CuGenDBv2

Gene ID	CSPI03G44160
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Histone deacetylase-like protein
Genome location	Chr3:37848685..37849787
RNA-Seq Expression	CSPI03G44160
Synteny	CSPI03G44160
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0038795.1 uncharacterized protein E6C27_scaffold92G003500 [Cucumis melo var. makuwa]

1.8e-57

81.6

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Query:  MALRINCSSSSLLLLPQAPHSNSFHSTKSSKLSLKEDERSWRSRRSVCALGLASLIFAIEISDVFIASESLAVESPPQVLVDYYSRIRRMKKISRWSDKI
        MAL INCSSSS+ LLPQ PH NSF STK++KL LKED  SWRS RSVCALGLASLIFAIEI DVFIASESLA+ES PQ LVDYYSR RRMKKI RWSD+I
Subjt:  MALRINCSSSSLLLLPQAPHSNSFHSTKSSKLSLKEDERSWRSRRSVCALGLASLIFAIEISDVFIASESLAVESPPQVLVDYYSRIRRMKKISRWSDKI

Query:  RKCAPWRANSLEIIVPENLPRASQRRKWEGIAYNEFIDVKKNAPPGIQVSASEISSDNYCFSL
        RKCAPWRA SLEIIVPENLPR SQRRK E IAY EFID+KKNA PG+QV +SEISSD YCFSL
Subjt:  RKCAPWRANSLEIIVPENLPRASQRRKWEGIAYNEFIDVKKNAPPGIQVSASEISSDNYCFSL

XP_004136339.1 uncharacterized protein LOC101204764 [Cucumis sativus]

5.0e-84

100

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Query:  MALRINCSSSSLLLLPQAPHSNSFHSTKSSKLSLKEDERSWRSRRSVCALGLASLIFAIEISDVFIASESLAVESPPQVLVDYYSRIRRMKKISRWSDKI
        MALRINCSSSSLLLLPQAPHSNSFHSTKSSKLSLKEDERSWRSRRSVCALGLASLIFAIEISDVFIASESLAVESPPQVLVDYYSRIRRMKKISRWSDKI
Subjt:  MALRINCSSSSLLLLPQAPHSNSFHSTKSSKLSLKEDERSWRSRRSVCALGLASLIFAIEISDVFIASESLAVESPPQVLVDYYSRIRRMKKISRWSDKI

Query:  RKCAPWRANSLEIIVPENLPRASQRRKWEGIAYNEFIDVKKNAPPGIQVSASEISSDNYCFSL
        RKCAPWRANSLEIIVPENLPRASQRRKWEGIAYNEFIDVKKNAPPGIQVSASEISSDNYCFSL
Subjt:  RKCAPWRANSLEIIVPENLPRASQRRKWEGIAYNEFIDVKKNAPPGIQVSASEISSDNYCFSL

XP_022138217.1 uncharacterized protein LOC111009442 isoform X1 [Momordica charantia]

2.9e-39

63.41

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Query:  MALRINCSSSSLLLLPQAPHSNSFHSTKSSKLSLKEDERSWRSRRSVCALGLASLIFAIEISDVFIASESLAVES-PPQVLVDYYSRIRRMKKISRWSDK
        MALR+NC S+S+ LLP+AP SNSF ++K+++LSLKE E SWRSR   CALGLASLI AIE  + F+A E  A+ES PP  LVD      R  KISRWSDK
Subjt:  MALRINCSSSSLLLLPQAPHSNSFHSTKSSKLSLKEDERSWRSRRSVCALGLASLIFAIEISDVFIASESLAVES-PPQVLVDYYSRIRRMKKISRWSDK

Query:  IRKCAPWRANSLEIIVPENLPRASQRRKWEGIAYNEFIDVKKNAPPGIQVSASEISSDNYCFSL
         RKCAPWRANSLE IVPENLPR SQRRKWE + +   +DV+ NA P IQV +SE +S  YCFSL
Subjt:  IRKCAPWRANSLEIIVPENLPRASQRRKWEGIAYNEFIDVKKNAPPGIQVSASEISSDNYCFSL

XP_023524416.1 uncharacterized protein LOC111788320 [Cucurbita pepo subsp. pepo]

6.0e-37

63.19

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Query:  MALRINCSSSSLLLLPQAPHSNSFHSTKSSKLSLKEDERSWRSRRSVCALGLASLIFAIEISDVFIASESLAVESPPQVLVDYYSRIRRMKKISRWSDKI
        M L INC SSS++LLP+AP SNSF S+K ++LS K+D+ +WR  RS CALGLASLI AIE  DV +A E+ A+ESPPQV VD      R  KISRWSDK 
Subjt:  MALRINCSSSSLLLLPQAPHSNSFHSTKSSKLSLKEDERSWRSRRSVCALGLASLIFAIEISDVFIASESLAVESPPQVLVDYYSRIRRMKKISRWSDKI

Query:  RKCAPWRANSLEIIVPENLPRASQRRKWEGIAYNEFIDVKKNAPPGIQVSASEISSDNYCFSL
        RKCA WRANSLEIIVPENLPR SQRRKWE IA   F DV+    P +QV +S+  S  YCFSL
Subjt:  RKCAPWRANSLEIIVPENLPRASQRRKWEGIAYNEFIDVKKNAPPGIQVSASEISSDNYCFSL

XP_038899075.1 uncharacterized protein LOC120086473 [Benincasa hispida]

5.6e-51

74.23

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Query:  MALRINCSSSSLLLLPQAPHSNSFHSTKSSKLSLKEDERSWRSRRSVCALGLASLIFAIEISDVFIASESLAVESPPQVLVDYYSRIRRMKKISRWSDKI
        MALRI+CSSSS+ LLPQAP SNSF STK+++LS+KEDE SWRS RSVC LGLASLIFAIE+SD+F+ASESLA+ESPPQ LVDY    R+  KISRWSDK 
Subjt:  MALRINCSSSSLLLLPQAPHSNSFHSTKSSKLSLKEDERSWRSRRSVCALGLASLIFAIEISDVFIASESLAVESPPQVLVDYYSRIRRMKKISRWSDKI

Query:  RKCAPWRANSLEIIVPENLPRASQRRKWEGIAYNEFIDVKKNAPPGIQVSASEISSDNYCFSL
        RKCAPWRANSLE IVPENLPR S RRKWE IAY E +DVK    PGI+V +S+ SS NYCFSL
Subjt:  RKCAPWRANSLEIIVPENLPRASQRRKWEGIAYNEFIDVKKNAPPGIQVSASEISSDNYCFSL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LDQ8 Uncharacterized protein

2.4e-84

100

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Query:  MALRINCSSSSLLLLPQAPHSNSFHSTKSSKLSLKEDERSWRSRRSVCALGLASLIFAIEISDVFIASESLAVESPPQVLVDYYSRIRRMKKISRWSDKI
        MALRINCSSSSLLLLPQAPHSNSFHSTKSSKLSLKEDERSWRSRRSVCALGLASLIFAIEISDVFIASESLAVESPPQVLVDYYSRIRRMKKISRWSDKI
Subjt:  MALRINCSSSSLLLLPQAPHSNSFHSTKSSKLSLKEDERSWRSRRSVCALGLASLIFAIEISDVFIASESLAVESPPQVLVDYYSRIRRMKKISRWSDKI

Query:  RKCAPWRANSLEIIVPENLPRASQRRKWEGIAYNEFIDVKKNAPPGIQVSASEISSDNYCFSL
        RKCAPWRANSLEIIVPENLPRASQRRKWEGIAYNEFIDVKKNAPPGIQVSASEISSDNYCFSL
Subjt:  RKCAPWRANSLEIIVPENLPRASQRRKWEGIAYNEFIDVKKNAPPGIQVSASEISSDNYCFSL

A0A5A7TBN7 Uncharacterized protein

8.7e-58

81.6

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Query:  MALRINCSSSSLLLLPQAPHSNSFHSTKSSKLSLKEDERSWRSRRSVCALGLASLIFAIEISDVFIASESLAVESPPQVLVDYYSRIRRMKKISRWSDKI
        MAL INCSSSS+ LLPQ PH NSF STK++KL LKED  SWRS RSVCALGLASLIFAIEI DVFIASESLA+ES PQ LVDYYSR RRMKKI RWSD+I
Subjt:  MALRINCSSSSLLLLPQAPHSNSFHSTKSSKLSLKEDERSWRSRRSVCALGLASLIFAIEISDVFIASESLAVESPPQVLVDYYSRIRRMKKISRWSDKI

Query:  RKCAPWRANSLEIIVPENLPRASQRRKWEGIAYNEFIDVKKNAPPGIQVSASEISSDNYCFSL
        RKCAPWRA SLEIIVPENLPR SQRRK E IAY EFID+KKNA PG+QV +SEISSD YCFSL
Subjt:  RKCAPWRANSLEIIVPENLPRASQRRKWEGIAYNEFIDVKKNAPPGIQVSASEISSDNYCFSL

