; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G44250 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G44250
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr3:37916135..37917481
RNA-Seq ExpressionCSPI03G44250
SyntenyCSPI03G44250
Gene Ontology termsGO:0006796 - phosphate-containing compound metabolic process (biological process)
GO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0005622 - intracellular (cellular component)
GO:0016020 - membrane (cellular component)
GO:0016772 - transferase activity, transferring phosphorus-containing groups (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBN69274.1 TatD related DNase [Prunus dulcis]3.9e-7136.85Show/hide
Query:  GCLKNPKFSVFINGKPRGQMTASRGICQGDPLSPFLFLLVSEVLGEMINKLHSNSQFEGFLVGKDLI---HL---------------HCFNLPMILFSF-
        GCL++  FS+ INGKPRG+  ASRG+ QGDPLSPFLF LVS+VL  +I +    +   G + G D +   HL               +  NL  +L  F 
Subjt:  GCLKNPKFSVFINGKPRGQMTASRGICQGDPLSPFLFLLVSEVLGEMINKLHSNSQFEGFLVGKDLI---HL---------------HCFNLPMILFSF-

Query:  -----KVNWEKSALSGVNVGEEDLFQTANLLGCKAEKLPIIYLGLPLGGYPRQKMSWQPIMDRIHKKLDRWKRYNISRGGRHTLCNLVLVSLPTYYPSLF
             K+N  KS + G+N   E L   A   GC+    P++YLGLPLGG PR    W P++D++ K+L RWKR  +S+GGR TL   VL S+P+YY SLF
Subjt:  -----KVNWEKSALSGVNVGEEDLFQTANLLGCKAEKLPIIYLGLPLGGYPRQKMSWQPIMDRIHKKLDRWKRYNISRGGRHTLCNLVLVSLPTYYPSLF

Query:  SIPENVAASLERINRNFFWEG-HAG-----------FSSSKRWGLGLGGIKNHNTALLTKWGWRFSKEESALWRQIIRSIHGKEPFDWFTKGKSGNSLRS
         +P  V A +E++ RNF WEG   G             S +  GLG+G ++  N AL  KW WRF  E ++LW +II+S +G +   W TK     S R+
Subjt:  SIPENVAASLERINRNFFWEG-HAG-----------FSSSKRWGLGLGGIKNHNTALLTKWGWRFSKEESALWRQIIRSIHGKEPFDWFTKGKSGNSLRS

Query:  PCVSTARVWRSVDSLASFNLGNGQRIGFWTDLW-----------------------------DHDTSF-WSLAFRRSLKDDEIVDFRSLLSLLSSERVAN
        P    ++ + S      F++GNG++I FW D W                             +H+    W   FRR+L + EI +   LL +L + R+  
Subjt:  PCVSTARVWRSVDSLASFNLGNGQRIGFWTDLW-----------------------------DHDTSF-WSLAFRRSLKDDEIVDFRSLLSLLSSERVAN

Query:  SK-DYRSWSIDPQGRFFVKSLSAHLKSTSPMDKCVSAAIWKTGSP
        S+ D RSW I+ QG F  KS  + L ST+ +      +IWK  +P
Subjt:  SK-DYRSWSIDPQGRFFVKSLSAHLKSTSPMDKCVSAAIWKTGSP

KAA0031516.1 Transposon TX1 uncharacterized [Cucumis melo var. makuwa]5.1e-7152.23Show/hide
Query:  MGCLKNPKFSVFINGKPRGQMTASRGICQGDPLSPFLFLLVSEVLGEMINKLHSNSQFEGFLVGKDLIH-----------LHCFNLPMILFSF-------
        M CL NP FS+FINGK RG++TASRGICQGDPLSPFLFLLVS+VL  + NKLH + Q+E FLVGKDLIH           L C     IL  F       
Subjt:  MGCLKNPKFSVFINGKPRGQMTASRGICQGDPLSPFLFLLVSEVLGEMINKLHSNSQFEGFLVGKDLIH-----------LHCFNLPMILFSF-------

Query:  ------KVNWEKSALSGVNVGEEDLFQTANLLGCKAEKLPIIYLGLPLGGYPRQKMSWQPIMDRIHKKLDRWKRYNISRGGRHTLCNLVLVSLPTYYPSL
              KVNWEK ALSGVN      F+   +L  + +  P                            L RWKR+NISRGGR TLCN VL S PTYY S 
Subjt:  ------KVNWEKSALSGVNVGEEDLFQTANLLGCKAEKLPIIYLGLPLGGYPRQKMSWQPIMDRIHKKLDRWKRYNISRGGRHTLCNLVLVSLPTYYPSL

