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CSPI03G41950 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G41950
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionADP-ribosylation factor
Genome locationChr3:36034549..36034904
RNA-Seq ExpressionCSPI03G41950
SyntenyCSPI03G41950
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR006689 - Small GTPase superfamily, ARF/SAR type
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB3461131.1 unnamed protein product [Digitaria exilis]1.5e-0756.34Show/hide
Query:  PSSGSFFLLSPSPSIHLCAALRKKKEHPSYEQRWGLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL
        P+  +   +S SP I L   LR +   P      GLTF KLF+RLF K EMRILMVGLDAAGK TTI YKL
Subjt:  PSSGSFFLLSPSPSIHLCAALRKKKEHPSYEQRWGLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL

KAG6598215.1 hypothetical protein SDJN03_07993, partial [Cucurbita argyrosperma subsp. sororia]1.6e-0963.01Show/hide
Query:  SSGSFFLLSPSPSIH---LCAALRKKKEHPSYEQRWGLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL
        S   FFLLSPS SIH   LC AL       +     GLTF KLF+RLF K EMRILMVGLDAAGK TTI YKL
Subjt:  SSGSFFLLSPSPSIH---LCAALRKKKEHPSYEQRWGLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL

RDX60239.1 ADP-ribosylation factor 2, partial [Mucuna pruriens]6.0e-0961.97Show/hide
Query:  SFFLLSPSPSIHLCAALRKKKEH----PSYEQRWGLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL
        SF LLS S S+ L A  R    H    P  E   GLTF KLF+RLF K EMRILMVGLDAAGK TTI YKL
Subjt:  SFFLLSPSPSIHLCAALRKKKEH----PSYEQRWGLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL

RRT52988.1 hypothetical protein B296_00050132 [Ensete ventricosum]1.1e-0768.42Show/hide
Query:  AALRKKKEHPSYE----QRWGLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL
        A  RKKK   S +     R GLTFAKLF+RLF K EMRILMVGLDAAGK TTI YKL
Subjt:  AALRKKKEHPSYE----QRWGLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL

XP_038885435.1 ADP-ribosylation factor 2-like [Benincasa hispida]1.5e-1268.57Show/hide
Query:  SSGSFFLLSPSPSIHLCAALRKKKEHPSYEQRWGLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL
        S   FFLLS S SIHLCAALR   +        GLTFAKLF+RLF K EMRILMVGLDAAGK TTI YKL
Subjt:  SSGSFFLLSPSPSIHLCAALRKKKEHPSYEQRWGLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL

TrEMBL top hitse value%identityAlignment
A0A0A0LGD5 Uncharacterized protein3.5e-31100Show/hide
Query:  GSFFLLSPSPSIHLCAALRKKKEHPSYEQRWGLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL
        GSFFLLSPSPSIHLCAALRKKKEHPSYEQRWGLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL
Subjt:  GSFFLLSPSPSIHLCAALRKKKEHPSYEQRWGLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL

A0A182BFF6 Putative adp-ribosylation factor 27.2e-0863.79Show/hide
Query:  SIHLCAALRKKKEHPSYEQRWGLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL
        S  + AA R+ +E    E   GLTF KLF+RLF K EMRILMVGLDAAGK TTI YKL
Subjt:  SIHLCAALRKKKEHPSYEQRWGLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL

A0A371E2G0 ADP-ribosylation factor 2 (Fragment)2.9e-0961.97Show/hide
Query:  SFFLLSPSPSIHLCAALRKKKEH----PSYEQRWGLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL
        SF LLS S S+ L A  R    H    P  E   GLTF KLF+RLF K EMRILMVGLDAAGK TTI YKL
Subjt:  SFFLLSPSPSIHLCAALRKKKEH----PSYEQRWGLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL

A0A426YMP4 Uncharacterized protein5.5e-0868.42Show/hide
Query:  AALRKKKEHPSYE----QRWGLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL
        A  RKKK   S +     R GLTFAKLF+RLF K EMRILMVGLDAAGK TTI YKL
Subjt:  AALRKKKEHPSYE----QRWGLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL

A0A6A5LQX7 Uncharacterized protein2.7e-0773.91Show/hide
Query:  EHPSYEQRWGLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL
        E P  E   GLTF KLF+RLF K EMRILMVGLDAAGK TTI YKL
Subjt:  EHPSYEQRWGLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL

SwissProt top hitse value%identityAlignment
P0DH91 ADP-ribosylation factor 2-B1.1e-0883.78Show/hide
Query:  GLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL
        GL+FAKLF+RLF K EMRILMVGLDAAGK TTI YKL
Subjt:  GLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL

P49076 ADP-ribosylation factor1.1e-0883.78Show/hide
Query:  GLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL
        GLTF KLF+RLF K EMRILMVGLDAAGK TTI YKL
Subjt:  GLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL

P51823 ADP-ribosylation factor 21.1e-0883.78Show/hide
Query:  GLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL
        GLTF KLF+RLF K EMRILMVGLDAAGK TTI YKL
Subjt:  GLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL

Q06396 ADP-ribosylation factor 11.1e-0883.78Show/hide
Query:  GLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL
        GLTF KLF+RLF K EMRILMVGLDAAGK TTI YKL
Subjt:  GLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL

Q9LQC8 ADP-ribosylation factor 2-A1.1e-0883.78Show/hide
Query:  GLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL
        GL+FAKLF+RLF K EMRILMVGLDAAGK TTI YKL
Subjt:  GLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL

Arabidopsis top hitse value%identityAlignment
AT1G10630.1 ADP-ribosylation factor A1F7.6e-1083.78Show/hide
Query:  GLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL
        GL+FAKLF+RLF K EMRILMVGLDAAGK TTI YKL
Subjt:  GLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL

AT1G23490.1 ADP-ribosylation factor 17.6e-1083.78Show/hide
Query:  GLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL
        GL+FAKLF+RLF K EMRILMVGLDAAGK TTI YKL
Subjt:  GLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL

AT1G70490.1 Ras-related small GTP-binding family protein7.6e-1083.78Show/hide
Query:  GLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL
        GL+FAKLF+RLF K EMRILMVGLDAAGK TTI YKL
Subjt:  GLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL

AT1G70490.2 Ras-related small GTP-binding family protein7.6e-1083.78Show/hide
Query:  GLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL
        GL+FAKLF+RLF K EMRILMVGLDAAGK TTI YKL
Subjt:  GLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL

AT1G70490.3 Ras-related small GTP-binding family protein7.6e-1083.78Show/hide
Query:  GLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL
        GL+FAKLF+RLF K EMRILMVGLDAAGK TTI YKL
Subjt:  GLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGAAGAGCCATGGCAGACGGGGGACTACCATCATCTGGTTCATTTTTCTTGCTCTCTCCATCCCCTTCAATACACCTTTGTGCAGCTCTCAGAAAAAAGAAGGA
ACATCCGAGTTACGAACAGAGATGGGGGCTCACCTTTGCAAAGCTCTTCAATCGGTTGTTTACTAAACCTGAGATGAGAATTCTGATGGTTGGTCTTGATGCCGCTGGTA
AGACGACGACCATTTTCTATAAACTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGAAGAGCCATGGCAGACGGGGGACTACCATCATCTGGTTCATTTTTCTTGCTCTCTCCATCCCCTTCAATACACCTTTGTGCAGCTCTCAGAAAAAAGAAGGA
ACATCCGAGTTACGAACAGAGATGGGGGCTCACCTTTGCAAAGCTCTTCAATCGGTTGTTTACTAAACCTGAGATGAGAATTCTGATGGTTGGTCTTGATGCCGCTGGTA
AGACGACGACCATTTTCTATAAACTCTAG
Protein sequenceShow/hide protein sequence
MARRAMADGGLPSSGSFFLLSPSPSIHLCAALRKKKEHPSYEQRWGLTFAKLFNRLFTKPEMRILMVGLDAAGKTTTIFYKL