; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G42930 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G42930
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description50S ribosomal protein L31
Genome locationChr3:36850203..36851272
RNA-Seq ExpressionCSPI03G42930
SyntenyCSPI03G42930
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002150 - Ribosomal protein L31
IPR034704 - L28p-like
IPR042105 - Ribosomal protein L31 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041569.1 50S ribosomal protein L31 [Cucumis melo var. makuwa]3.2e-6898.51Show/hide
Query:  MALNLTNSFLQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        MALNLTNSFLQLQRPISPAVAPPK KESGARS+RPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
Subjt:  MALNLTNSFLQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
        RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
Subjt:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK

XP_004147854.2 50S ribosomal protein L31, chloroplastic [Cucumis sativus]2.2e-69100Show/hide
Query:  MALNLTNSFLQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        MALNLTNSFLQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
Subjt:  MALNLTNSFLQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
        RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
Subjt:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK

XP_008466538.1 PREDICTED: 50S ribosomal protein L31, chloroplastic [Cucumis melo]3.2e-6898.51Show/hide
Query:  MALNLTNSFLQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        MALNLTNSFLQLQRPISPAVAPPK KESGARS+RPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
Subjt:  MALNLTNSFLQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
        RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
Subjt:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK

XP_023523361.1 50S ribosomal protein L31, chloroplastic-like [Cucurbita pepo subsp. pepo]7.6e-6291.11Show/hide
Query:  MALNLTNSFLQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        MALNLTNSF  LQRP SPA+APPK KE GAR YRPVVTCRKKD+HPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
Subjt:  MALNLTNSFLQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIILPSKRKS-AKGKKK
        RKKFGELSQLMEIPVLKGEI+LP+KRKS  KGKKK
Subjt:  RKKFGELSQLMEIPVLKGEIILPSKRKS-AKGKKK

XP_038896266.1 50S ribosomal protein L31, chloroplastic [Benincasa hispida]2.1e-6492.54Show/hide
Query:  MALNLTNSFLQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        MALNLTNSFLQLQRP S AVAPPK KESGAR++RPVVTCRKKDLHPQFYED+KVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
Subjt:  MALNLTNSFLQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
        RKKFGELSQLMEIPVLKGEI+LP+K+KS KGKKK
Subjt:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK

TrEMBL top hitse value%identityAlignment
A0A0A0LDC9 50S ribosomal protein L311.1e-69100Show/hide
Query:  MALNLTNSFLQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        MALNLTNSFLQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
Subjt:  MALNLTNSFLQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
        RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
Subjt:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK

A0A1S3CRJ2 50S ribosomal protein L31, chloroplastic1.5e-6898.51Show/hide
Query:  MALNLTNSFLQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        MALNLTNSFLQLQRPISPAVAPPK KESGARS+RPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
Subjt:  MALNLTNSFLQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
        RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
Subjt:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK

A0A5A7TJN6 50S ribosomal protein L31, chloroplastic1.5e-6898.51Show/hide
Query:  MALNLTNSFLQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        MALNLTNSFLQLQRPISPAVAPPK KESGARS+RPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
Subjt:  MALNLTNSFLQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
        RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
Subjt:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK

A0A6J1IKY2 50S ribosomal protein L312.4e-6191.85Show/hide
Query:  MALNLTNSFLQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        MALNLTNSF  LQRPISP VAPPK+KE GARS+R VVTCRKKDLHPQF+EDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
Subjt:  MALNLTNSFLQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIILPSKRKS-AKGKKK
        RKKFGELSQLMEIPVLKGEIILP+KRKS  KGKKK
Subjt:  RKKFGELSQLMEIPVLKGEIILPSKRKS-AKGKKK

E5GCI4 50S ribosomal protein L31, chloroplastic1.5e-6898.51Show/hide
Query:  MALNLTNSFLQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        MALNLTNSFLQLQRPISPAVAPPK KESGARS+RPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
Subjt:  MALNLTNSFLQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
        RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
Subjt:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK

SwissProt top hitse value%identityAlignment
P82249 50S ribosomal protein L31, chloroplastic1.1e-4467.91Show/hide
Query:  MALNLTNSFLQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        M L L+N FL         +  PK   S   + RP  +CRK D+HP+F EDAKVYCNGELVMTTGGTQK+Y+V+VWSGNHPFYLG+RSALL+DADQVEKF
Subjt:  MALNLTNSFLQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
        RKK+GEL+Q+MEIPVLKGEIILP K+KS K KKK
Subjt:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK

Q31L35 50S ribosomal protein L313.5e-1758.82Show/hide
Query:  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDAD-QVEKFRKKFGEL
        K D+HPQ+Y +AKVYCNGE VMT G TQ E  VDVWSGNHPFY G++   ++D + +VE+F +K+G L
Subjt:  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDAD-QVEKFRKKFGEL

Q5N0T7 50S ribosomal protein L313.5e-1758.82Show/hide
Query:  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDAD-QVEKFRKKFGEL
        K D+HPQ+Y +AKVYCNGE VMT G TQ E  VDVWSGNHPFY G++   ++D + +VE+F +K+G L
Subjt:  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDAD-QVEKFRKKFGEL