Query:  FSIPENVAASLERINRNFFWEGHAGFS------------SSKRWGLGLGGIKNHNTALLTKWGWRFSKEESALWRQIIRSIHGKEPFDWFT
        FSIP+NVA SLE+I RNFFWEG++G               SK  GL LGG+K HN ALLTKWGWRF+ E+SA WR+II SIH KEPF WFT
Subjt:  FSIPENVAASLERINRNFFWEGHAGFS------------SSKRWGLGLGGIKNHNTALLTKWGWRFSKEESALWRQIIRSIHGKEPFDWFT

RVX23556.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]1.0e-7138.04Show/hide
Query:  GCLKNPKFSVFINGKPRGQMTASRGICQGDPLSPFLFLLVSEVLGEMINKLHSNSQFEGFLVGKD---LIHLHCFN---------------LPMILFSF-
        GCL +  ++V +NG  +G + ASRG+ QGDPLSPFLF LV++VL  M+ +    +  EGF VG++   + HL   +               L  +L +F 
Subjt:  GCLKNPKFSVFINGKPRGQMTASRGICQGDPLSPFLFLLVSEVLGEMINKLHSNSQFEGFLVGKD---LIHLHCFN---------------LPMILFSF-

Query:  -----KVNWEKSALSGVNVGEEDLFQTANLLGCKAEKLPIIYLGLPLGGYPRQKMSWQPIMDRIHKKLDRWKRYNISRGGRHTLCNLVLVSLPTYYPSLF
             KVN +KS + G+N+    + + A  LGCKA   PI+YLGLPLGG PR    W P+++RI ++LD W++  +S GGR TL +  L  +P YY SLF
Subjt:  -----KVNWEKSALSGVNVGEEDLFQTANLLGCKAEKLPIIYLGLPLGGYPRQKMSWQPIMDRIHKKLDRWKRYNISRGGRHTLCNLVLVSLPTYYPSLF

Query:  SIPENVAASLERINRNFFWEG------------HAGFSSSKRWGLGLGGIKNHNTALLTKWGWRFSKEESALWRQIIRSIHGKEPFDWFTKGKSGNSLRS
         +P +VAA +ER+ R+F W G                +  +R GLG G I   N ALL KW WR+ +E SALW Q+I SI+G     W        S R 
Subjt:  SIPENVAASLERINRNFFWEG------------HAGFSSSKRWGLGLGGIKNHNTALLTKWGWRFSKEESALWRQIIRSIHGKEPFDWFTKGKSGNSLRS

Query:  PCVSTARVWRSVDSLASFNLGNGQRIGFWTDL--WDHDTSFWSLAFRRSLKDDEIVDFRSLLSLLSSERVANS-KDYRSWSIDPQGRFFVKSLSAHLKS-
        P  + ++V++   S   F +GNG+RI FW DL  W +    W+L FRR+L D EI D   L+  L    ++ S  D RSW +   G F VKS    L   
Subjt:  PCVSTARVWRSVDSLASFNLGNGQRIGFWTDL--WDHDTSFWSLAFRRSLKDDEIVDFRSLLSLLSSERVANS-KDYRSWSIDPQGRFFVKSLSAHLKS-

Query:  TSPMDKCVSAAIWKTGSP
          P     S  +W +  P
Subjt:  TSPMDKCVSAAIWKTGSP

TYJ97221.1 putative LRR receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa]3.4e-8357.86Show/hide
Query:  KVNWEKSALSGVNVGEEDLFQTANLLGCKAEKLPIIYLGLPLGGYPRQKMSWQPIMDRIHKKLDRWKRYNISRGGRHTLCNLVLVSLPTYYPSLFSIPEN
        KVNWEKSALSGV++ E+ L QTA+ + CKAE LPI+YL LPLGGYP+ +  WQP++DRIHKKLDRWK +NI RGGR  LCN VL SL TYY S     + 
Subjt:  KVNWEKSALSGVNVGEEDLFQTANLLGCKAEKLPIIYLGLPLGGYPRQKMSWQPIMDRIHKKLDRWKRYNISRGGRHTLCNLVLVSLPTYYPSLFSIPEN

Query:  VAASLERINRNFFWEGHAGFS------------SSKRWGLGLGGIKNHNTALLTKWGWRFSKEESALWRQIIRSIHGKEPFDWFTKGKSGNSLRSPCVST
          + LE+I RNFFWEG +G              S K  GLGLG +K HN+ALL KWGWRF+ E+ +  R+II SIHGKEPFDWFT  K GNSLRSP  S 
Subjt:  VAASLERINRNFFWEGHAGFS------------SSKRWGLGLGGIKNHNTALLTKWGWRFSKEESALWRQIIRSIHGKEPFDWFTKGKSGNSLRSPCVST

Query:  ARVWRSVDSLASFNLGNGQRI--GFWTDLWDHDTSFWSLAFRRSLKDDEIVDFRSLLSLLSSERVANSKDYRSWSIDPQG
        ++VWRSV+SLA   LG    +  G   D WD  T  WSL FRRSLKD EIV+F S LSLL  E+V + +D++ WSIDP G
Subjt:  ARVWRSVDSLASFNLGNGQRI--GFWTDLWDHDTSFWSLAFRRSLKDDEIVDFRSLLSLLSSERVANSKDYRSWSIDPQG

