY  G E+   L   S  Q+++ALE+++
Subjt:  RGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLV

Q4R5E2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 21.5e-1751.25Show/hide
Query:  LKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLV
        L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS ++P+LWARY  G E+   L   S  Q+++ALE+++
Subjt:  LKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLV

Q9FIJ2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 23.3e-3875.79Show/hide
Query:  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRG +SK++KELRILLCQSSP+SAP R FVEKNYKDLK+LNPK PILIRECSG++PQ+WARYDMG+ER   L+GL+E QI KALE+LVK GA+
Subjt:  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

Arabidopsis top hitse value%identityAlignment
AT5G47890.1 NADH-ubiquinone oxidoreductase B8 subunit, putative2.4e-3975.79Show/hide
Query:  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRG +SK++KELRILLCQSSP+SAP R FVEKNYKDLK+LNPK PILIRECSG++PQ+WARYDMG+ER   L+GL+E QI KALE+LVK GA+
Subjt:  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGGAGAGGAAAGCTATCCAAGAATTTGAAGGAGCTTCGGATCTTACTCTGCCAATCATCTCCTTCAAGCGCCCCCGCTAGGGCTTTTGTTGAAAAAAATTACAA
GGACCTCAAGACTTTGAATCCTAAATTTCCAATATTGATCCGCGAATGCAGTGGAATCGAGCCCCAATTATGGGCTAGATATGACATGGGCATTGAGAGGGTTGCTCGTC
TGGAGGGGTTGAGTGAGGCACAGATCTCAAAGGCACTCGAAGACCTAGTGAAAGTCGGGGCATCATGA
mRNA sequenceShow/hide mRNA sequence
AATCAAAGGGTCATAGGTAAGATTCATAAACAAAATTCCATTGCTTGTTTAACTTAGCAGTTAGCATCGGGAGAAAAAGGCGATTGGCATTTGGGAAGGGTCCGGGTTCG
TTCATCAGAAGAAGTTCAGTGACGAAAAACAAGCGACACAGGTTGGAAATGGCTTGGAGAGGAAAGCTATCCAAGAATTTGAAGGAGCTTCGGATCTTACTCTGCCAATC
ATCTCCTTCAAGCGCCCCCGCTAGGGCTTTTGTTGAAAAAAATTACAAGGACCTCAAGACTTTGAATCCTAAATTTCCAATATTGATCCGCGAATGCAGTGGAATCGAGC
CCCAATTATGGGCTAGATATGACATGGGCATTGAGAGGGTTGCTCGTCTGGAGGGGTTGAGTGAGGCACAGATCTCAAAGGCACTCGAAGACCTAGTGAAAGTCGGGGCA
TCATGAAGGAATGATCTGCTGTGCTATTGTTACTGGCAACTGACGTTAATAAATGCACGAGTGGAACTTTTGTTGAGATGCACTGTTTACATTCTTTTCGGTCTGCTTCT
ATGAGATTATTGCTCAAAGATTCATCTTGAGTAAACTTGTTTCTGGTACGTAAGCCTATTTGTTTATATGAATAGTTTCTCCGGGAGTGTTATCATAATGGATACTTCTT
GCAATGAGAGATTAGATTGAAATATATTAAAATATGAGAGAATATATTTGAAACCATGAGGATAAATTGAAAAGCACTACAACGTTAAGTAGTAAAGCATTTGATGTATT
TAGCCTTTTGAATGCACACAAGAAGTTGGTAAGTTTAGCAAAGTTTTAAAGTTGATGAGTATTGGGAGTGGC
Protein sequenceShow/hide protein sequence
MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS