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CSPI03G41960 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G41960
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr3:36037775..36040723
RNA-Seq ExpressionCSPI03G41960
SyntenyCSPI03G41960
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036794.1 uncharacterized protein E6C27_scaffold20G00830 [Cucumis melo var. makuwa]7.6e-3092.21Show/hide
Query:  MEDKVNVPTKRDWKQMGHEGATVAVHEEMKRVQQFPSNSTYATHRLRILNKILQLLSIQRTLSQEEELELLFSGLSL
        MEDKV VP KRDWKQMGHE ATVAVHEEMKRVQ+FPSNSTYATHRLR+LNKILQLLSIQRT+SQEEELELLFSGLSL
Subjt:  MEDKVNVPTKRDWKQMGHEGATVAVHEEMKRVQQFPSNSTYATHRLRILNKILQLLSIQRTLSQEEELELLFSGLSL
KAG6591989.1 hypothetical protein SDJN03_14335, partial [Cucurbita argyrosperma subsp. sororia]1.5e-2279.22Show/hide
Query:  MEDKVNVPTKRDWKQMGHEGATVAVHEEMKRVQQFPSNSTYATHRLRILNKILQLLSIQRTLSQEEELELLFSGLSL
        ME KV+V  K D KQMGH+ A V V EEMKRVQQ PSNSTYATHR+R+LNKILQLLSIQRT SQEEELELLF+GLSL
Subjt:  MEDKVNVPTKRDWKQMGHEGATVAVHEEMKRVQQFPSNSTYATHRLRILNKILQLLSIQRTLSQEEELELLFSGLSL
XP_004150100.1 uncharacterized protein LOC101214758 [Cucumis sativus]4.3e-33100Show/hide
Query:  MEDKVNVPTKRDWKQMGHEGATVAVHEEMKRVQQFPSNSTYATHRLRILNKILQLLSIQRTLSQEEELELLFSGLSL
        MEDKVNVPTKRDWKQMGHEGATVAVHEEMKRVQQFPSNSTYATHRLRILNKILQLLSIQRTLSQEEELELLFSGLSL
Subjt:  MEDKVNVPTKRDWKQMGHEGATVAVHEEMKRVQQFPSNSTYATHRLRILNKILQLLSIQRTLSQEEELELLFSGLSL
XP_022139403.1 uncharacterized protein LOC111010342 [Momordica charantia]1.6e-2479.22Show/hide
Query:  MEDKVNVPTKRDWKQMGHEGATVAVHEEMKRVQQFPSNSTYATHRLRILNKILQLLSIQRTLSQEEELELLFSGLSL
        ME KV+ P K +WKQMGHE  TV VH+EMKRVQQ PSNS YATHR R+LNKILQLLSIQRT SQEEELELLF+GLSL
Subjt:  MEDKVNVPTKRDWKQMGHEGATVAVHEEMKRVQQFPSNSTYATHRLRILNKILQLLSIQRTLSQEEELELLFSGLSL
XP_038898294.1 uncharacterized protein LOC120085994 [Benincasa hispida]1.8e-2380.52Show/hide
Query:  MEDKVNVPTKRDWKQMGHEGATVAVHEEMKRVQQFPSNSTYATHRLRILNKILQLLSIQRTLSQEEELELLFSGLSL
        ME K  V  KR WKQM H+ AT AVHEEMKRVQ+ PSNSTYATHRLR+LNKILQLLSIQRT+SQEEELELLF+GLSL
Subjt:  MEDKVNVPTKRDWKQMGHEGATVAVHEEMKRVQQFPSNSTYATHRLRILNKILQLLSIQRTLSQEEELELLFSGLSL
TrEMBL top hitse value%identityAlignment
A0A0A0LFX0 Uncharacterized protein2.1e-33100Show/hide
Query:  MEDKVNVPTKRDWKQMGHEGATVAVHEEMKRVQQFPSNSTYATHRLRILNKILQLLSIQRTLSQEEELELLFSGLSL
        MEDKVNVPTKRDWKQMGHEGATVAVHEEMKRVQQFPSNSTYATHRLRILNKILQLLSIQRTLSQEEELELLFSGLSL
Subjt:  MEDKVNVPTKRDWKQMGHEGATVAVHEEMKRVQQFPSNSTYATHRLRILNKILQLLSIQRTLSQEEELELLFSGLSL
A0A5A7SZV0 Uncharacterized protein3.7e-3092.21Show/hide
Query:  MEDKVNVPTKRDWKQMGHEGATVAVHEEMKRVQQFPSNSTYATHRLRILNKILQLLSIQRTLSQEEELELLFSGLSL
        MEDKV VP KRDWKQMGHE ATVAVHEEMKRVQ+FPSNSTYATHRLR+LNKILQLLSIQRT+SQEEELELLFSGLSL
Subjt:  MEDKVNVPTKRDWKQMGHEGATVAVHEEMKRVQQFPSNSTYATHRLRILNKILQLLSIQRTLSQEEELELLFSGLSL
A0A6J1CCW1 uncharacterized protein LOC1110103427.9e-2579.22Show/hide
Query:  MEDKVNVPTKRDWKQMGHEGATVAVHEEMKRVQQFPSNSTYATHRLRILNKILQLLSIQRTLSQEEELELLFSGLSL
        ME KV+ P K +WKQMGHE  TV VH+EMKRVQQ PSNS YATHR R+LNKILQLLSIQRT SQEEELELLF+GLSL
Subjt:  MEDKVNVPTKRDWKQMGHEGATVAVHEEMKRVQQFPSNSTYATHRLRILNKILQLLSIQRTLSQEEELELLFSGLSL
A0A6J1F6C2 uncharacterized protein LOC1114425871.3e-2279.22Show/hide
Query:  MEDKVNVPTKRDWKQMGHEGATVAVHEEMKRVQQFPSNSTYATHRLRILNKILQLLSIQRTLSQEEELELLFSGLSL
        ME KV+V  K + KQMGH+ A V V EEMKRVQQ PSNSTYATHRLR+LNKILQLLSIQRT SQEEELELLF+GLSL
Subjt:  MEDKVNVPTKRDWKQMGHEGATVAVHEEMKRVQQFPSNSTYATHRLRILNKILQLLSIQRTLSQEEELELLFSGLSL
A0A6J1IHD5 uncharacterized protein LOC1114769581.3e-2279.22Show/hide
Query:  MEDKVNVPTKRDWKQMGHEGATVAVHEEMKRVQQFPSNSTYATHRLRILNKILQLLSIQRTLSQEEELELLFSGLSL
        ME KV+V  K + KQMGH+ A V V EEMKRVQQ PSNSTYATHRLR+LNKILQLLSIQRT SQEEELELLF+GLSL
Subjt:  MEDKVNVPTKRDWKQMGHEGATVAVHEEMKRVQQFPSNSTYATHRLRILNKILQLLSIQRTLSQEEELELLFSGLSL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13677.1 unknown protein2.3e-0849.06Show/hide
Query:  WKQMGHEGATVAVHEEMKRVQQFPSNSTYATHRLRILNKILQLLSIQRTLSQE
        W +M  +  +  + EE+KRV + PSNS YA HRL++LNKI  LLS+Q  +S+E
Subjt:  WKQMGHEGATVAVHEEMKRVQQFPSNSTYATHRLRILNKILQLLSIQRTLSQE
AT3G13677.2 unknown protein7.3e-1560Show/hide
Query:  WKQMGHEGATVAVHEEMKRVQQFPSNSTYATHRLRILNKILQLLSIQRTLSQEEELELLFSGLSL
        W +M  +  +  + EE+KRV + PSNS YA HRL++LNKI  LLS+QRTLSQE+ELELLF+ LSL
Subjt:  WKQMGHEGATVAVHEEMKRVQQFPSNSTYATHRLRILNKILQLLSIQRTLSQEEELELLFSGLSL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATAAAGTCAATGTCCCAACTAAAAGAGATTGGAAACAAATGGGACATGAAGGGGCAACTGTAGCTGTTCATGAAGAAATGAAACGAGTGCAACAGTTTCCTTC
TAACAGTACCTATGCTACTCATCGTTTGCGGATTTTAAACAAAATTCTGCAGCTTTTATCAATTCAGAGAACTCTATCTCAGGAAGAGGAACTGGAGTTGCTGTTTTCTG
GGCTTTCCTTGTGA
mRNA sequenceShow/hide mRNA sequence
GATAAATATCACCGACTAACCGAATAAAACCGAAGACGAGAAAGTAAAATATTGGAACCATAAAACGACGTGGTTTCTTGCAATAGCTATCCCGGAGATTTTGCCCTGCC
GCCGCCGGTGAGTTCTTTAGATTTTCTTTTTCTTTAGCTTTCTTTATAGGCTCAATCCACAGTTTTCTGTTTGGTTCCCGAGAAGAGATCCTGAATTATTTTTTTTCTCG
ACGCAGAAAAAACTAGGCCATTTCTAGATTATCTGGTTCATTAACGGACAATGGAAGATAAAGTCAATGTCCCAACTAAAAGAGATTGGAAACAAATGGGACATGAAGGG
GCAACTGTAGCTGTTCATGAAGAAATGAAACGAGTGCAACAGTTTCCTTCTAACAGTACCTATGCTACTCATCGTTTGCGGATTTTAAACAAAATTCTGCAGCTTTTATC
AATTCAGAGAACTCTATCTCAGGAAGAGGAACTGGAGTTGCTGTTTTCTGGGCTTTCCTTGTGATAAGTTGTAGCTAGAGAATGGCTGGTACAGTTTCACTTCTCTATAC
AAATACAATTACAGAATGAAAGGTGGTTAGGATTTTGTTGGTCATCCTCGGTATATCATAACCATATCGTATATGTTTCTGTATCAATATCCTTAAATGCTTATCAGATG
CCCTCCTAGGGACAATATCCTTAATCCTTAAATGTTTAAGTTGCAAAATGAACAATCAATGTGATTATCCCTTTCACTTTCATCTCCCATCGATGATCATTTCATTTGCA
TTATTTTAATCATGCAAGCCATGTATTATTAAGGAAGTCTCAAACCATTGAATGTATGTGTTTTACTTTTTAT
Protein sequenceShow/hide protein sequence
MEDKVNVPTKRDWKQMGHEGATVAVHEEMKRVQQFPSNSTYATHRLRILNKILQLLSIQRTLSQEEELELLFSGLSL