XP_038880332.1 uncharacterized protein LOC120071973 [Benincasa hispida]1.2e-8847.32Show/hide
Query:  GCLKNPKFSVFINGKPRGQMTASRGICQGDPLSPFLFLLVSEVLGEMINKLHSNSQFEGFLVGKDLIHLHCFNL--PMILF-------------------
        GC+ NPKFS+FI+G+PRG++  +RGI QGDP SPFLFLLVSEVL  +I +LH   ++EGFLVGKD +H+         +LF                   
Subjt:  GCLKNPKFSVFINGKPRGQMTASRGICQGDPLSPFLFLLVSEVLGEMINKLHSNSQFEGFLVGKDLIHLHCFNL--PMILF-------------------

Query:  --SFKVNWEKSALSGVNVGEEDLFQTANLLGCKAEKLPIIYLGLPLGGYPRQKMSWQPIMDRIHKKLDRWKRYNISRGGRHTLCNLVLVSLPTYYPSLFS
          S KVNWEKSA+ G+N+ E  +   A  L CK + LP++YLGLPLGGYP+    WQP++D++  KLD+W+R+N+SRGG+ TLC  V  +LPTYY SLF 
Subjt:  --SFKVNWEKSALSGVNVGEEDLFQTANLLGCKAEKLPIIYLGLPLGGYPRQKMSWQPIMDRIHKKLDRWKRYNISRGGRHTLCNLVLVSLPTYYPSLFS

Query:  IPENVAASLERINRNFFWEGHAG--FSSSKRW----------GLGLGGIKNHNTALLTKWGWRFSKEESALWRQIIRSIHGKEPFDWFTKGKSGNSLRSP
        +PE V   +ER  +NFFWEGH G   +   +W          GLGLGG++  N A L KWGWR    E+ LW ++++SIH ++ FDW T GK   +LRS 
Subjt:  IPENVAASLERINRNFFWEGHAG--FSSSKRW----------GLGLGGIKNHNTALLTKWGWRFSKEESALWRQIIRSIHGKEPFDWFTKGKSGNSLRSP

Query:  CVSTARVWRSVDSLASFNLGNGQRIGFWTDLWDHDT
         +S +R W  V++LA + LGNG RI F +D W  +T
Subjt:  CVSTARVWRSVDSLASFNLGNGQRIGFWTDLWDHDT

TrEMBL top hitse value%identityAlignment
A0A438KQT0 Transposon TX1 uncharacterized 149 kDa protein5.0e-7238.04Show/hide
Query:  GCLKNPKFSVFINGKPRGQMTASRGICQGDPLSPFLFLLVSEVLGEMINKLHSNSQFEGFLVGKD---LIHLHCFN---------------LPMILFSF-
        GCL +  ++V +NG  +G + ASRG+ QGDPLSPFLF LV++VL  M+ +    +  EGF VG++   + HL   +               L  +L +F 
Subjt:  GCLKNPKFSVFINGKPRGQMTASRGICQGDPLSPFLFLLVSEVLGEMINKLHSNSQFEGFLVGKD---LIHLHCFN---------------LPMILFSF-

Query:  -----KVNWEKSALSGVNVGEEDLFQTANLLGCKAEKLPIIYLGLPLGGYPRQKMSWQPIMDRIHKKLDRWKRYNISRGGRHTLCNLVLVSLPTYYPSLF
             KVN +KS + G+N+    + + A  LGCKA   PI+YLGLPLGG PR    W P+++RI ++LD W++  +S GGR TL +  L  +P YY SLF
Subjt:  -----KVNWEKSALSGVNVGEEDLFQTANLLGCKAEKLPIIYLGLPLGGYPRQKMSWQPIMDRIHKKLDRWKRYNISRGGRHTLCNLVLVSLPTYYPSLF

Query:  SIPENVAASLERINRNFFWEG------------HAGFSSSKRWGLGLGGIKNHNTALLTKWGWRFSKEESALWRQIIRSIHGKEPFDWFTKGKSGNSLRS
         +P +VAA +ER+ R+F W G                +  +R GLG G I   N ALL KW WR+ +E SALW Q+I SI+G     W        S R 
Subjt:  SIPENVAASLERINRNFFWEG------------HAGFSSSKRWGLGLGGIKNHNTALLTKWGWRFSKEESALWRQIIRSIHGKEPFDWFTKGKSGNSLRS

Query:  PCVSTARVWRSVDSLASFNLGNGQRIGFWTDL--WDHDTSFWSLAFRRSLKDDEIVDFRSLLSLLSSERVANS-KDYRSWSIDPQGRFFVKSLSAHLKS-
        P  + ++V++   S   F +GNG+RI FW DL  W +    W+L FRR+L D EI D   L+  L    ++ S  D RSW +   G F VKS    L   
Subjt:  PCVSTARVWRSVDSLASFNLGNGQRIGFWTDL--WDHDTSFWSLAFRRSLKDDEIVDFRSLLSLLSSERVANS-KDYRSWSIDPQGRFFVKSLSAHLKS-

Query:  TSPMDKCVSAAIWKTGSP
          P     S  +W +  P
Subjt:  TSPMDKCVSAAIWKTGSP

A0A5D3BF26 Putative LRR receptor-like serine/threonine-protein kinase1.6e-8357.86Show/hide
Query:  KVNWEKSALSGVNVGEEDLFQTANLLGCKAEKLPIIYLGLPLGGYPRQKMSWQPIMDRIHKKLDRWKRYNISRGGRHTLCNLVLVSLPTYYPSLFSIPEN
        KVNWEKSALSGV++ E+ L QTA+ + CKAE LPI+YL LPLGGYP+ +  WQP++DRIHKKLDRWK +NI RGGR  LCN VL SL TYY S     + 
Subjt:  KVNWEKSALSGVNVGEEDLFQTANLLGCKAEKLPIIYLGLPLGGYPRQKMSWQPIMDRIHKKLDRWKRYNISRGGRHTLCNLVLVSLPTYYPSLFSIPEN

Query:  VAASLERINRNFFWEGHAGFS------------SSKRWGLGLGGIKNHNTALLTKWGWRFSKEESALWRQIIRSIHGKEPFDWFTKGKSGNSLRSPCVST
          + LE+I RNFFWEG +G              S K  GLGLG +K HN+ALL KWGWRF+ E+ +  R+II SIHGKEPFDWFT  K GNSLRSP  S 
Subjt:  VAASLERINRNFFWEGHAGFS------------SSKRWGLGLGGIKNHNTALLTKWGWRFSKEESALWRQIIRSIHGKEPFDWFTKGKSGNSLRSPCVST

Query:  ARVWRSVDSLASFNLGNGQRI--GFWTDLWDHDTSFWSLAFRRSLKDDEIVDFRSLLSLLSSERVANSKDYRSWSIDPQG
        ++VWRSV+SLA   LG    +  G   D WD  T  WSL FRRSLKD EIV+F S LSLL  E+V + +D++ WSIDP G
Subjt:  ARVWRSVDSLASFNLGNGQRI--GFWTDLWDHDTSFWSLAFRRSLKDDEIVDFRSLLSLLSSERVANSKDYRSWSIDPQG

A0A5H2XQW2 TatD related DNase1.9e-7136.85Show/hide
Query:  GCLKNPKFSVFINGKPRGQMTASRGICQGDPLSPFLFLLVSEVLGEMINKLHSNSQFEGFLVGKDLI---HL---------------HCFNLPMILFSF-
        GCL++  FS+ INGKPRG+  ASRG+ QGDPLSPFLF LVS+VL  +I +    +   G + G D +   HL               +  NL  +L  F 
Subjt:  GCLKNPKFSVFINGKPRGQMTASRGICQGDPLSPFLFLLVSEVLGEMINKLHSNSQFEGFLVGKDLI---HL---------------HCFNLPMILFSF-

Query:  -----KVNWEKSALSGVNVGEEDLFQTANLLGCKAEKLPIIYLGLPLGGYPRQKMSWQPIMDRIHKKLDRWKRYNISRGGRHTLCNLVLVSLPTYYPSLF
             K+N  KS + G+N   E L   A   GC+    P++YLGLPLGG PR    W P++D++ K+L RWKR  +S+GGR TL   VL S+P+YY SLF
Subjt:  -----KVNWEKSALSGVNVGEEDLFQTANLLGCKAEKLPIIYLGLPLGGYPRQKMSWQPIMDRIHKKLDRWKRYNISRGGRHTLCNLVLVSLPTYYPSLF

Query:  SIPENVAASLERINRNFFWEG-HAG-----------FSSSKRWGLGLGGIKNHNTALLTKWGWRFSKEESALWRQIIRSIHGKEPFDWFTKGKSGNSLRS
         +P  V A +E++ RNF WEG   G             S +  GLG+G ++  N AL  KW WRF  E ++LW +II+S +G +   W TK     S R+
Subjt:  SIPENVAASLERINRNFFWEG-HAG-----------FSSSKRWGLGLGGIKNHNTALLTKWGWRFSKEESALWRQIIRSIHGKEPFDWFTKGKSGNSLRS

Query:  PCVSTARVWRSVDSLASFNLGNGQRIGFWTDLW-----------------------------DHDTSF-WSLAFRRSLKDDEIVDFRSLLSLLSSERVAN
        P    ++ + S      F++GNG++I FW D W                             +H+    W   FRR+L + EI +   LL +L + R+  
Subjt:  PCVSTARVWRSVDSLASFNLGNGQRIGFWTDLW-----------------------------DHDTSF-WSLAFRRSLKDDEIVDFRSLLSLLSSERVAN

Query:  SK-DYRSWSIDPQGRFFVKSLSAHLKSTSPMDKCVSAAIWKTGSP
        S+ D RSW I+ QG F  KS  + L ST+ +      +IWK  +P
Subjt:  SK-DYRSWSIDPQGRFFVKSLSAHLKSTSPMDKCVSAAIWKTGSP

M5VS59 Reverse transcriptase domain-containing protein (Fragment)3.8e-7236.77Show/hide
Query:  MGCLKNPKFSVFINGKPRGQMTASRGICQGDPLSPFLFLLVSEVLGEMINKLHSNSQFEGFLVGKDLI---HL---------------HCFNLPMILFSF
        +GCL++  FS+ INGKPRG+  ASRG+ QGDPLSPFLF LVS+VL  +I +    +   G + G D +   HL               +  NL  +L  F
Subjt:  MGCLKNPKFSVFINGKPRGQMTASRGICQGDPLSPFLFLLVSEVLGEMINKLHSNSQFEGFLVGKDLI---HL---------------HCFNLPMILFSF

Query:  ------KVNWEKSALSGVNVGEEDLFQTANLLGCKAEKLPIIYLGLPLGGYPRQKMSWQPIMDRIHKKLDRWKRYNISRGGRHTLCNLVLVSLPTYYPSL
              K+N  KS + G+N   E L   A   GC+    P++YLGLPLGG PR    W P+MD++ K+L +WKR  +S+GGR TL   VL S+P+YY SL
Subjt:  ------KVNWEKSALSGVNVGEEDLFQTANLLGCKAEKLPIIYLGLPLGGYPRQKMSWQPIMDRIHKKLDRWKRYNISRGGRHTLCNLVLVSLPTYYPSL

Query:  FSIPENVAASLERINRNFFWEG------------HAGFSSSKRWGLGLGGIKNHNTALLTKWGWRFSKEESALWRQIIRSIHGKEPFDWFTKGKSGNSLR
        F +P  VAA +E++ RNF WEG                 S +  GLG+G ++  N AL  KW WRF  E ++LW +II+S +G +   W TK     S R
Subjt:  FSIPENVAASLERINRNFFWEG------------HAGFSSSKRWGLGLGGIKNHNTALLTKWGWRFSKEESALWRQIIRSIHGKEPFDWFTKGKSGNSLR

Query:  SPCVSTARVWRSVDSLASFNLGNGQRIGFWTDLW-----------------------------DHDTSF-WSLAFRRSLKDDEIVDFRSLLSLLSSERVA
        +P    ++ + S      F++GNG++I FW DLW                             +H     W   FRR+L + EI +   LL +L + R+ 
Subjt:  SPCVSTARVWRSVDSLASFNLGNGQRIGFWTDLW-----------------------------DHDTSF-WSLAFRRSLKDDEIVDFRSLLSLLSSERVA

Query:  NSK-DYRSWSIDPQGRFFVKSLSAHLKSTSPMDKCVSAAIWKTGSP
         S+ D RSW ++ QG F  KS  + L ST+       ++IWK  +P
Subjt:  NSK-DYRSWSIDPQGRFFVKSLSAHLKSTSPMDKCVSAAIWKTGSP

M5X4S0 Reverse transcriptase domain-containing protein (Fragment)1.1e-7136.55Show/hide
Query:  MGCLKNPKFSVFINGKPRGQMTASRGICQGDPLSPFLFLLVSEVLGEMINKLHSNSQFEGFLVGKDLI---HL---------------HCFNLPMILFSF
        +GCL++  FS+ INGKPRG+  ASRG+ QGDPLSPFLF LVS+VL  +I +    +   G + G D +   HL               +  NL  +L  F
Subjt:  MGCLKNPKFSVFINGKPRGQMTASRGICQGDPLSPFLFLLVSEVLGEMINKLHSNSQFEGFLVGKDLI---HL---------------HCFNLPMILFSF

Query:  ------KVNWEKSALSGVNVGEEDLFQTANLLGCKAEKLPIIYLGLPLGGYPRQKMSWQPIMDRIHKKLDRWKRYNISRGGRHTLCNLVLVSLPTYYPSL
              K+N  KS + G+N   E L   A   GC+    P++YLGLPLGG PR    W P+M+++ K+L +WKR  +S+GGR TL   VL S+P+YY SL
Subjt:  ------KVNWEKSALSGVNVGEEDLFQTANLLGCKAEKLPIIYLGLPLGGYPRQKMSWQPIMDRIHKKLDRWKRYNISRGGRHTLCNLVLVSLPTYYPSL

Query:  FSIPENVAASLERINRNFFWEG------------HAGFSSSKRWGLGLGGIKNHNTALLTKWGWRFSKEESALWRQIIRSIHGKEPFDWFTKGKSGNSLR
        F +P  VAA +E++ RNF WEG                 S +  GLG+G ++  N AL  KW WRF  E ++LW +II+S +G +   W TK     S R
Subjt:  FSIPENVAASLERINRNFFWEG------------HAGFSSSKRWGLGLGGIKNHNTALLTKWGWRFSKEESALWRQIIRSIHGKEPFDWFTKGKSGNSLR

Query:  SPCVSTARVWRSVDSLASFNLGNGQRIGFWTDLW-----------------------------DHDTSF-WSLAFRRSLKDDEIVDFRSLLSLLSSERVA
        +P    ++ + S      F++GNG++I FW DLW                             +H     W   FRR+L + EI +   LL +L + R+ 
Subjt:  SPCVSTARVWRSVDSLASFNLGNGQRIGFWTDLW-----------------------------DHDTSF-WSLAFRRSLKDDEIVDFRSLLSLLSSERVA

Query:  NSK-DYRSWSIDPQGRFFVKSLSAHLKSTSPMDKCVSAAIWKTGSP
         S+ D RSW ++ QG F  KS  + L ST+       ++IWK  +P
Subjt:  NSK-DYRSWSIDPQGRFFVKSLSAHLKSTSPMDKCVSAAIWKTGSP

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein1.5e-0923.92Show/hide
Query:  PKFSVFINGKPRGQMTASRGICQGDPLSPFLFLLVSEVLGEMINKLHSNSQFEGFLVGKDLIHLHCFNLPMILF----------------------SFKV
        P  ++ +NG+         G  QG PLSP LF +V EVL   I +     + +G  +GK+ + L  F   MI++                       +K+
Subjt:  PKFSVFINGKPRGQMTASRGICQGDPLSPFLFLLVSEVLGEMINKLHSNSQFEGFLVGKDLIHLHCFNLPMILF----------------------SFKV

Query:  NWEKSALSGVNVGEEDLFQTANLLGCKAEKLPIIYLGLPLGGYPRQ--KMSWQPIMDRIHKKLDRWKRYNISRGGRHTLCNLVLVSLPTYYPSLFSI--P
        N +KS     N   +   Q    L        I YLG+ L    +   K +++P++  I +  ++WK    S  GR  +  + ++    Y  +   I  P
Subjt:  NWEKSALSGVNVGEEDLFQTANLLGCKAEKLPIIYLGLPLGGYPRQ--KMSWQPIMDRIHKKLDRWKRYNISRGGRHTLCNLVLVSLPTYYPSLFSI--P

Query:  ENVAASLERINRNFFW-EGHAGFSSS------KRWGLGLGGIKNHNTALLTKWGW
              LE+    F W +  A  + S      K  G+ L   K +  A +TK  W
Subjt:  ENVAASLERINRNFFW-EGHAGFSSS------KRWGLGLGGIKNHNTALLTKWGW

P08548 LINE-1 reverse transcriptase homolog4.6e-0623.05Show/hide
Query:  PKFSVFINGKPRGQMTASRGICQGDPLSPFLFLLVSEVLGEMINKLHSNSQFEGFLVGKDLIHLHCFNLPMILF----------SFKVNWEKSALSGVNV
        P  ++ +NG          G  QG PLSP LF +V EVL   I +       +G  +G + I L  F   MI++            +V  E S +SG  +
Subjt:  PKFSVFINGKPRGQMTASRGICQGDPLSPFLFLLVSEVLGEMINKLHSNSQFEGFLVGKDLIHLHCFNLPMILF----------SFKVNWEKSALSGVNV

Query:  GEED---LFQTANLLGCKAEKLPIIYLGLP-----LGGYPRQ------KMSWQPIMDRIHKKLDRWKRYNISRGGRHTLCNLVLVSLPTYYPSLFSI--P
                  T N    K  K  I +  +P     LG Y  +      K +++ +   I + +++WK    S  GR  +  + ++    Y  +   I  P
Subjt:  GEED---LFQTANLLGCKAEKLPIIYLGLP-----LGGYPRQ------KMSWQPIMDRIHKKLDRWKRYNISRGGRHTLCNLVLVSLPTYYPSLFSI--P

Query:  ENVAASLERINRNFFWEGHAG-------FSSSKRWGLGLGGIKNHNTALLTKWGWRFSK-EESALWRQI
         +    LE+I  +F W             + +K  G+ L  ++ +  +++ K  W + K  E  +W +I
Subjt:  ENVAASLERINRNFFWEGHAG-------FSSSKRWGLGLGGIKNHNTALLTKWGWRFSK-EESALWRQI

P0C2F6 Putative ribonuclease H protein At1g657503.7e-1629.89Show/hide
Query:  KMSWQPIMDRIHKKLDRWKRYNISRGGRHTLCNLVLVSLPTYYPSLFSIPENVAASLERINRNFFWEGHAG------------FSSSKRWGLGLGGIKNH
        K ++  I++R+  ++  W+   +S  GR TL   VL S+P +  S   +P+++   L++++R F W   A              S  K  GLG+   K+ 
Subjt:  KMSWQPIMDRIHKKLDRWKRYNISRGGRHTLCNLVLVSLPTYYPSLFSIPENVAASLERINRNFFWEGHAG------------FSSSKRWGLGLGGIKNH

Query:  NTALLTKWGWRFSKEESALWRQII-RSIHGKEPFD--W-FTKGKSGNSLRSPCVSTARVWRSVDSLASFNLGNGQRIGFWTDLW
        N AL++K GWR  +E+++LW  ++ +  H  E  D  W   KG   ++ RS  +    V   V     +  G+GQ+I FWTD W
Subjt:  NTALLTKWGWRFSKEESALWRQII-RSIHGKEPFD--W-FTKGKSGNSLRSPCVSTARVWRSVDSLASFNLGNGQRIGFWTDLW

P11369 LINE-1 retrotransposable element ORF2 protein4.3e-0420.45Show/hide
Query:  PKFSVFINGKPRGQMTASRGICQGDPLSPFLFLLVSEVLGEMINKLHSNSQFEGFLVGKDLIHLHCFNLPMILF----------------------SFKV
        P  ++ +NG+    +    G  QG PLSP+LF +V EVL   I +     + +G  +GK+ + +      MI++                       +K+
Subjt:  PKFSVFINGKPRGQMTASRGICQGDPLSPFLFLLVSEVLGEMINKLHSNSQFEGFLVGKDLIHLHCFNLPMILF----------------------SFKV

Query:  NWEKSALSGVNVGEEDLFQTANLLGCKAEKLPIIYLGLPLGGYPRQ--KMSWQPIMDRIHKKLDRWKRYNISRGGRHTLCNLVLVSLPTYYPSL--FSIP
        N  KS        ++   +             I YLG+ L    +     +++ +   I + L RWK    S  GR  +  + ++    Y  +     IP
Subjt:  NWEKSALSGVNVGEEDLFQTANLLGCKAEKLPIIYLGLPLGGYPRQ--KMSWQPIMDRIHKKLDRWKRYNISRGGRHTLCNLVLVSLPTYYPSL--FSIP

Query:  ENVAASLERINRNFFWEGH-----AGFSSSKR--WGLGLGGIKNHNTALLTKWGWRFSKEESA-LWRQI
              LE     F W              KR   G+ +  +K +  A++ K  W + ++     W +I
Subjt:  ENVAASLERINRNFFWEGH-----AGFSSSKR--WGLGLGGIKNHNTALLTKWGWRFSKEESA-LWRQI

P92555 Uncharacterized mitochondrial protein AtMg012501.2e-0644.44Show/hide
Query:  INGKPRGQMTASRGICQGDPLSPFLFLLVSEVLGEMINKLHSNSQFEGFLVGKD
        ING P+G +T SRG+ QGDPLSP+LF+L +EVL  +  +     +  G  V  +
Subjt:  INGKPRGQMTASRGICQGDPLSPFLFLLVSEVLGEMINKLHSNSQFEGFLVGKD

