; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G42120 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G42120
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionNAC domain protein
Genome locationChr3:36184661..36185179
RNA-Seq ExpressionCSPI03G42120
SyntenyCSPI03G42120
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036871.1 uncharacterized protein E6C27_scaffold20G001820 [Cucumis melo var. makuwa]3.1e-4494.9Show/hide
Query:  MPTIFQSQPPPRRTPSVAGREPGRNRAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMAES
        MPTIFQSQPPPRR+PSVAGRE GR RAVRSTCRS SFGGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLS+MSMAES
Subjt:  MPTIFQSQPPPRRTPSVAGREPGRNRAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMAES

KAG6607862.1 hypothetical protein SDJN03_01204, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2469.39Show/hide
Query:  MPTIFQSQPPPRRTPSVAG--REPGRNRAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMA
        MPTIFQSQ  P   PS AG  RE GR+R++RS CRS SFGG+ RGGRN+ A  GD+ RR QG RE+LRRAL PP+RRPTLRW+NFR TPSRLS MSMA
Subjt:  MPTIFQSQPPPRRTPSVAG--REPGRNRAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMA

KAG7024857.1 hypothetical protein SDJN02_13676, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-3174.26Show/hide
Query:  MPTIFQSQPPPRRTPSV---AGREPGRNRAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMAE
        MPTIFQSQP P R PS+   AGREP  +R++RSTCRSFSF GMVR GRN+M   GD+ RRNQG REVLRRALMPP+R+PTLRW+NFRPTPSRLS MSMAE
Subjt:  MPTIFQSQPPPRRTPSV---AGREPGRNRAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMAE

Query:  S
        +
Subjt:  S

KGN60027.2 hypothetical protein Csa_001878 [Cucumis sativus]5.1e-4798.98Show/hide
Query:  MPTIFQSQPPPRRTPSVAGREPGRNRAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMAES
        MPTIFQSQPPPRRTPSVAGREPGRNRAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMAE+
Subjt:  MPTIFQSQPPPRRTPSVAGREPGRNRAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMAES

XP_011652880.1 uncharacterized protein LOC105435142 [Cucumis sativus]2.3e-47100Show/hide
Query:  MPTIFQSQPPPRRTPSVAGREPGRNRAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMAES
        MPTIFQSQPPPRRTPSVAGREPGRNRAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMAES
Subjt:  MPTIFQSQPPPRRTPSVAGREPGRNRAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMAES

TrEMBL top hitse value%identityAlignment
A0A0A0LD23 Uncharacterized protein1.1e-47100Show/hide
Query:  MPTIFQSQPPPRRTPSVAGREPGRNRAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMAES
        MPTIFQSQPPPRRTPSVAGREPGRNRAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMAES
Subjt:  MPTIFQSQPPPRRTPSVAGREPGRNRAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMAES

A0A4U5P590 Uncharacterized protein1.3e-1148.42Show/hide
Query:  QPPPRRTPSVAGREPGRNRAV------RSTCRSFSFGGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMA
        QPP R++     R    N+        RSTC   +  G VR  ++   +P D+ RRNQ + E+LRRAL PP+RR TLRW NF+PTPSRLS MSMA
Subjt:  QPPPRRTPSVAGREPGRNRAV------RSTCRSFSFGGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMA

A0A5A7T5L7 Uncharacterized protein1.5e-4494.9Show/hide
Query:  MPTIFQSQPPPRRTPSVAGREPGRNRAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMAES
        MPTIFQSQPPPRR+PSVAGRE GR RAVRSTCRS SFGGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLS+MSMAES
Subjt:  MPTIFQSQPPPRRTPSVAGREPGRNRAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMAES

A0A6N2MHB8 Uncharacterized protein2.0e-1248.15Show/hide
Query:  MPTIFQSQP------PPRRTPSVAGREPGRNRAV------RSTCRSFSFGGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPS
        M TI Q Q       P R++P    R    N+A       RSTC   +  G VR  ++   +P DR RR+Q +RE+LRRAL PP+RR TLRW NF+PTPS
Subjt:  MPTIFQSQP------PPRRTPSVAGREPGRNRAV------RSTCRSFSFGGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPS

Query:  RLSIMSMA
        RLS MSMA
Subjt:  RLSIMSMA

B9N1L2 Uncharacterized protein4.4e-1248.15Show/hide
Query:  MPTIFQSQ-----PPPRRTPSVAGREPGRNRAV-------RSTCRSFSFGGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPS
        M TI Q Q      PP R     G    RN  V       RSTC   +  G VR  ++   +P D+ RRNQ + E+LRRAL PP+RR TLRW NF+PTPS
Subjt:  MPTIFQSQ-----PPPRRTPSVAGREPGRNRAV-------RSTCRSFSFGGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPS

Query:  RLSIMSMA
        RLS MSMA
Subjt:  RLSIMSMA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G15518.1 unknown protein8.2e-1147Show/hide
Query:  RRTPSVAGRE-PGRNRAVRSTCRSFSFGGMVRGGRNLMALPGD-RCRR---------------NQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMS
        RR PS  G E PGR+   R   RS   G  VR        PG  +C R               + GSREVLRRAL PP RR  LRW+NFRPTPSRL  MS
Subjt:  RRTPSVAGRE-PGRNRAVRSTCRSFSFGGMVRGGRNLMALPGD-RCRR---------------NQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCACCATTTTTCAGTCCCAACCCCCGCCTCGCCGGACCCCCTCCGTTGCTGGAAGAGAACCTGGCCGGAACCGTGCCGTTAGATCCACTTGCAGGAGCTTTAGTTT
TGGTGGGATGGTAAGAGGTGGCCGCAATCTGATGGCGCTGCCCGGAGATAGGTGCCGCCGGAATCAGGGAAGCAGAGAGGTTCTAAGAAGGGCTTTGATGCCGCCGAGCC
GGAGACCCACACTCCGATGGATGAATTTCCGGCCAACTCCCAGTCGTCTTTCGATAATGTCTATGGCGGAAAGTTAA
mRNA sequenceShow/hide mRNA sequence
AATTCCACCTTTCTTCTCCAAATTTTCCATCTCCCTCTTCAATTTTAATTATTCAAACAAAGACAAAGAAAGAAAAAAAAATGCCCACCATTTTTCAGTCCCAACCCCCG
CCTCGCCGGACCCCCTCCGTTGCTGGAAGAGAACCTGGCCGGAACCGTGCCGTTAGATCCACTTGCAGGAGCTTTAGTTTTGGTGGGATGGTAAGAGGTGGCCGCAATCT
GATGGCGCTGCCCGGAGATAGGTGCCGCCGGAATCAGGGAAGCAGAGAGGTTCTAAGAAGGGCTTTGATGCCGCCGAGCCGGAGACCCACACTCCGATGGATGAATTTCC
GGCCAACTCCCAGTCGTCTTTCGATAATGTCTATGGCGGAAAGTTAATTGATTAATTTTGTTTTTTGGGATTATTCTTTGATTCTTATTCAACAAATTTCTGGGATTTTC
TTTGTATGTATGGAGTATCTATGGATGATTCAGTTACTCATTTTTGGAGTGAAATTTCGGAATCCTTCGTGGTTTTGTT
Protein sequenceShow/hide protein sequence
MPTIFQSQPPPRRTPSVAGREPGRNRAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMAES