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CSPI03G41380 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G41380
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRegulator of rDNA transcription protein 15
Genome locationChr3:35491377..35491610
RNA-Seq ExpressionCSPI03G41380
SyntenyCSPI03G41380
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF1856225.1 hypothetical protein Lal_00046827 [Lupinus albus]6.4e-2990.54Show/hide
Query:  PRRSRSQSVPRSARDDLLSPRKQLEQSTNSRRVRDWDPRAQPSEPILFPRLRIHFADFPYLHCSIDQRLFTLET
        PRR+RSQSVPR AR D LSPR+QLEQST+SRRVRDWDPRAQPSEPILFPRLRIHFADFP LHCSIDQRLFTLET
Subjt:  PRRSRSQSVPRSARDDLLSPRKQLEQSTNSRRVRDWDPRAQPSEPILFPRLRIHFADFPYLHCSIDQRLFTLET

KAF7143926.1 hypothetical protein RHSIM_Rhsim05G0123400 [Rhododendron simsii]1.4e-2886.84Show/hide
Query:  HGPRRSRSQSVPRSARDDLLSPRKQLEQSTNSRRVRDWDPRAQPSEPILFPRLRIHFADFPYLHCSIDQRLFTLET
        HGP +SRSQSVPR ARDD LSPR QLEQST+SRRV+DWDPRAQ SEPILFP+LRIHFADFP LHCSIDQRLFTLET
Subjt:  HGPRRSRSQSVPRSARDDLLSPRKQLEQSTNSRRVRDWDPRAQPSEPILFPRLRIHFADFPYLHCSIDQRLFTLET

KGN59815.1 hypothetical protein Csa_002329 [Cucumis sativus]6.6e-3496.1Show/hide
Query:  MHGPRRSRSQSVPRSARDDLLSPRKQLEQSTNSRRVRDWDPRAQPSEPILFPRLRIHFADFPYLHCSIDQRLFTLET
        MHGPRRSRSQSVP  ARDDLLSPRKQ+EQSTNSRRVRDWDPRAQPSEPILFPRLRIHFADFPYLHCSIDQRLFTLET
Subjt:  MHGPRRSRSQSVPRSARDDLLSPRKQLEQSTNSRRVRDWDPRAQPSEPILFPRLRIHFADFPYLHCSIDQRLFTLET

PHT25643.1 Regulator of rDNA transcription protein 15 [Capsicum baccatum]7.8e-2790Show/hide
Query:  RSQSVPRSARDDLLSPRKQLEQSTNSRRVRDWDPRAQPSEPILFPRLRIHFADFPYLHCSIDQRLFTLET
        RSQSVPR AR D LSPR+QLEQST+SRRVRDWDPRAQPSEPILFP+LRIHFADFP LHCSIDQRLFTLET
Subjt:  RSQSVPRSARDDLLSPRKQLEQSTNSRRVRDWDPRAQPSEPILFPRLRIHFADFPYLHCSIDQRLFTLET

PHT27708.1 hypothetical protein CQW23_32687 [Capsicum baccatum]7.8e-2788.73Show/hide
Query:  SRSQSVPRSARDDLLSPRKQLEQSTNSRRVRDWDPRAQPSEPILFPRLRIHFADFPYLHCSIDQRLFTLET
        +RSQSVPR AR D LSPR+QLEQST+SRRVRDWDPRAQPSEPILFP+LRIHFADFP LHCSIDQRLFTLET
Subjt:  SRSQSVPRSARDDLLSPRKQLEQSTNSRRVRDWDPRAQPSEPILFPRLRIHFADFPYLHCSIDQRLFTLET

TrEMBL top hitse value%identityAlignment
A0A0A0LCS5 Uncharacterized protein3.2e-3496.1Show/hide
Query:  MHGPRRSRSQSVPRSARDDLLSPRKQLEQSTNSRRVRDWDPRAQPSEPILFPRLRIHFADFPYLHCSIDQRLFTLET
        MHGPRRSRSQSVP  ARDDLLSPRKQ+EQSTNSRRVRDWDPRAQPSEPILFPRLRIHFADFPYLHCSIDQRLFTLET
Subjt:  MHGPRRSRSQSVPRSARDDLLSPRKQLEQSTNSRRVRDWDPRAQPSEPILFPRLRIHFADFPYLHCSIDQRLFTLET

A0A0R0GRW0 Uncharacterized protein1.6e-3093.24Show/hide
Query:  PRRSRSQSVPRSARDDLLSPRKQLEQSTNSRRVRDWDPRAQPSEPILFPRLRIHFADFPYLHCSIDQRLFTLET
        PRR+RSQSVPR ARDD LSPRKQLEQST+SRRVRDWDPRAQPSEPILFPRLRIHFADFP LHCSIDQRLFTLET
Subjt:  PRRSRSQSVPRSARDDLLSPRKQLEQSTNSRRVRDWDPRAQPSEPILFPRLRIHFADFPYLHCSIDQRLFTLET

A0A2G2UY60 Regulator of rDNA transcription protein 153.8e-2790Show/hide
Query:  RSQSVPRSARDDLLSPRKQLEQSTNSRRVRDWDPRAQPSEPILFPRLRIHFADFPYLHCSIDQRLFTLET
        RSQSVPR AR D LSPR+QLEQST+SRRVRDWDPRAQPSEPILFP+LRIHFADFP LHCSIDQRLFTLET
Subjt:  RSQSVPRSARDDLLSPRKQLEQSTNSRRVRDWDPRAQPSEPILFPRLRIHFADFPYLHCSIDQRLFTLET

A0A2G2V466 Uncharacterized protein3.8e-2788.73Show/hide
Query:  SRSQSVPRSARDDLLSPRKQLEQSTNSRRVRDWDPRAQPSEPILFPRLRIHFADFPYLHCSIDQRLFTLET
        +RSQSVPR AR D LSPR+QLEQST+SRRVRDWDPRAQPSEPILFP+LRIHFADFP LHCSIDQRLFTLET
Subjt:  SRSQSVPRSARDDLLSPRKQLEQSTNSRRVRDWDPRAQPSEPILFPRLRIHFADFPYLHCSIDQRLFTLET

A0A6A5L9T5 Uncharacterized protein3.1e-2990.54Show/hide
Query:  PRRSRSQSVPRSARDDLLSPRKQLEQSTNSRRVRDWDPRAQPSEPILFPRLRIHFADFPYLHCSIDQRLFTLET
        PRR+RSQSVPR AR D LSPR+QLEQST+SRRVRDWDPRAQPSEPILFPRLRIHFADFP LHCSIDQRLFTLET
Subjt:  PRRSRSQSVPRSARDDLLSPRKQLEQSTNSRRVRDWDPRAQPSEPILFPRLRIHFADFPYLHCSIDQRLFTLET

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATGGCCCCCGAAGGAGCCGTTCCCAGTCCGTCCCCCGGTCGGCACGCGACGACCTGCTCTCGCCGCGGAAGCAGCTCGAGCAGTCCACCAACAGCCGACGGGTTCG
GGACTGGGACCCCCGTGCCCAGCCCTCAGAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCTGACTTCCCTTACCTACATTGTTCCATCGACCAGAGGCTGTTCA
CCTTGGAGACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCATGGCCCCCGAAGGAGCCGTTCCCAGTCCGTCCCCCGGTCGGCACGCGACGACCTGCTCTCGCCGCGGAAGCAGCTCGAGCAGTCCACCAACAGCCGACGGGTTCG
GGACTGGGACCCCCGTGCCCAGCCCTCAGAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCTGACTTCCCTTACCTACATTGTTCCATCGACCAGAGGCTGTTCA
CCTTGGAGACCTGA
Protein sequenceShow/hide protein sequence
MHGPRRSRSQSVPRSARDDLLSPRKQLEQSTNSRRVRDWDPRAQPSEPILFPRLRIHFADFPYLHCSIDQRLFTLET