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CSPI03G44910 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G44910
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationChr3:38460438..38461203
RNA-Seq ExpressionCSPI03G44910
SyntenyCSPI03G44910
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022857 - transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591653.1 hypothetical protein SDJN03_13999, partial [Cucurbita argyrosperma subsp. sororia]8.9e-3983.33Show/hide
Query:  MGMKWRNSRSQSIRLGQSCVSSNEQESKRL-GWQILWRKLKKEKRKMFSCSSVELRSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNLRL
        MG+KWRNSRSQSIRLGQSC S NEQESKRL GWQILW+K KKEKR++FSCSSVELRSSYNPNAY LNF++ENW S+PD+L RSFSARFADPSIVSR+ RL
Subjt:  MGMKWRNSRSQSIRLGQSCVSSNEQESKRL-GWQILWRKLKKEKRKMFSCSSVELRSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNLRL

Query:  LD
        LD
Subjt:  LD

KGN60340.2 hypothetical protein Csa_000895 [Cucumis sativus]4.3e-49100Show/hide
Query:  MGMKWRNSRSQSIRLGQSCVSSNEQESKRLGWQILWRKLKKEKRKMFSCSSVELRSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNLRLL
        MGMKWRNSRSQSIRLGQSCVSSNEQESKRLGWQILWRKLKKEKRKMFSCSSVELRSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNLRLL
Subjt:  MGMKWRNSRSQSIRLGQSCVSSNEQESKRLGWQILWRKLKKEKRKMFSCSSVELRSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNLRLL

Query:  D
        D
Subjt:  D

ONI33933.1 hypothetical protein PRUPE_1G454200 [Prunus persica]6.2e-1655.24Show/hide
Query:  MGMK-WRNSRSQSIRLGQSCVSSNEQESKRLGWQILWRKLKKE-KRKMFSCSSVELR-SSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNL
        MG+K W NSRSQS+RLGQ  + SN  +  R GWQ  W+K K + K+K FS S+V  + +SY+P  Y  NFD      EPDNLSRSFSARFADPS++  N 
Subjt:  MGMK-WRNSRSQSIRLGQSCVSSNEQESKRLGWQILWRKLKKE-KRKMFSCSSVELR-SSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNL

Query:  R-LLD
        R LLD
Subjt:  R-LLD

XP_022936244.1 uncharacterized protein LOC111442916 [Cucurbita moschata]1.4e-3984.31Show/hide
Query:  MGMKWRNSRSQSIRLGQSCVSSNEQESKRL-GWQILWRKLKKEKRKMFSCSSVELRSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNLRL
        MG+KWRNSRSQSIRLGQSC SSNEQESKRL GWQILW+K KKEKR++FSCSSVELRSSYNPNAY LNF++ENW S+PD+L RSFSARFADPSIVSR+ RL
Subjt:  MGMKWRNSRSQSIRLGQSCVSSNEQESKRL-GWQILWRKLKKEKRKMFSCSSVELRSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNLRL

Query:  LD
        LD
Subjt:  LD

XP_023536137.1 uncharacterized protein LOC111797385 [Cucurbita pepo subsp. pepo]1.4e-3984.31Show/hide
Query:  MGMKWRNSRSQSIRLGQSCVSSNEQESKR-LGWQILWRKLKKEKRKMFSCSSVELRSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNLRL
        MG+KWRNSRSQSIRLGQSC SSNEQESKR LGWQILW+K KKEKR++FSCSSVELRSSYNPNAY LNF++ENW S+PD+L RSFSARFADPSIVSR+ RL
Subjt:  MGMKWRNSRSQSIRLGQSCVSSNEQESKR-LGWQILWRKLKKEKRKMFSCSSVELRSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNLRL

Query:  LD
        LD
Subjt:  LD

TrEMBL top hitse value%identityAlignment
A0A0A0LJH9 Uncharacterized protein2.1e-49100Show/hide
Query:  MGMKWRNSRSQSIRLGQSCVSSNEQESKRLGWQILWRKLKKEKRKMFSCSSVELRSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNLRLL
        MGMKWRNSRSQSIRLGQSCVSSNEQESKRLGWQILWRKLKKEKRKMFSCSSVELRSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNLRLL
Subjt:  MGMKWRNSRSQSIRLGQSCVSSNEQESKRLGWQILWRKLKKEKRKMFSCSSVELRSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNLRLL

Query:  D
        D
Subjt:  D

A0A251RD41 Uncharacterized protein3.0e-1655.24Show/hide
Query:  MGMK-WRNSRSQSIRLGQSCVSSNEQESKRLGWQILWRKLKKE-KRKMFSCSSVELR-SSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNL
        MG+K W NSRSQS+RLGQ  + SN  +  R GWQ  W+K K + K+K FS S+V  + +SY+P  Y  NFD      EPDNLSRSFSARFADPS++  N 
Subjt:  MGMK-WRNSRSQSIRLGQSCVSSNEQESKRLGWQILWRKLKKE-KRKMFSCSSVELR-SSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNL

Query:  R-LLD
        R LLD
Subjt:  R-LLD

A0A5N5I1S5 Pentatricopeptide repeat-containing protein5.7e-1548.57Show/hide
Query:  MGMK-WRNSRSQSIRLGQSCVSSNEQESKRLGWQILWRKLKKEKRKMFSCSSV--ELRSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPS-IVSRN
        MG++ WRNSRSQSIRLG +    +     + GWQ  W++ K E++K+F  S+V  + ++SY+P+ Y  NFD+     EPDNL RSFSARFADPS ++  N
Subjt:  MGMK-WRNSRSQSIRLGQSCVSSNEQESKRLGWQILWRKLKKEKRKMFSCSSV--ELRSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPS-IVSRN

Query:  LRLLD
          LLD
Subjt:  LRLLD

A0A6J1F7R9 uncharacterized protein LOC1114429166.7e-4084.31Show/hide
Query:  MGMKWRNSRSQSIRLGQSCVSSNEQESKRL-GWQILWRKLKKEKRKMFSCSSVELRSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNLRL
        MG+KWRNSRSQSIRLGQSC SSNEQESKRL GWQILW+K KKEKR++FSCSSVELRSSYNPNAY LNF++ENW S+PD+L RSFSARFADPSIVSR+ RL
Subjt:  MGMKWRNSRSQSIRLGQSCVSSNEQESKRL-GWQILWRKLKKEKRKMFSCSSVELRSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNLRL

Query:  LD
        LD
Subjt:  LD

A0A6J5TRF8 Uncharacterized protein5.2e-1655.24Show/hide
Query:  MGMK-WRNSRSQSIRLGQSCVSSNEQESKRLGWQILWRKLKKE-KRKMFSCSSVELR-SSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPS-IVSRN
        MG+K W NSRSQSIRLGQ  +SSN  +  + GWQ  W+K K + K+K FS S+V  + +SY+P  Y  NFD      EPDNLSR FSARFADPS I+ +N
Subjt:  MGMK-WRNSRSQSIRLGQSCVSSNEQESKRLGWQILWRKLKKE-KRKMFSCSSVELR-SSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPS-IVSRN

Query:  LRLLD
          LLD
Subjt:  LRLLD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G25735.1 unknown protein1.8e-0536.36Show/hide
Query:  NSRSQSIRLGQSCVSSNEQESKRLGWQIL--WRKLKKEKRKMFSCSSVELRSSYNPNAYHLNFDE-ENW--DSEPDNLSRSFSARFADPSIVSRNLRLL
        +S  ++I LG+   S  EQ+  +   ++L  W+ L  + + + S +S     +Y P  Y LNFD+   W    EP+NLSRSFS RFADP+ +     LL
Subjt:  NSRSQSIRLGQSCVSSNEQESKRLGWQIL--WRKLKKEKRKMFSCSSVELRSSYNPNAYHLNFDE-ENW--DSEPDNLSRSFSARFADPSIVSRNLRLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATGAAATGGCGAAATTCACGTAGTCAAAGTATCAGATTGGGACAGAGCTGTGTTTCTTCAAATGAACAAGAAAGCAAAAGATTGGGATGGCAAATTTTGTGGAG
AAAGTTGAAGAAGGAGAAGAGAAAAATGTTCAGTTGTTCTTCTGTTGAATTGCGTTCTTCTTATAATCCAAATGCTTATCACTTAAATTTTGATGAAGAAAATTGGGATT
CTGAGCCTGATAATCTTTCCAGATCTTTCTCTGCTCGTTTTGCTGATCCTTCAATTGTTTCAAGAAACTTGAGATTGTTGGATTGA
mRNA sequenceShow/hide mRNA sequence
GCTCTTTTCTTGTGTTTAAGAACAAACCAATCTCAATTCCCTTTTAAACCTACCATCTCCATTTGATCTCCATTTCTCTCTCAACCTTTCTACCCTTATTTCATCGACCC
TTTTGGTTTTTAGTTCTAATTTTCATCTTTGAAGCTTCATGGGAATGAAATGGCGAAATTCACGTAGTCAAAGTATCAGATTGGGACAGAGCTGTGTTTCTTCAAATGAA
CAAGAAAGCAAAAGATTGGGATGGCAAATTTTGTGGAGAAAGTTGAAGAAGGAGAAGAGAAAAATGTTCAGTTGTTCTTCTGTTGAATTGCGTTCTTCTTATAATCCAAA
TGCTTATCACTTAAATTTTGATGAAGAAAATTGGGATTCTGAGCCTGATAATCTTTCCAGATCTTTCTCTGCTCGTTTTGCTGATCCTTCAATTGTTTCAAGAAACTTGA
GATTGTTGGATTGAAACTTATTGGTAATCTTATGGGTTTTGTGTAATTTTTGTAACCCATTTTCCAAATTCCAAATGATTAGTTCTAAGTTGTGATTATGTGTTTGTTTC
AATGAGACTGAGTTTGTGTTCTGTTTATACTTTTCTCTAAATAGAAGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAATATACTTTGTTGCAAATTACTGGAAAT
ATTTCAAAGTTTATTCATTGTTTTAGCTGTAAGTAAAGCAAGATTTTCCATAGAATTTCTTTGAAAAAATTTAGCGCTTTAGTAACTATTTGGTTTCATTCGTCAG
Protein sequenceShow/hide protein sequence
MGMKWRNSRSQSIRLGQSCVSSNEQESKRLGWQILWRKLKKEKRKMFSCSSVELRSSYNPNAYHLNFDEENWDSEPDNLSRSFSARFADPSIVSRNLRLLD