A0A6J1CAG3 uncharacterized protein LOC111009442 isoform X1

1.4e-39

63.41

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Query:  MALRINCSSSSLLLLPQAPHSNSFHSTKSSKLSLKEDERSWRSRRSVCALGLASLIFAIEISDVFIASESLAVES-PPQVLVDYYSRIRRMKKISRWSDK
        MALR+NC S+S+ LLP+AP SNSF ++K+++LSLKE E SWRSR   CALGLASLI AIE  + F+A E  A+ES PP  LVD      R  KISRWSDK
Subjt:  MALRINCSSSSLLLLPQAPHSNSFHSTKSSKLSLKEDERSWRSRRSVCALGLASLIFAIEISDVFIASESLAVES-PPQVLVDYYSRIRRMKKISRWSDK

Query:  IRKCAPWRANSLEIIVPENLPRASQRRKWEGIAYNEFIDVKKNAPPGIQVSASEISSDNYCFSL
         RKCAPWRANSLE IVPENLPR SQRRKWE + +   +DV+ NA P IQV +SE +S  YCFSL
Subjt:  IRKCAPWRANSLEIIVPENLPRASQRRKWEGIAYNEFIDVKKNAPPGIQVSASEISSDNYCFSL

A0A6J1CAH3 uncharacterized protein LOC111009442 isoform X2

1.2e-35

64.14

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Query:  MALRINCSSSSLLLLPQAPHSNSFHSTKSSKLSLKEDERSWRSRRSVCALGLASLIFAIEISDVFIASESLAVES-PPQVLVDYYSRIRRMKKISRWSDK
        MALR+NC S+S+ LLP+AP SNSF ++K+++LSLKE E SWRSR   CALGLASLI AIE  + F+A E  A+ES PP  LVD      R  KISRWSDK
Subjt:  MALRINCSSSSLLLLPQAPHSNSFHSTKSSKLSLKEDERSWRSRRSVCALGLASLIFAIEISDVFIASESLAVES-PPQVLVDYYSRIRRMKKISRWSDK

Query:  IRKCAPWRANSLEIIVPENLPRASQRRKWEGIAYNEFIDVKKNAP
         RKCAPWRANSLE IVPENLPR SQRRKWE + +   +DV+ NAP
Subjt:  IRKCAPWRANSLEIIVPENLPRASQRRKWEGIAYNEFIDVKKNAP

A0A6J1J2V8 uncharacterized protein LOC111480783

2.0e-33

65.97

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Query:  MALRINCSSSSLLLLPQAPHSNSFHSTKSSKLSLKEDERSWRSRRSVCALGLASLIFAIEISDVFIASESLAVESPPQVLVDYYSRIRRMKKISRWSDKI
        M L INC SSS++LLP+AP SNSF S+K ++LS K+D  +WR  RS CALGLASLI AIE  D+ +A E+ A+ESPPQV VD      R  KISRWSDK 
Subjt:  MALRINCSSSSLLLLPQAPHSNSFHSTKSSKLSLKEDERSWRSRRSVCALGLASLIFAIEISDVFIASESLAVESPPQVLVDYYSRIRRMKKISRWSDKI

Query:  RKCAPWRANSLEIIVPENLPRASQRRKWEGIAYNEFIDVKKNAP
        RKCA WRANSLEIIVPENLPR SQRRKWE IA   F DV +NAP
Subjt:  RKCAPWRANSLEIIVPENLPRASQRRKWEGIAYNEFIDVKKNAP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G25625.1 unknown protein

6.7e-10

35.5

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Query:  MALRINCSSSSLLLLPQAPHSNSFHSTKSSKLSLKEDERSWRSRRSVCA--LGLAS--LIFAIEISDVFIASESLAVESPPQVLVDYYSRIRRMKKISRW
        MA RI+C  +   L   +  S +     +SK+S +  E     R++ C+  LG+A+  +I  I+I+DV  + E+  V+SP + +       R      RW
Subjt:  MALRINCSSSSLLLLPQAPHSNSFHSTKSSKLSLKEDERSWRSRRSVCA--LGLAS--LIFAIEISDVFIASESLAVESPPQVLVDYYSRIRRMKKISRW

Query:  SDKIRKCAPWRANSLEIIVPENLPRASQRRKWE--GIAYNEFIDVKKNAPPGIQVSASEISSDNYCFSL
        SDK R C PW  NSLE IVPENLPR S  R+ E  G+A       K +APP + V  + ++    CFS+
Subjt:  SDKIRKCAPWRANSLEIIVPENLPRASQRRKWE--GIAYNEFIDVKKNAPPGIQVSASEISSDNYCFSL

AT2G25625.2 unknown protein

7.4e-09

35.71

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Query:  MALRINCSSSSLLLLPQAPHSNSFHSTKSSKLSLK-EDERSWRSRRSVCALGLAS--LIFAIEISDVFIASESLAVESPPQVLVDYYSRIRRMKKISRWS
        MA RI+C  +   L   +  S +     +SK+S + E+E   R  +    LG+A+  +I  I+I+DV  + E+  V+SP + +       R      RWS
Subjt:  MALRINCSSSSLLLLPQAPHSNSFHSTKSSKLSLK-EDERSWRSRRSVCALGLAS--LIFAIEISDVFIASESLAVESPPQVLVDYYSRIRRMKKISRWS

Query:  DKIRKCAPWRANSLEIIVPENLPRASQRRKWE--GIAYNEFIDVKKNAPPGIQVSASEISSDNYCFSL
        DK R C PW  NSLE IVPENLPR S  R+ E  G+A       K +APP + V  + ++    CFS+
Subjt:  DKIRKCAPWRANSLEIIVPENLPRASQRRKWE--GIAYNEFIDVKKNAPPGIQVSASEISSDNYCFSL

Sequences

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CDS sequence

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ATGGCTTTAAGAATCAACTGCTCATCTTCTTCACTTCTTCTCCTTCCTCAAGCTCCCCATTCCAATTCCTTCCACTCTACAAAATCGTCTAAATTATCTCTGAAAGAAGA
TGAACGATCATGGAGAAGTCGTCGAAGCGTATGCGCTTTAGGTTTAGCGAGTTTGATTTTCGCAATCGAAATCAGCGACGTCTTCATTGCTAGTGAATCTCTTGCTGTGG
AATCGCCGCCGCAAGTACTTGTGGATTATTACTCACGGATCAGGCGTATGAAGAAGATATCGAGATGGAGCGATAAGATCAGAAAATGCGCTCCATGGCGAGCGAATTCG
TTGGAGATCATTGTGCCGGAGAACCTCCCGAGGGCGTCACAGCGTCGGAAGTGGGAAGGAATTGCATATAATGAATTCATAGATGTGAAGAAGAACGCTCCTCCGGGAAT
TCAAGTAAGTGCTTCTGAAATTAGCTCTGATAATTACTGTTTCTCTTTGTAA

mRNA sequence

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TCCGTCCACCGTCACGTTAACTTTAACGTCTCCCCTAACGGCCATCCCTATATTATATACATAATACAATACAACAAATCATCCCTTCGGCTTTCTCCACTTGTTTTGTG
TATCAAATTAAAAAACAGAGGCAATGGCTTTAAGAATCAACTGCTCATCTTCTTCACTTCTTCTCCTTCCTCAAGCTCCCCATTCCAATTCCTTCCACTCTACAAAATCG
TCTAAATTATCTCTGAAAGAAGATGAACGATCATGGAGAAGTCGTCGAAGCGTATGCGCTTTAGGTTTAGCGAGTTTGATTTTCGCAATCGAAATCAGCGACGTCTTCAT
TGCTAGTGAATCTCTTGCTGTGGAATCGCCGCCGCAAGTACTTGTGGATTATTACTCACGGATCAGGCGTATGAAGAAGATATCGAGATGGAGCGATAAGATCAGAAAAT
GCGCTCCATGGCGAGCGAATTCGTTGGAGATCATTGTGCCGGAGAACCTCCCGAGGGCGTCACAGCGTCGGAAGTGGGAAGGAATTGCATATAATGAATTCATAGATGTG
AAGAAGAACGCTCCTCCGGGAATTCAAGTAAGTGCTTCTGAAATTAGCTCTGATAATTACTGTTTCTCTTTGTAAAATTTGTATGGATTTTACTTAGAAAGTCGTTTGAT
CAATCAATCACATGACTGGGTATATTGTTAATATTGCTTGTTTCGGTTGTTGTATCGATGAAATCCAAGTACAGATCGGCGTTGTTGTAGTACATGATGCAGTACGTTAC
ATATTAATTAATTAAACTTCAAACCAATTCCGCTTTGCCATAAACGGCCCAATAATGTATTATTGGGCCGCTTTTCTCCACTATAGTGGCCCAATTATGGAAGTTAATAG
CGTTGGTATGAAAATACTTATAAATTGGAAGGAGTGCTCCACTCTTTACTTATAAATTCTTCAATTCAGTACGGGCAGATGGAAGGTAAGTCCTTGCTCGTCCGG

Protein sequence

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MALRINCSSSSLLLLPQAPHSNSFHSTKSSKLSLKEDERSWRSRRSVCALGLASLIFAIEISDVFIASESLAVESPPQVLVDYYSRIRRMKKISRWSDKIRKCAPWRANS
LEIIVPENLPRASQRRKWEGIAYNEFIDVKKNAPPGIQVSASEISSDNYCFSL

CSPI03G44160 (gene) of Cucumber (PI 183967) v1 genome