Arabidopsis top hitse value%identityAlignment
ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)8.5e-0844.44Show/hide
Query:  INGKPRGQMTASRGICQGDPLSPFLFLLVSEVLGEMINKLHSNSQFEGFLVGKD
        ING P+G +T SRG+ QGDPLSP+LF+L +EVL  +  +     +  G  V  +
Subjt:  INGKPRGQMTASRGICQGDPLSPFLFLLVSEVLGEMINKLHSNSQFEGFLVGKD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTGCCTAAAAAATCCCAAGTTTTCAGTCTTCATCAATGGTAAGCCAAGAGGACAAATGACAGCATCTAGAGGCATCTGCCAAGGGGACCCCCTCTCCCCCTTTTT
ATTTCTCCTAGTAAGTGAAGTTTTAGGAGAAATGATAAACAAGCTTCATAGTAACAGCCAGTTTGAAGGTTTCCTTGTTGGCAAAGACTTGATCCACCTCCATTGCTTTA
ATTTGCCGATGATACTCTTCTCTTTTAAAGTAAATTGGGAGAAATCAGCCCTTAGCGGTGTTAATGTGGGAGAGGAAGATTTGTTTCAAACAGCAAATCTGCTAGGGTGC
AAGGCAGAAAAGCTTCCGATTATATATTTAGGTCTCCCTTTGGGAGGCTACCCTCGGCAAAAGATGTCTTGGCAACCAATCATGGATCGAATTCACAAGAAACTAGATAG
GTGGAAAAGATATAACATCTCGAGAGGCGGAAGACATACCTTATGCAACTTAGTTCTGGTTAGCCTTCCTACATATTACCCATCTTTATTTTCAATACCTGAAAATGTGG
CTGCCTCTTTGGAGAGAATCAATCGAAACTTCTTTTGGGAAGGCCATGCTGGTTTCAGCTCCTCTAAAAGATGGGGTCTCGGCCTAGGAGGAATTAAAAATCATAACACT
GCTTTGCTCACTAAATGGGGTTGGAGATTCTCAAAAGAAGAGTCAGCTCTTTGGAGGCAAATAATTAGAAGCATTCATGGTAAGGAGCCATTTGATTGGTTCACTAAAGG
GAAGTCTGGTAATAGCCTAAGGAGTCCTTGTGTTAGCACTGCTAGAGTTTGGAGGTCGGTTGATTCGTTAGCCTCTTTTAATCTTGGTAACGGCCAAAGAATTGGCTTTT
GGACAGATCTTTGGGACCATGATACTTCCTTTTGGTCATTGGCCTTTAGAAGAAGTTTGAAGGATGATGAAATTGTAGATTTTCGATCACTACTTTCCCTCCTCTCTTCT
GAAAGAGTGGCTAACTCCAAAGATTATAGATCATGGTCCATTGATCCTCAAGGCCGGTTTTTCGTTAAGTCTCTTTCGGCTCACTTAAAATCTACCTCCCCAATGGATAA
ATGTGTTTCTGCAGCAATTTGGAAAACAGGCAGCCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCTGCCTAAAAAATCCCAAGTTTTCAGTCTTCATCAATGGTAAGCCAAGAGGACAAATGACAGCATCTAGAGGCATCTGCCAAGGGGACCCCCTCTCCCCCTTTTT
ATTTCTCCTAGTAAGTGAAGTTTTAGGAGAAATGATAAACAAGCTTCATAGTAACAGCCAGTTTGAAGGTTTCCTTGTTGGCAAAGACTTGATCCACCTCCATTGCTTTA
ATTTGCCGATGATACTCTTCTCTTTTAAAGTAAATTGGGAGAAATCAGCCCTTAGCGGTGTTAATGTGGGAGAGGAAGATTTGTTTCAAACAGCAAATCTGCTAGGGTGC
AAGGCAGAAAAGCTTCCGATTATATATTTAGGTCTCCCTTTGGGAGGCTACCCTCGGCAAAAGATGTCTTGGCAACCAATCATGGATCGAATTCACAAGAAACTAGATAG
GTGGAAAAGATATAACATCTCGAGAGGCGGAAGACATACCTTATGCAACTTAGTTCTGGTTAGCCTTCCTACATATTACCCATCTTTATTTTCAATACCTGAAAATGTGG
CTGCCTCTTTGGAGAGAATCAATCGAAACTTCTTTTGGGAAGGCCATGCTGGTTTCAGCTCCTCTAAAAGATGGGGTCTCGGCCTAGGAGGAATTAAAAATCATAACACT
GCTTTGCTCACTAAATGGGGTTGGAGATTCTCAAAAGAAGAGTCAGCTCTTTGGAGGCAAATAATTAGAAGCATTCATGGTAAGGAGCCATTTGATTGGTTCACTAAAGG
GAAGTCTGGTAATAGCCTAAGGAGTCCTTGTGTTAGCACTGCTAGAGTTTGGAGGTCGGTTGATTCGTTAGCCTCTTTTAATCTTGGTAACGGCCAAAGAATTGGCTTTT
GGACAGATCTTTGGGACCATGATACTTCCTTTTGGTCATTGGCCTTTAGAAGAAGTTTGAAGGATGATGAAATTGTAGATTTTCGATCACTACTTTCCCTCCTCTCTTCT
GAAAGAGTGGCTAACTCCAAAGATTATAGATCATGGTCCATTGATCCTCAAGGCCGGTTTTTCGTTAAGTCTCTTTCGGCTCACTTAAAATCTACCTCCCCAATGGATAA
ATGTGTTTCTGCAGCAATTTGGAAAACAGGCAGCCCATGA
Protein sequenceShow/hide protein sequence
MGCLKNPKFSVFINGKPRGQMTASRGICQGDPLSPFLFLLVSEVLGEMINKLHSNSQFEGFLVGKDLIHLHCFNLPMILFSFKVNWEKSALSGVNVGEEDLFQTANLLGC
KAEKLPIIYLGLPLGGYPRQKMSWQPIMDRIHKKLDRWKRYNISRGGRHTLCNLVLVSLPTYYPSLFSIPENVAASLERINRNFFWEGHAGFSSSKRWGLGLGGIKNHNT
ALLTKWGWRFSKEESALWRQIIRSIHGKEPFDWFTKGKSGNSLRSPCVSTARVWRSVDSLASFNLGNGQRIGFWTDLWDHDTSFWSLAFRRSLKDDEIVDFRSLLSLLSS
ERVANSKDYRSWSIDPQGRFFVKSLSAHLKSTSPMDKCVSAAIWKTGSP