Q7V9Y9 50S ribosomal protein L313.5e-1758.46Show/hide
Query:  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFG
        KKD+HP +Y DAKV CNGE+VMTTG TQ E  VDVWSGNHPF+ G++  L  +  +V++F +K+G
Subjt:  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFG

Q9FWS4 50S ribosomal protein L31, chloroplastic1.0e-4564.58Show/hide
Query:  MALNLTNSF---------LQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALL
        MA++L NSF         LQL++P+  AV   K+    + +    +TCRKK+LHP+F+EDAKVYCNGELVMTTGGT+KEY VDVWSGNHPFYLG+RSAL+
Subjt:  MALNLTNSF---------LQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALL

Query:  VDADQVEKFRKKFGELSQLMEIPVLKGEIILPSKR-KSAKGKKK
        VDADQVEKFRK+F  LS++MEIPVLKGEII+P+K+ K  KGKKK
Subjt:  VDADQVEKFRKKFGELSQLMEIPVLKGEIILPSKR-KSAKGKKK

Arabidopsis top hitse value%identityAlignment
AT1G75350.1 Ribosomal protein L317.4e-4764.58Show/hide
Query:  MALNLTNSF---------LQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALL
        MA++L NSF         LQL++P+  AV   K+    + +    +TCRKK+LHP+F+EDAKVYCNGELVMTTGGT+KEY VDVWSGNHPFYLG+RSAL+
Subjt:  MALNLTNSF---------LQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALL

Query:  VDADQVEKFRKKFGELSQLMEIPVLKGEIILPSKR-KSAKGKKK
        VDADQVEKFRK+F  LS++MEIPVLKGEII+P+K+ K  KGKKK
Subjt:  VDADQVEKFRKKFGELSQLMEIPVLKGEIILPSKR-KSAKGKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTCAACCTAACCAATTCCTTCCTTCAACTTCAACGCCCAATTTCCCCCGCCGTTGCACCGCCCAAGCGCAAGGAATCTGGAGCTAGAAGTTACCGGCCGGTGGT
GACCTGCCGGAAAAAGGATCTGCACCCCCAATTTTACGAGGATGCTAAGGTTTATTGCAATGGAGAATTAGTTATGACGACCGGCGGGACCCAGAAAGAGTATTCAGTGG
ACGTGTGGTCGGGAAACCACCCGTTCTATTTGGGAAGCCGATCCGCCCTGCTCGTCGACGCCGATCAGGTCGAGAAATTCCGCAAGAAATTCGGAGAGCTGTCGCAGTTG
ATGGAGATTCCTGTTCTTAAGGGCGAAATCATTCTGCCCTCAAAGCGTAAATCCGCAAAAGGGAAGAAGAAGTAG
mRNA sequenceShow/hide mRNA sequence
GCCCAACATTAGCAAGCCCAAAAAGGGAAAAAGAAATGAGTGAGTGGAGACGCGACAAGGCCTTGAAGACTCAAGAGGAGCTCATCTCCCTCTTATCCTCACGCACCACA
ACCAAACGCAGCAATGGCGCTCAACCTAACCAATTCCTTCCTTCAACTTCAACGCCCAATTTCCCCCGCCGTTGCACCGCCCAAGCGCAAGGAATCTGGAGCTAGAAGTT
ACCGGCCGGTGGTGACCTGCCGGAAAAAGGATCTGCACCCCCAATTTTACGAGGATGCTAAGGTTTATTGCAATGGAGAATTAGTTATGACGACCGGCGGGACCCAGAAA
GAGTATTCAGTGGACGTGTGGTCGGGAAACCACCCGTTCTATTTGGGAAGCCGATCCGCCCTGCTCGTCGACGCCGATCAGGTCGAGAAATTCCGCAAGAAATTCGGAGA
GCTGTCGCAGTTGATGGAGATTCCTGTTCTTAAGGGCGAAATCATTCTGCCCTCAAAGCGTAAATCCGCAAAAGGGAAGAAGAAGTAGAAGATTCTGAAGATTTCAGTTG
GCTTGGTAATCGGTTAAATTCCAAATGCATATTGAGATTTTTGGTTCTTTCAATTACTTTATATATCCTCCATGTAATTTAGCAAAATGGACTCTAATTTGTGTGAACCA
AACGATTTGTTTCTTTGCCTCGCATTGCCTTTGCTATTTATCCTGAACGCTCAAACTGTTGATGAAGTTCTGAATGCACCAATCGATTAGTGTTTGGCGGTGGGTGAGAA
AATTCATGAAGGAACAGAAAGTTTGAGAAATTAGAATACGAATTGATTGGTAAGCGACGATTTTGGGCGTTTTTGAATTTTCTTCAATGGATCTTTGGCTCATTTGTCAT
TAGGGGATTTCCTAGTTTTAAAACTTAGGTGATGGTAAAGATACAAACTATTTGAAGGTTAAAGACAAAAGGAGCTGGTCTTAAATTATGATAGAG
Protein sequenceShow/hide protein sequence
MALNLTNSFLQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQL
MEIPVLKGEIILPSKRKSAKGKKK