CuGenDBv2

Gene ID	CSPI03G45350
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	t-SNARE coiled-coil homology domain-containing protein
Genome location	Chr3:38800662..38804143
RNA-Seq Expression	CSPI03G45350
Synteny	CSPI03G45350
Gene Ontology terms	GO:0015031 - protein transport (biological process) GO:0030173 - integral component of Golgi membrane (cellular component)
InterPro domains	IPR000727 - Target SNARE coiled-coil homology domain IPR039897 - BET1-like protein IPR039899 - BET1, SNARE domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004136265.1 bet1-like protein At1g29060 [Cucumis sativus]

1.4e-66

100

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Query:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK
        LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK

XP_008466185.1 PREDICTED: bet1-like protein At1g29060 [Cucumis melo]

1.3e-64

97.06

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Query:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MASSSFRGGSSFYNGDAA FRSREGLSTRPAA+SDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK
        LNKKIIQNGSNHV+QVVVFALICFFIVYMW+KMSRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK

XP_022940948.1 bet1-like protein At1g29060 [Cucurbita moschata]

2.7e-62

93.38

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Query:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MAS+S+RGGSSFYNGDAA +RSREGLSTRPAA+SDEIQLQIDPMQGDLDD+IVGLH QVKRLRNIAQ+IGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK
        LNKKIIQNGSNHVVQVVVFALICFFIVYMWSK+SRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK

XP_022980898.1 bet1-like protein At1g29060 [Cucurbita maxima]

5.9e-62

92.65

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Query:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MAS+S+RGGSSFYNGDAA +RSREGLSTRP+A+SDEIQLQIDPMQGDLDD+IVGLH QVKRLRNIAQ+IGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK
        LNKKIIQNGSNHVVQVVVFALICFFIVYMWSK+SRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK

XP_038896659.1 bet1-like protein At1g29060 [Benincasa hispida]

1.2e-62

94.85

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Query:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MASSSFRGGSSFYN +AA +RSREGLSTRPAA+SDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK
        LNKKIIQNGSNHVVQVVVFALICFFIVYMWSK+SR+
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LHL4 t-SNARE coiled-coil homology domain-containing protein

6.6e-67

100

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Query:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK
        LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK

A0A1S3CQM7 bet1-like protein At1g29060

6.2e-65

97.06

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Query:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MASSSFRGGSSFYNGDAA FRSREGLSTRPAA+SDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK
        LNKKIIQNGSNHV+QVVVFALICFFIVYMW+KMSRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK

A0A5A7TAQ3 Bet1-like protein

6.2e-65

97.06

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Query:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MASSSFRGGSSFYNGDAA FRSREGLSTRPAA+SDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK
        LNKKIIQNGSNHV+QVVVFALICFFIVYMW+KMSRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK

A0A6J1FQQ6 bet1-like protein At1g29060

1.3e-62

93.38

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Query:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MAS+S+RGGSSFYNGDAA +RSREGLSTRPAA+SDEIQLQIDPMQGDLDD+IVGLH QVKRLRNIAQ+IGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK
        LNKKIIQNGSNHVVQVVVFALICFFIVYMWSK+SRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK

A0A6J1J0M1 bet1-like protein At1g29060

2.9e-62

92.65

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Query:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MAS+S+RGGSSFYNGDAA +RSREGLSTRP+A+SDEIQLQIDPMQGDLDD+IVGLH QVKRLRNIAQ+IGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK
        LNKKIIQNGSNHVVQVVVFALICFFIVYMWSK+SRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK

SwissProt top hits

e value

%identity

Alignment

Q8L9S0 Bet1-like protein At1g29060

7.6e-44

66.18

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Query:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MAS+   GGS +  G A  +RSREGLSTR A+ S+EIQL+IDPM  DLDDEI+GLH QV++L+NIAQ+IG+EAKSQ+DFLD+LQMTLI+AQAGVKNN+R+
Subjt:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK
        LN  II++G+NH++ VV+FAL+ FFI+YMWSKM ++
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK

Q8VXX9 Bet1-like protein At4g14600

2.2e-43

65.22

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Query:  MASSSFRGGS--SFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNV
        MAS+  R G+  S Y G AA +RSREGLSTR AA S+EIQL+IDPM  DLDDEI GLH QV++L+NIAQ+IG+EAK Q+DFLD+LQMTLI+AQAGVKNN+
Subjt:  MASSSFRGGS--SFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNV

Query:  RRLNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK
        R+LN  II++G+NH++ VV+FAL+ FF++Y+WSKM ++
Subjt:  RRLNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK

Arabidopsis top hits

e value

%identity

Alignment

AT1G29060.1 Target SNARE coiled-coil domain protein

5.4e-45

66.18

Show/hide

Query:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MAS+   GGS +  G A  +RSREGLSTR A+ S+EIQL+IDPM  DLDDEI+GLH QV++L+NIAQ+IG+EAKSQ+DFLD+LQMTLI+AQAGVKNN+R+
Subjt:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK
        LN  II++G+NH++ VV+FAL+ FFI+YMWSKM ++
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK

AT4G14600.1 Target SNARE coiled-coil domain protein

1.6e-44

65.22

Show/hide

Query:  MASSSFRGGS--SFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNV
        MAS+  R G+  S Y G AA +RSREGLSTR AA S+EIQL+IDPM  DLDDEI GLH QV++L+NIAQ+IG+EAK Q+DFLD+LQMTLI+AQAGVKNN+
Subjt:  MASSSFRGGS--SFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNV

Query:  RRLNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK
        R+LN  II++G+NH++ VV+FAL+ FF++Y+WSKM ++
Subjt:  RRLNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK

Sequences

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CDS sequence

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ATGGCGTCCAGTTCGTTTCGTGGCGGTAGTTCCTTCTACAATGGCGACGCCGCCCATTTTCGCTCCAGGGAGGGGCTTAGCACAAGACCGGCGGCTTCTTCCGATGAAAT
TCAACTGCAGATCGATCCGATGCAAGGGGACTTGGACGACGAGATCGTTGGTCTCCACAGCCAAGTTAAAAGGCTTAGAAACATTGCTCAAGACATTGGGACAGAAGCAA
AGTCTCAGCAAGATTTTCTAGATCAGTTGCAAATGACATTGATAAAAGCTCAGGCGGGGGTGAAGAACAATGTAAGAAGATTGAACAAAAAGATCATACAGAATGGATCA
AATCATGTCGTCCAGGTCGTCGTATTTGCATTGATCTGTTTCTTTATAGTATACATGTGGTCGAAAATGTCCAGAAAATGA

mRNA sequence

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GTAAAGAGAACGAAAGAAAATTGAAAATCTATATAAGGTTTGGAAATACTCGAATTTAATATATATATATAATTAGACCTTTCCACACCCAGAAATGCGTGTTTATATTT
TTCAAAACAAATATAACTATTAAACGCTTCGCCAACGCGGCTCTGATCGGAAAATTCCCAATTTGCTTCGATCTCTTACCTTCTTGTTGGACCCCAGGATTCTGAAATTG
GTTTTACCGATTCGTCTACTTCCCGTTCCATTCATCACTCCTCGGATTAGGTTTTCATGGCGTCCAGTTCGTTTCGTGGCGGTAGTTCCTTCTACAATGGCGACGCCGCC
CATTTTCGCTCCAGGGAGGGGCTTAGCACAAGACCGGCGGCTTCTTCCGATGAAATTCAACTGCAGATCGATCCGATGCAAGGGGACTTGGACGACGAGATCGTTGGTCT
CCACAGCCAAGTTAAAAGGCTTAGAAACATTGCTCAAGACATTGGGACAGAAGCAAAGTCTCAGCAAGATTTTCTAGATCAGTTGCAAATGACATTGATAAAAGCTCAGG
CGGGGGTGAAGAACAATGTAAGAAGATTGAACAAAAAGATCATACAGAATGGATCAAATCATGTCGTCCAGGTCGTCGTATTTGCATTGATCTGTTTCTTTATAGTATAC
ATGTGGTCGAAAATGTCCAGAAAATGAATGTTTTTTCTCATTTTGCTCACTATGAATGGAATACAAGTTTTCTGGCCGGCGAAAAGCAGGAAATGATGTCTAAAATACAC
TGTCACGTCTCAGGTTATAGCATCGGACAGTGATAAAATAGGCTTTTGTTTCTCTTGTAAAAACTTTTGAGTATACTTTTTATACGTCACGATGTAACTTTATAGTATTA
ATTTATTCATGCCTAAGGTTTTGTTTTTATGGGATAATCGTGTTCAGGTCAGCTTATGCACAACTCGACTATTCATACGAGACAACTCGTTTGATCCTACAACATTTGAT
TATTAAAGACACTCGTAGTAAATTAGTTTA

Protein sequence

Show/hide protein sequence

MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGS
NHVVQVVVFALICFFIVYMWSKMSRK

CSPI03G45350 (gene) of Cucumber (PI 183967) v1 genome