; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G44960 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G44960
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationChr3:38507387..38509656
RNA-Seq ExpressionCSPI03G44960
SyntenyCSPI03G44960
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024539.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]4.8e-13176.42Show/hide
Query:  MASTGKRVLALARNVSLSVPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSVKSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLE
        MA    RVLALA+  S  VPL+ Q+PHY  I R F STDPS SI NPL+L+L+QEP+SSVKSVLDS EN FL SSRLS  ALVTSLISSS  KKAQL LE
Subjt:  MASTGKRVLALARNVSLSVPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSVKSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLE

Query:  WKLENMSKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLHD
        W+LE MSK+NERD DFYI+LI LCG+L+N  LAMRVF  MEFQGVKPTVTAFNSLIE CISS+NMITAFS+FE+MKNS++ KPN DTF+YFISAFAK HD
Subjt:  WKLENMSKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLHD

Query:  VNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVW
        VNSM+AWYSAK+AFEFS DLRTYEALIHGSVKS CFDF V+CF+EM+LS IVPN IIL+NMLEG CKRK+ DE+KKFL VVLD GWEI+WNVVEKFIP+W
Subjt:  VNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVW

Query:  FESGELEGMKEILTKLNK
        FESGE EGM+EILTKLN+
Subjt:  FESGELEGMKEILTKLNK

XP_004136433.1 pentatricopeptide repeat-containing protein At1g12775, mitochondrial [Cucumis sativus]4.0e-178100Show/hide
Query:  MASTGKRVLALARNVSLSVPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSVKSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLE
        MASTGKRVLALARNVSLSVPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSVKSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLE
Subjt:  MASTGKRVLALARNVSLSVPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSVKSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLE

Query:  WKLENMSKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLHD
        WKLENMSKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLHD
Subjt:  WKLENMSKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLHD

Query:  VNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVW
        VNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVW
Subjt:  VNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVW

Query:  FESGELEGMKEILTKLNKWN
        FESGELEGMKEILTKLNKWN
Subjt:  FESGELEGMKEILTKLNKWN

XP_008466249.1 PREDICTED: pentatricopeptide repeat-containing protein At3g09060-like [Cucumis melo]1.3e-16091.56Show/hide
Query:  MASTGKRVLALARNVSLSVPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSVKSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLE
        MASTGKRVL LARNVS S+PLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSVKSVLDSQENGFLCSSRLSLN LVTSLISSS  KKAQLVLE
Subjt:  MASTGKRVLALARNVSLSVPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSVKSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLE

Query:  WKLENMSKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLHD
        WKLE MSK+NE D D YINLI LCGKLR+S LAMRVF VMEFQGVKPTVTAFNSLIEACISS+NMITAF IFEVMKNSKNFKPNTDTFYYFIS F+KL D
Subjt:  WKLENMSKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLHD

Query:  VNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVW
        VNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKS CFDF VKCFEEM+LSDIVPN IILENMLEGLCKRKNFDEVKKFLNVVLDNGWEI+WNVVEKFIPVW
Subjt:  VNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVW

Query:  FESGELEGMKEILTKLNKWN
        FESGELEGMKEILTK+NK N
Subjt:  FESGELEGMKEILTKLNKWN

XP_022975914.1 pentatricopeptide repeat-containing protein At2g37230-like isoform X1 [Cucurbita maxima]2.0e-12975.47Show/hide
Query:  MASTGKRVLALARNVSLSVPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSVKSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLE
        MA    RVLALA+  S  +PL+ Q+ HY  I R F STDPS SI NPL+L+L+QEP+SSVKSVLDS EN FL SSRLS  ALVTSLISSS  KKAQL LE
Subjt:  MASTGKRVLALARNVSLSVPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSVKSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLE

Query:  WKLENMSKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLHD
        W+LE M+K+NERD DFYI+LI LCG+L+N  LAMRVF  MEFQGVKPTVTAFNSLIE CISS+NMITAFS+FE+MKNS++FKPN DTF+YFISAFAKL D
Subjt:  WKLENMSKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLHD

Query:  VNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVW
        VNSM+AWYSAK+AFEFS DLRTYEALIHGSV S CFDF V+CF+EM+LS IVPN IIL+NMLEG CKRK+ DE+KKFL VVLD GWEI WNVVEKFIP+W
Subjt:  VNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVW

Query:  FESGELEGMKEILTKLNK
        FESGE EGM+EILTKLN+
Subjt:  FESGELEGMKEILTKLNK

XP_038897030.1 pentatricopeptide repeat-containing protein At1g12775, mitochondrial-like [Benincasa hispida]1.9e-14382.81Show/hide
Query:  MASTGKRVLALARNVSLSVPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSVKSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLE
        MA TGKRVLALA + S  +PLQ QQ H+PL FR F STDPS  I+NPLLL+LLQEPTSSVKSVLDSQEN FLCSSRLS N LVTSLISSS  KKAQLVLE
Subjt:  MASTGKRVLALARNVSLSVPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSVKSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLE

Query:  WKLENMSKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLHD
        WKLE MSK+NERD DFYI+L+ LCG+L+NS LAM VF VMEFQGVKPTVTAFNSLIEACISS NMITAFSIFEVMKNS+++KPN+DTFY+FI  FAKLHD
Subjt:  WKLENMSKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLHD

Query:  VNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVW
        VNSMQAWYSAKKAF FSPDLRTYEALIHGSVKS CFDF VKCFEEM+LS IVPNTIILENMLEGLCKRKN DEVKKFLNVVLD GWEI+WNVV KF P+W
Subjt:  VNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVW

Query:  FESGELEGMKEILTKLNKWN
        FESGELEGM+EILTK+NK N
Subjt:  FESGELEGMKEILTKLNKWN

TrEMBL top hitse value%identityAlignment
A0A0A0LJI4 Uncharacterized protein2.0e-178100Show/hide
Query:  MASTGKRVLALARNVSLSVPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSVKSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLE
        MASTGKRVLALARNVSLSVPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSVKSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLE
Subjt:  MASTGKRVLALARNVSLSVPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSVKSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLE

Query:  WKLENMSKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLHD
        WKLENMSKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLHD
Subjt:  WKLENMSKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLHD

Query:  VNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVW
        VNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVW
Subjt:  VNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVW

Query:  FESGELEGMKEILTKLNKWN
        FESGELEGMKEILTKLNKWN
Subjt:  FESGELEGMKEILTKLNKWN

A0A1S3CS56 pentatricopeptide repeat-containing protein At3g09060-like6.3e-16191.56Show/hide
Query:  MASTGKRVLALARNVSLSVPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSVKSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLE
        MASTGKRVL LARNVS S+PLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSVKSVLDSQENGFLCSSRLSLN LVTSLISSS  KKAQLVLE
Subjt:  MASTGKRVLALARNVSLSVPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSVKSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLE

Query:  WKLENMSKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLHD
        WKLE MSK+NE D D YINLI LCGKLR+S LAMRVF VMEFQGVKPTVTAFNSLIEACISS+NMITAF IFEVMKNSKNFKPNTDTFYYFIS F+KL D
Subjt:  WKLENMSKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLHD

Query:  VNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVW
        VNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKS CFDF VKCFEEM+LSDIVPN IILENMLEGLCKRKNFDEVKKFLNVVLDNGWEI+WNVVEKFIPVW
Subjt:  VNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVW

Query:  FESGELEGMKEILTKLNKWN
        FESGELEGMKEILTK+NK N
Subjt:  FESGELEGMKEILTKLNKWN

A0A5D3E5Z9 Pentatricopeptide repeat-containing protein6.3e-16191.56Show/hide
Query:  MASTGKRVLALARNVSLSVPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSVKSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLE
        MASTGKRVL LARNVS S+PLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSVKSVLDSQENGFLCSSRLSLN LVTSLISSS  KKAQLVLE
Subjt:  MASTGKRVLALARNVSLSVPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSVKSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLE

Query:  WKLENMSKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLHD
        WKLE MSK+NE D D YINLI LCGKLR+S LAMRVF VMEFQGVKPTVTAFNSLIEACISS+NMITAF IFEVMKNSKNFKPNTDTFYYFIS F+KL D
Subjt:  WKLENMSKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLHD

Query:  VNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVW
        VNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKS CFDF VKCFEEM+LSDIVPN IILENMLEGLCKRKNFDEVKKFLNVVLDNGWEI+WNVVEKFIPVW
Subjt:  VNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVW

Query:  FESGELEGMKEILTKLNKWN
        FESGELEGMKEILTK+NK N
Subjt:  FESGELEGMKEILTKLNKWN

A0A6J1FC94 pentatricopeptide repeat-containing protein At1g63080, mitochondrial-like isoform X18.1e-12473.8Show/hide
Query:  MASTGKRVLALARNVSLSVPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSVKSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLE
        MA    RVLALA+  S  VPL+ Q+PHY  I R F STDPS SI NPL+L+L+QEP+SSVKSVLDS EN FL SS LS  ALVTSLISSS  KKAQL LE
Subjt:  MASTGKRVLALARNVSLSVPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSVKSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLE

Query:  WKLENMSKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLHD
        W+LE MSK+NERD DFYI+LI LCG+L+N  LAMRVF  MEFQGV+PTVTAFNSLIE CISS+NMITAFS+FE+MKNS++ KPN DTF+YFISAFAK HD
Subjt:  WKLENMSKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLHD

Query:  VNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVW
        VNSM+AWYSA +AFEFS DLRTYEALIHGSVKS CFDF V+CF+EM+LS IVPN IIL+NMLEG CKRK+ DE+KKFL VVLD GWEI+WNVVEKFIP+W
Subjt:  VNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVW

Query:  FESGELEGMKEIL
        FESG  +G +  L
Subjt:  FESGELEGMKEIL

A0A6J1II25 pentatricopeptide repeat-containing protein At2g37230-like isoform X19.8e-13075.47Show/hide
Query:  MASTGKRVLALARNVSLSVPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSVKSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLE
        MA    RVLALA+  S  +PL+ Q+ HY  I R F STDPS SI NPL+L+L+QEP+SSVKSVLDS EN FL SSRLS  ALVTSLISSS  KKAQL LE
Subjt:  MASTGKRVLALARNVSLSVPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSVKSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLE

Query:  WKLENMSKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLHD
        W+LE M+K+NERD DFYI+LI LCG+L+N  LAMRVF  MEFQGVKPTVTAFNSLIE CISS+NMITAFS+FE+MKNS++FKPN DTF+YFISAFAKL D
Subjt:  WKLENMSKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLHD

Query:  VNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVW
        VNSM+AWYSAK+AFEFS DLRTYEALIHGSV S CFDF V+CF+EM+LS IVPN IIL+NMLEG CKRK+ DE+KKFL VVLD GWEI WNVVEKFIP+W
Subjt:  VNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVW

Query:  FESGELEGMKEILTKLNK
        FESGE EGM+EILTKLN+
Subjt:  FESGELEGMKEILTKLNK

SwissProt top hitse value%identityAlignment
Q9C8T7 Pentatricopeptide repeat-containing protein At1g633302.3e-1123.01Show/hide
Query:  NALVTSLISSSMLKKAQLVLEWKLENM--SKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKN
        N +   ++ + + K+  + L + L N   + K E D+  +  +I    K R+   A+ +F  ME +G++P V  ++SLI    S      A  +   M  
Subjt:  NALVTSLISSSMLKKAQLVLEWKLENM--SKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKN

Query:  SKNFKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKF
         K   PN  TF   I AF K       +  +         PD+ TY +LI+G    +  D   + FE M+  D  P+      +++G CK K  ++  + 
Subjt:  SKNFKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKF

Query:  LNVVLDNGWEIDWNVVEKFIPVWFESGELEGMKEILTKL
           +   G   D       I   F  G+ +  +++  ++
Subjt:  LNVVLDNGWEIDWNVVEKFIPVWFESGELEGMKEILTKL

Q9LQ14 Pentatricopeptide repeat-containing protein At1g62930, chloroplastic3.8e-1426.51Show/hide
Query:  LENMSK-KNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLHDV
        L+ M K K E D+  Y  +I      +N + A+ +F  M+ +G++P V  +NSLI    +      A  +   M   K   PN  TF   I AF K   +
Subjt:  LENMSK-KNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLHDV

Query:  NSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVWF
           +  Y         PD+ TY +LI+G    +  D     FE MI  D  PN +    +++G CK K  +E  +    +   G   +       I   F
Subjt:  NSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVWF

Query:  ESGELEGMKEILTKL
        ++G+ +  ++I  K+
Subjt:  ESGELEGMKEILTKL

Q9M302 Pentatricopeptide repeat-containing protein At3g488106.6e-1421.76Show/hide
Query:  NALVTSLISSSMLKKAQLVLEWKLENMSKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSK
        NAL+  L      K A  ++   +E     N       IN++C  G++    LA      M  +G  P +   +SL++ C        A  ++  M    
Subjt:  NALVTSLISSSMLKKAQLVLEWKLENMSKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSK

Query:  NFKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLN
          +PN   +   +  F    ++    + +S  +    SP++RTY +LI+G  K    D  V  + +M+ S   PN ++  NM+E LC+   F E +  + 
Subjt:  NFKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLN

Query:  VVLDNGWEIDWNVVEKFIPVWFESGELEGMKEILTKLNK
        ++              FI    ++G L+  +++  ++ +
Subjt:  VVLDNGWEIDWNVVEKFIPVWFESGELEGMKEILTKLNK

Q9SH26 Pentatricopeptide repeat-containing protein At1g634009.5e-1328.06Show/hide
Query:  NALVTSLISSSMLKKAQLVLEWKLENM--SKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKN
        N +   ++ + + K+  + L + L N   + K E ++  Y  +I    K R+   A+ +F  ME +GV+P V  ++SLI    +      A  +   M  
Subjt:  NALVTSLISSSMLKKAQLVLEWKLENM--SKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKN

Query:  SKNFKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDE
         K   PN  TF   I AF K   +   +  Y         PD+ TY +LI+G    +  D     FE MI  D  PN +    ++ G CK K  DE
Subjt:  SKNFKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDE

Q9SXD8 Pentatricopeptide repeat-containing protein At1g625906.1e-1223.01Show/hide
Query:  NALVTSLISSSMLKKAQLVLEWKLENM--SKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKN
        N +   ++ + + K+    L   L N   + K E D+  +  +I    K R+   A+ +F  ME +G++P V  ++SLI    S      A  +   M  
Subjt:  NALVTSLISSSMLKKAQLVLEWKLENM--SKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKN

Query:  SKNFKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKF
         K   PN  TF   I AF K       +  Y         PD+ TY +L++G    +  D   + FE M+  D  P+ +    +++G CK K  ++  + 
Subjt:  SKNFKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKF

Query:  LNVVLDNGWEIDWNVVEKFIPVWFESGELEGMKEILTKL
           +   G   D       I   F  G+ +  +++  ++
Subjt:  LNVVLDNGWEIDWNVVEKFIPVWFESGELEGMKEILTKL

Arabidopsis top hitse value%identityAlignment
AT1G62590.1 pentatricopeptide (PPR) repeat-containing protein4.4e-1323.01Show/hide
Query:  NALVTSLISSSMLKKAQLVLEWKLENM--SKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKN
        N +   ++ + + K+    L   L N   + K E D+  +  +I    K R+   A+ +F  ME +G++P V  ++SLI    S      A  +   M  
Subjt:  NALVTSLISSSMLKKAQLVLEWKLENM--SKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKN

Query:  SKNFKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKF
         K   PN  TF   I AF K       +  Y         PD+ TY +L++G    +  D   + FE M+  D  P+ +    +++G CK K  ++  + 
Subjt:  SKNFKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKF

Query:  LNVVLDNGWEIDWNVVEKFIPVWFESGELEGMKEILTKL
           +   G   D       I   F  G+ +  +++  ++
Subjt:  LNVVLDNGWEIDWNVVEKFIPVWFESGELEGMKEILTKL

AT1G62930.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.7e-1526.51Show/hide
Query:  LENMSK-KNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLHDV
        L+ M K K E D+  Y  +I      +N + A+ +F  M+ +G++P V  +NSLI    +      A  +   M   K   PN  TF   I AF K   +
Subjt:  LENMSK-KNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLHDV

Query:  NSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVWF
           +  Y         PD+ TY +LI+G    +  D     FE MI  D  PN +    +++G CK K  +E  +    +   G   +       I   F
Subjt:  NSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVWF

Query:  ESGELEGMKEILTKL
        ++G+ +  ++I  K+
Subjt:  ESGELEGMKEILTKL

AT1G63330.1 Pentatricopeptide repeat (PPR) superfamily protein1.7e-1223.01Show/hide
Query:  NALVTSLISSSMLKKAQLVLEWKLENM--SKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKN
        N +   ++ + + K+  + L + L N   + K E D+  +  +I    K R+   A+ +F  ME +G++P V  ++SLI    S      A  +   M  
Subjt:  NALVTSLISSSMLKKAQLVLEWKLENM--SKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKN

Query:  SKNFKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKF
         K   PN  TF   I AF K       +  +         PD+ TY +LI+G    +  D   + FE M+  D  P+      +++G CK K  ++  + 
Subjt:  SKNFKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKF

Query:  LNVVLDNGWEIDWNVVEKFIPVWFESGELEGMKEILTKL
           +   G   D       I   F  G+ +  +++  ++
Subjt:  LNVVLDNGWEIDWNVVEKFIPVWFESGELEGMKEILTKL

AT1G63400.1 Pentatricopeptide repeat (PPR) superfamily protein6.7e-1428.06Show/hide
Query:  NALVTSLISSSMLKKAQLVLEWKLENM--SKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKN
        N +   ++ + + K+  + L + L N   + K E ++  Y  +I    K R+   A+ +F  ME +GV+P V  ++SLI    +      A  +   M  
Subjt:  NALVTSLISSSMLKKAQLVLEWKLENM--SKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKN

Query:  SKNFKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDE
         K   PN  TF   I AF K   +   +  Y         PD+ TY +LI+G    +  D     FE MI  D  PN +    ++ G CK K  DE
Subjt:  SKNFKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDE

AT3G48810.1 Pentatricopeptide repeat (PPR) superfamily protein4.7e-1521.76Show/hide
Query:  NALVTSLISSSMLKKAQLVLEWKLENMSKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSK
        NAL+  L      K A  ++   +E     N       IN++C  G++    LA      M  +G  P +   +SL++ C        A  ++  M    
Subjt:  NALVTSLISSSMLKKAQLVLEWKLENMSKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSK

Query:  NFKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLN
          +PN   +   +  F    ++    + +S  +    SP++RTY +LI+G  K    D  V  + +M+ S   PN ++  NM+E LC+   F E +  + 
Subjt:  NFKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLN

Query:  VVLDNGWEIDWNVVEKFIPVWFESGELEGMKEILTKLNK
        ++              FI    ++G L+  +++  ++ +
Subjt:  VVLDNGWEIDWNVVEKFIPVWFESGELEGMKEILTKLNK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCACGGGGAAAAGGGTTTTGGCATTGGCCAGAAATGTTTCCCTCAGTGTTCCACTTCAGTCACAGCAACCTCATTATCCACTTATTTTCCGGGGATTCTTCTC
CACTGATCCTTCAATTTCCATTACGAATCCTCTGCTTCTCAAATTGCTCCAGGAGCCAACTTCGTCTGTCAAATCCGTGCTCGATTCCCAGGAAAATGGTTTTCTCTGTA
GCTCCCGTCTTTCCTTGAATGCTCTCGTTACGTCTCTTATATCTTCTTCAATGCTCAAGAAGGCTCAGCTGGTTTTGGAATGGAAATTGGAGAATATGAGCAAAAAAAAT
GAGAGAGATCTTGATTTCTACATCAACCTGATATGTCTATGCGGAAAGCTTAGAAATTCCTCTCTTGCAATGCGTGTCTTCAATGTTATGGAATTTCAAGGAGTTAAACC
CACGGTGACTGCTTTCAATTCACTTATAGAGGCTTGTATATCTTCCAATAATATGATAACTGCCTTTAGCATATTTGAAGTAATGAAAAACTCCAAAAATTTTAAACCCA
ACACTGACACTTTCTATTATTTCATTTCTGCATTCGCCAAATTGCACGATGTCAACTCTATGCAAGCATGGTATTCAGCCAAAAAAGCATTTGAATTCTCTCCCGACCTT
CGAACCTACGAAGCTCTTATACATGGTAGTGTGAAATCGAACTGCTTTGATTTTGGTGTCAAATGTTTTGAGGAAATGATCTTATCTGACATTGTACCCAACACAATCAT
ATTGGAGAATATGCTTGAGGGGCTCTGTAAAAGGAAAAATTTTGATGAAGTGAAGAAGTTCCTAAATGTTGTGCTTGACAATGGATGGGAGATCGATTGGAATGTGGTTG
AGAAATTCATTCCAGTATGGTTTGAATCTGGGGAGTTGGAAGGGATGAAGGAGATCCTTACTAAGCTAAATAAGTGGAATTAG
mRNA sequenceShow/hide mRNA sequence
AAAAGCTCGAACGGCCATTACACATTCTAAGCATTGCATCAGGAACTCGGGAGCAAACAATGGCGTCCACGGGGAAAAGGGTTTTGGCATTGGCCAGAAATGTTTCCCTC
AGTGTTCCACTTCAGTCACAGCAACCTCATTATCCACTTATTTTCCGGGGATTCTTCTCCACTGATCCTTCAATTTCCATTACGAATCCTCTGCTTCTCAAATTGCTCCA
GGAGCCAACTTCGTCTGTCAAATCCGTGCTCGATTCCCAGGAAAATGGTTTTCTCTGTAGCTCCCGTCTTTCCTTGAATGCTCTCGTTACGTCTCTTATATCTTCTTCAA
TGCTCAAGAAGGCTCAGCTGGTTTTGGAATGGAAATTGGAGAATATGAGCAAAAAAAATGAGAGAGATCTTGATTTCTACATCAACCTGATATGTCTATGCGGAAAGCTT
AGAAATTCCTCTCTTGCAATGCGTGTCTTCAATGTTATGGAATTTCAAGGAGTTAAACCCACGGTGACTGCTTTCAATTCACTTATAGAGGCTTGTATATCTTCCAATAA
TATGATAACTGCCTTTAGCATATTTGAAGTAATGAAAAACTCCAAAAATTTTAAACCCAACACTGACACTTTCTATTATTTCATTTCTGCATTCGCCAAATTGCACGATG
TCAACTCTATGCAAGCATGGTATTCAGCCAAAAAAGCATTTGAATTCTCTCCCGACCTTCGAACCTACGAAGCTCTTATACATGGTAGTGTGAAATCGAACTGCTTTGAT
TTTGGTGTCAAATGTTTTGAGGAAATGATCTTATCTGACATTGTACCCAACACAATCATATTGGAGAATATGCTTGAGGGGCTCTGTAAAAGGAAAAATTTTGATGAAGT
GAAGAAGTTCCTAAATGTTGTGCTTGACAATGGATGGGAGATCGATTGGAATGTGGTTGAGAAATTCATTCCAGTATGGTTTGAATCTGGGGAGTTGGAAGGGATGAAGG
AGATCCTTACTAAGCTAAATAAGTGGAATTAGGCTTTCGATGACAATGTATAGTCAGTCATAAGTAGAATGATAACAATGTATATCCCATGTCCAATACAATATTCTGCT
TTGTCTTAGGGAGTTGGAAACCCTGGATTGCTTGTTTTTGCATTATGAGTTTGCTTTTCTAAAGGGTAGTGTATTCATTTTAGTACTTTTGAGGTGGCTACCCTCTATAA
GAAAATTTATGAATGGTGATAAACGGTCTTGATGGTCGAAGTTCATGTGAAAGAGGCAAAATCCTTTGGAGATGTGCGACTCATGCGCTTTTGTGGTCATTTTTTGGAAA
ATAGAGGAATACTAAG
Protein sequenceShow/hide protein sequence
MASTGKRVLALARNVSLSVPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSVKSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLEWKLENMSKKN
ERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDL
RTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVWFESGELEGMKEILTKLNKWN