CuGenDBv2

Gene ID	CSPI03G43670
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	LYR motif-containing protein 2
Genome location	Chr3:37492601..37493471
RNA-Seq Expression	CSPI03G43670
Synteny	CSPI03G43670
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0063314.1 LYR motif-containing protein 2 [Cucumis melo var. makuwa]

2.8e-35

98.77

Show/hide

Query:  MVFSHDLREFILRARVLKLYRQGLRTARKAPVDGRDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLKRLDEMLDMQGH
        MVFSHDLREFILRARVLKLYRQGLRTARKAPVDGRDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLK+LDEMLDMQGH
Subjt:  MVFSHDLREFILRARVLKLYRQGLRTARKAPVDGRDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLKRLDEMLDMQGH

XP_004136367.1 LYR motif-containing protein 2 [Cucumis sativus]

9.7e-36

100

Show/hide

Query:  MVFSHDLREFILRARVLKLYRQGLRTARKAPVDGRDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLKRLDEMLDMQGH
        MVFSHDLREFILRARVLKLYRQGLRTARKAPVDGRDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLKRLDEMLDMQGH
Subjt:  MVFSHDLREFILRARVLKLYRQGLRTARKAPVDGRDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLKRLDEMLDMQGH

XP_008466455.1 PREDICTED: LYR motif-containing protein 2 [Cucumis melo]

1.4e-34

97.53

Show/hide

Query:  MVFSHDLREFILRARVLKLYRQGLRTARKAPVDGRDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLKRLDEMLDMQGH
        MVFSHDLREFILRARVLKLYRQGLR ARKAPVDGRDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLK+LDEMLDMQGH
Subjt:  MVFSHDLREFILRARVLKLYRQGLRTARKAPVDGRDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLKRLDEMLDMQGH

XP_022936861.1 uncharacterized protein LOC111443321 [Cucurbita moschata]

3.1e-26

80.25

Show/hide

Query:  MVFSHDLREFILRARVLKLYRQGLRTARKAPVDGRDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLKRLDEMLDMQGH
        MV + DL+EFILRARVLKLYRQ LRT RKAPV  R+ELRH +R+EME NR C+DRQK+RFLLSEGIERLKRLDEMLDMQGH
Subjt:  MVFSHDLREFILRARVLKLYRQGLRTARKAPVDGRDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLKRLDEMLDMQGH

XP_023535371.1 uncharacterized protein LOC111796833 [Cucurbita pepo subsp. pepo]

1.8e-26

80.25

Show/hide

Query:  MVFSHDLREFILRARVLKLYRQGLRTARKAPVDGRDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLKRLDEMLDMQGH
        MV + DL+EFILRARVLKLYRQ LRT RKAPV  R+ELRH +R+EME NR C+DRQK+RFLLSEGIERLKRLDEMLDMQGH
Subjt:  MVFSHDLREFILRARVLKLYRQGLRTARKAPVDGRDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLKRLDEMLDMQGH

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CRB8 LYR motif-containing protein 2

6.8e-35

97.53

Show/hide

Query:  MVFSHDLREFILRARVLKLYRQGLRTARKAPVDGRDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLKRLDEMLDMQGH
        MVFSHDLREFILRARVLKLYRQGLR ARKAPVDGRDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLK+LDEMLDMQGH
Subjt:  MVFSHDLREFILRARVLKLYRQGLRTARKAPVDGRDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLKRLDEMLDMQGH

A0A5A7V7X8 LYR motif-containing protein 2

1.4e-35

98.77

Show/hide

Query:  MVFSHDLREFILRARVLKLYRQGLRTARKAPVDGRDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLKRLDEMLDMQGH
        MVFSHDLREFILRARVLKLYRQGLRTARKAPVDGRDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLK+LDEMLDMQGH
Subjt:  MVFSHDLREFILRARVLKLYRQGLRTARKAPVDGRDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLKRLDEMLDMQGH

A0A5D3E7B8 LYR motif-containing protein 2

6.8e-35

97.53

Show/hide

Query:  MVFSHDLREFILRARVLKLYRQGLRTARKAPVDGRDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLKRLDEMLDMQGH
        MVFSHDLREFILRARVLKLYRQGLR ARKAPVDGRDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLK+LDEMLDMQGH
Subjt:  MVFSHDLREFILRARVLKLYRQGLRTARKAPVDGRDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLKRLDEMLDMQGH

A0A6J1F8N3 uncharacterized protein LOC111443321

1.5e-26

80.25

Show/hide

Query:  MVFSHDLREFILRARVLKLYRQGLRTARKAPVDGRDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLKRLDEMLDMQGH
        MV + DL+EFILRARVLKLYRQ LRT RKAPV  R+ELRH +R+EME NR C+DRQK+RFLLSEGIERLKRLDEMLDMQGH
Subjt:  MVFSHDLREFILRARVLKLYRQGLRTARKAPVDGRDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLKRLDEMLDMQGH

A0A6J1IFA5 uncharacterized protein LOC111476418

4.4e-26

80.25

Show/hide

Query:  MVFSHDLREFILRARVLKLYRQGLRTARKAPVDGRDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLKRLDEMLDMQGH
        MV + DL+EFILRARVLKLYRQ LRT RKAPV  R+ELRH +R+EME NR C+DRQKIRFLLSEG ERLKRLDEMLDMQGH
Subjt:  MVFSHDLREFILRARVLKLYRQGLRTARKAPVDGRDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLKRLDEMLDMQGH

SwissProt top hits

e value

%identity

Alignment

Q5RES3 LYR motif-containing protein 2

2.7e-04

36.62

Show/hide

Query:  LREFILRARVLKLYRQGLRTARKAPVDG-RDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLKRLDEML
        L++F+ R +VL LYR+ L+T R+ P D  R  L+   REE ++N+   +   IR ++++G  +LK L++ L
Subjt:  LREFILRARVLKLYRQGLRTARKAPVDG-RDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLKRLDEML

Q8R033 LYR motif-containing protein 2

7.8e-04

36.62

Show/hide

Query:  LREFILRARVLKLYRQGLRTARKAPVDG-RDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLKRLDEML
        L++F+ R +VL LYR+ LR  R+ P D  R  L+   REE ++N+   +   IR ++++G  +LK L+  L
Subjt:  LREFILRARVLKLYRQGLRTARKAPVDG-RDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLKRLDEML

Q9NU23 LYR motif-containing protein 2

3.5e-04

36.62

Show/hide

Query:  LREFILRARVLKLYRQGLRTARKAPVDG-RDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLKRLDEML
        L++F+ R +VL LYR+ L+T R+ P D  R  L+   REE  +N+   +   IR ++++G  +LK L++ L
Subjt:  LREFILRARVLKLYRQGLRTARKAPVDG-RDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLKRLDEML

Arabidopsis top hits

e value

%identity

Alignment

AT1G76065.1 LYR family of Fe/S cluster biogenesis protein

1.4e-24

71.05

Show/hide

Query:  DLREFILRARVLKLYRQGLRTARKAPVDGRDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLKRLDEMLDMQGH
        DL+ FILRARVLKLYRQ L+ A +APV  R EL+  +R+EMEKNR CND+QKIR+L+SEG+ER+K LDEMLDMQGH
Subjt:  DLREFILRARVLKLYRQGLRTARKAPVDGRDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLKRLDEMLDMQGH

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTTTTCTCCCATGATTTACGTGAATTTATTCTTCGAGCAAGAGTGTTGAAACTGTATAGACAGGGTTTAAGAACAGCTCGGAAAGCGCCTGTTGATGGTCGAGATGA
ATTGAGGCATATGATGAGAGAAGAAATGGAGAAGAACAGAAAGTGTAATGATAGACAGAAAATAAGATTTTTGTTGAGCGAAGGAATAGAGCGATTGAAGCGTCTAGATG
AGATGTTGGATATGCAAGGCCATTAG

mRNA sequence

Show/hide mRNA sequence

TGCCAGGCTACTCAAGATCAAAATCGGTCTTCTGTCGTTGAATCCTCAAAGAAATCGGAACCGAACGAGAGAAATGATTATACCTCCGATTGAATCAAGCATGGAATTCG
CTTCACTTTAATCTGCACCATCAGTGTTATCCTCTTCATTTTGATCATTAAGAGAGATCGCGATGGTTTTCTCCCATGATTTACGTGAATTTATTCTTCGAGCAAGAGTG
TTGAAACTGTATAGACAGGGTTTAAGAACAGCTCGGAAAGCGCCTGTTGATGGTCGAGATGAATTGAGGCATATGATGAGAGAAGAAATGGAGAAGAACAGAAAGTGTAA
TGATAGACAGAAAATAAGATTTTTGTTGAGCGAAGGAATAGAGCGATTGAAGCGTCTAGATGAGATGTTGGATATGCAAGGCCATTAGATTAGATAGAGAGCAGAGAGCT
TTCTTTCTTTCTTTTACTCTGTATCATTTTGGAGTATTTAGAAAATTCCTTTTTGGATTCAGCCTTTTGAGTTATTATAATTTCGTACATTTTTTCTGATTCTCTTTCTC
AGTAATTATTTCTGATTACGTACCTTTTTGTATGACATTTAAGAGAGGGAA

Protein sequence

Show/hide protein sequence

MVFSHDLREFILRARVLKLYRQGLRTARKAPVDGRDELRHMMREEMEKNRKCNDRQKIRFLLSEGIERLKRLDEMLDMQGH

CSPI03G43670 (gene) of Cucumber (PI 183967) v1 genome